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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 2
  • golgi 2
  • plasma membrane 6
  • endoplasmic reticulum 2
  • vacuole 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH22559
KRH25388
KRH26793
KRH56121

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 KRH22559 AT1G05200.1 23590882
AT1G05200.1 KRH25388 AT1G05200.1 23590882
AT1G05200.1 KRH26793 AT1G05200.1 23590882
AT1G05200.1 KRH56121 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH22559 Soybean plasma membrane 95.88 95.88
KRH25388 Soybean plasma membrane 72.65 74.46
KRH56121 Soybean plasma membrane 71.7 73.09
VIT_12s0059g02270.t01 Wine grape plasma membrane 67.05 68.72
Solyc07g052400.2.1 Tomato cytosol 58.18 67.94
Solyc05g045650.2.1 Tomato plasma membrane 62.83 67.84
PGSC0003DMT400065539 Potato plasma membrane 67.37 67.8
PGSC0003DMT400013497 Potato plasma membrane 65.36 65.23
CDY06165 Canola plasma membrane 59.24 64.41
Bra015398.1-P Field mustard plasma membrane 63.57 63.3
CDY46839 Canola plasma membrane 63.46 63.2
CDY10044 Canola plasma membrane 62.51 63.05
GSMUA_Achr9P02750_001 Banana plasma membrane 61.03 63.03
CDY49512 Canola plasma membrane 63.36 62.96
GSMUA_Achr9P11690_001 Banana plasma membrane 59.13 62.71
AT1G05200.1 Thale cress plasma membrane 63.36 62.57
Bra005589.1-P Field mustard plasma membrane 62.3 62.43
Bra032480.1-P Field mustard plasma membrane 62.41 61.5
AT2G32390.5 Thale cress plasma membrane 61.77 61.39
GSMUA_Achr6P00460_001 Banana plasma membrane 59.24 60.65
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 57.23 60.29
Os06t0680500-01 Rice cytosol, plasma membrane 55.12 58.65
Zm00001d014451_P001 Maize plasma membrane 58.29 58.29
Zm00001d014458_P001 Maize plasma membrane 56.39 58.04
CDY66698 Canola plasma membrane 54.38 57.93
TraesCS2A01G257200.1 Wheat plasma membrane 56.81 57.91
TraesCS2D01G265700.1 Wheat plasma membrane 56.6 57.88
TraesCS2B01G285400.1 Wheat plasma membrane 56.49 57.65
TraesCS2B01G246200.1 Wheat plasma membrane 54.49 57.59
Zm00001d006508_P003 Maize plasma membrane 56.07 57.53
HORVU2Hr1G045730.6 Barley plasma membrane 56.18 57.45
HORVU1Hr1G086120.3 Barley plasma membrane 56.6 57.45
EER97313 Sorghum plasma membrane 55.97 57.36
TraesCS2D01G226400.1 Wheat plasma membrane 55.97 57.24
KXG20638 Sorghum plasma membrane 57.87 57.08
TraesCS7A01G455200.1 Wheat plasma membrane 56.28 57.07
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 56.28 57.01
CDX84735 Canola plasma membrane 53.33 56.87
EER90229 Sorghum plasma membrane 55.54 56.8
TraesCS1A01G390300.2 Wheat plasma membrane 56.18 56.72
CDY48271 Canola plastid 44.24 56.7
TraesCS7B01G355500.1 Wheat plasma membrane 55.97 56.68
TraesCS2A01G220700.1 Wheat plasma membrane 55.54 56.68
TraesCS1B01G418500.1 Wheat plasma membrane 55.86 56.46
TraesCS1D01G398500.1 Wheat plasma membrane 55.76 56.41
KXG20640 Sorghum plasma membrane 54.49 55.48
Zm00001d018614_P003 Maize plastid 56.07 55.37
TraesCS7D01G444100.2 Wheat plasma membrane 56.28 55.18
Zm00001d014456_P001 Maize plasma membrane 53.64 54.92
EER95720 Sorghum plastid 55.97 54.47
KRH14012 Soybean plasma membrane 51.64 53.44
CDY12211 Canola plasma membrane 50.05 53.32
KRH60898 Soybean plasma membrane 51.85 53.08
KRH51581 Soybean plasma membrane 51.95 52.96
Os07t0103100-01 Rice plasma membrane 53.43 52.93
