CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
PProwler:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55157	Soybean	cytosol	83.48	34.9
KRH55152	Soybean	plasma membrane	83.78	33.1
KRH22012	Soybean	cytosol	59.88	23.66
KRH55158	Soybean	plasma membrane	92.63	20.96
KRH05679	Soybean	plasma membrane	25.66	15.54
KRH20347	Soybean	nucleus	36.28	14.47
KRH15368	Soybean	plasma membrane	37.17	14.37
KRH50147	Soybean	plasma membrane	38.05	14.35
KRH07011	Soybean	plasma membrane	34.22	14.27
KRH50533	Soybean	plasma membrane	33.63	14.21
KRH07010	Soybean	mitochondrion	37.76	13.94
KRH74102	Soybean	cytosol, nucleus, peroxisome	26.25	13.71
KRH07014	Soybean	golgi, plasma membrane	35.4	13.59
KRH21332	Soybean	plasma membrane	36.87	13.31
KRH50532	Soybean	plasma membrane	31.27	13.12
KRH21326	Soybean	plasma membrane	34.22	12.53
KRH21331	Soybean	plasma membrane	33.33	12.36
KRH14012	Soybean	plasma membrane	33.04	12.24
KRH56121	Soybean	plasma membrane	33.04	12.06
VIT_19s0014g01770.t01	Wine grape	cytosol	56.05	12.02
KRH25388	Soybean	plasma membrane	32.45	11.9
KRH60898	Soybean	plasma membrane	32.45	11.89
KRH51581	Soybean	plasma membrane	32.15	11.73
KRH22559	Soybean	plasma membrane	32.74	11.72
KRH22563	Soybean	plasma membrane	31.27	11.66
KRH26793	Soybean	plasma membrane	32.45	11.62
KRH07800	Soybean	plasma membrane	31.27	11.57
KRH26791	Soybean	plasma membrane	30.97	11.55
KRH39414	Soybean	plasma membrane	31.56	11.36
KRH39417	Soybean	golgi, plasma membrane, plastid	30.68	11.18
KRH39412	Soybean	plasma membrane	30.97	11.09
KRH28939	Soybean	plasma membrane	30.68	11.09
KRH76527	Soybean	plasma membrane	30.68	11.09
KRH55154	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	UniProt:A0A0R0JSN9	EMBL:ACUP02003906	EnsemblPlantsGene:GLYMA_06G2337001
GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235
GO:GO:0038023	InterPro:Iontro_rcpt	EnsemblPlants:KRH55155	ProteinID:KRH55155	ProteinID:KRH55155.1	PFAM:PF00060
PFAM:PF00497	PANTHER:PTHR43891	PANTHER:PTHR43891:SF1	SMART:SM00079	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	UniParc:UPI0006ED91A0	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:37446069..37448354

Molecular Weight (calculated)

37964.5 Da

IEP (calculated)

8.870

GRAVY (calculated)

0.253

Length

339 amino acids

Sequence
(BLAST)

001: YDAVVGDVTI VSTRYEYASF TQPFTDTGLV MVVPVKSKTG GRTWLFMKPF TKLMWILILV IIFYNGFVVW MIERNHCPEL KGPILHQTTT MLWLAFCSLF
101: SLNGDRLHSN LSRVAMVVWF FVALIITQIY TASLASMLIV EQFEPTVDSI QQLKNNNAIV GCDRGSYLQR YLQDALGINA ENIKQFDSQE SHANALRNKK
201: IAAVFLDVPG AKIFLAKYCK GFVQAGPIYK LGGYGFVFPR GSPLLPGVNQ ALLNISESGT LRDLENSMLA SEKCKDIIDP GAETTSLSPA SFMVLFILTG
301: GTSTTALLIY IFSESYLWPG QRTMWSLMMA VIKHWRSQK

Best Arabidopsis Sequence Match ( AT4G35290.1 )
(BLAST)

001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI

Arabidopsis Description

GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.