Zm00001d018615_P001 Maize plasma membrane 53.43 52.71
KRH07800 Soybean plasma membrane 49.42 51.09
KRH39417 Soybean golgi, plasma membrane, plastid 49.42 50.32
KRH76527 Soybean plasma membrane 49.63 50.11
KRH39414 Soybean plasma membrane 49.84 50.11
KRH39412 Soybean plasma membrane 49.74 49.74
EER95721 Sorghum plastid 51.43 49.64
KRH28939 Soybean plasma membrane 49.1 49.57
KRH22563 Soybean plasma membrane 44.77 46.64
KRH26791 Soybean plasma membrane 44.03 45.87
KRH74102 Soybean cytosol, nucleus, peroxisome 30.62 44.68
KRH50532 Soybean plasma membrane 28.51 33.42
KRH50533 Soybean plasma membrane 27.77 32.79
KRH55155 Soybean plasma membrane 11.62 32.45
KRH05679 Soybean plasma membrane 18.9 31.96
KRH20347 Soybean nucleus 26.72 29.76
GSMUA_Achr5P00750_001 Banana mitochondrion 58.61 29.65
KRH50147 Soybean plasma membrane 27.56 29.03
KRH21332 Soybean plasma membrane 28.62 28.86
KRH07011 Soybean plasma membrane 24.29 28.29
KRH22012 Soybean cytosol 25.55 28.21
KRH55157 Soybean cytosol 23.76 27.74
KRH15368 Soybean plasma membrane 25.45 27.48
KRH55152 Soybean plasma membrane 24.5 27.04
KRH07014 Soybean golgi, plasma membrane 24.39 26.16
KRH55154 Soybean cytosol 1.9 25.71
KRH07010 Soybean mitochondrion 24.92 25.71
KRH21326 Soybean plasma membrane 25.13 25.7
KRH21331 Soybean plasma membrane 24.6 25.49
KRH55158 Soybean plasma membrane 24.71 15.62
Protein Annotations
Gene3D:1.10.287.70EntrezGene:100799912MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300EMBL:ACUP02007748
InterPro:ANF_lig-bd_rcptncoils:CoilEnsemblPlantsGene:GLYMA_12G194200GO:GO:0003674GO:GO:0004871GO:GO:0004970
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023
UniProt:I1LU57InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnProteinID:KRH26792.1EnsemblPlants:KRH26793ProteinID:KRH26793
ProteinID:KRH26793.1PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176
PANTHER:PTHR43891PANTHER:PTHR43891:SF12InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI000233C889SEG:seg::
Description
hypothetical protein
Coordinates
chr12:+:35592309..35598542
Molecular Weight (calculated)
105828.0 Da
IEP (calculated)
8.532
GRAVY (calculated)
-0.049
Length
947 amino acids
Sequence
(BLAST)
001: MEVLWVTRHG RMFEGRVLLL LVLFLWIPTQ VVVGRTRATI TNSTTSSAPR VLRVGVLFTL NSIIGRSAKP ALMAAFEDVN ADSSVLPGIR LEVILHDTNC
101: SGFVGTMEAL QLMEDEVVAA IGPQSSGIAH VISHVVNELH VPLVSFGATD PSLSSLQYPY FVRSTQSDHY QMYAIADLVD YYRWREVIAI YVDDDNGRNG
201: ISVLGDALSK KRAKISYKAA FPPGALKKDI SDLLNGVNLM ESRVFILHVN PETFLNIFSI ADKLGMMNSG YVWIATDALA STLDSLEPVD PNTMNLLQGI
301: LVLRHHTPDT NEKKSFLSRL KRLKTKETPS FNSYALYAYD TVWLVARALD AFLKKGSVVS FSSDPKLQDT NGSMLHLQSL RVFNDGPTFL ETILSTNFTG
401: LTGTVQFDIE RNRIHPAYDI LNIGGSGMRR VGYWSNYSGL SVVTPEILYK KPPNTSTSSQ QLYGVIWPGE TAAKPRGWVF PNNGKPLRIA VPNRVSYKEF
501: VSKDKNPPGV RGYCIDVFEA AINLLPYPVP REYILFGPGN RNPSYDDLAS QVALNNYDAA VGDVTIVPNR TRFLDFTQPY MESGLVVVVP VKEIKSSPWS
601: FLKPFTAQMW CVTGAFFIFV GTVVWILEHR HNPEFRGRPR KQLMTVFWFS FSTMFFSHRE NTVSGLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS
701: QIEGIDSLIS GTQPIGIQEG SFARKYLTEE LNIQPSRIVT LKNMEAYIDA LEKGPKDGGV VAVVDELPYI EILMSSTNCK FRTVGQEFTK SGWGFAFQRD
801: SPLAVDMSTA ILQLSENGDL QKIHDKWLLK RDCSAPDSDA DLNKLSLGSF WGLFLISGIA CLLALVTFFI RVLCQYTKFS PEPEQDDEEI SPNRPTKSKG
901: LFRSTTSFRD LIYFVDKKEK EIKDILRQKS KKRRRSLSSD GQSSSPT
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.