CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
golgi 4
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26791	Soybean	plasma membrane	94.5	94.5
VIT_12s0059g02260.t01	Wine grape	plasma membrane	64.14	64.14
Solyc07g052390.2.1	Tomato	nucleus	57.98	60.78
PGSC0003DMT400065543	Potato	plasma membrane	59.08	59.01
GSMUA_Achr5P00740_001	Banana	plasma membrane	52.81	55.88
AT2G32400.1	Thale cress	plasma membrane	55.23	54.51
CDX84734	Canola	plasma membrane	54.9	53.89
Bra005591.1-P	Field mustard	plasma membrane	54.24	53.47
CDY66699	Canola	plasma membrane	54.46	53.46
CDY48270	Canola	plasma membrane	54.13	53.36
CDY12210	Canola	plasma membrane	53.8	53.09
CDY15337	Canola	plasma membrane	51.82	52.68
KRH60898	Soybean	plasma membrane	50.38	49.51
KRH51581	Soybean	plasma membrane	50.38	49.3
KRH07800	Soybean	plasma membrane	47.52	47.16
KRH14012	Soybean	plasma membrane	46.75	46.45
KRH76527	Soybean	plasma membrane	47.63	46.16
KRH28939	Soybean	plasma membrane	47.08	45.63
KRH56121	Soybean	plasma membrane	46.31	45.32
KRH39412	Soybean	plasma membrane	47.19	45.3
KRH39417	Soybean	golgi, plasma membrane, plastid	46.31	45.27
KRH25388	Soybean	plasma membrane	45.98	45.24
KRH39414	Soybean	plasma membrane	46.86	45.22
KRH22559	Soybean	plasma membrane	46.64	44.77
KRH26793	Soybean	plasma membrane	46.64	44.77
KRH74102	Soybean	cytosol, nucleus, peroxisome	28.49	39.91
KRH50532	Soybean	plasma membrane	28.05	31.56
KRH50533	Soybean	plasma membrane	27.61	31.3
KRH55155	Soybean	plasma membrane	11.66	31.27
KRH22012	Soybean	cytosol	27.39	29.02
KRH55154	Soybean	cytosol	2.2	28.57
KRH05679	Soybean	plasma membrane	17.27	28.04
KRH20347	Soybean	nucleus	25.85	27.65
KRH55152	Soybean	plasma membrane	25.96	27.51
KRH21332	Soybean	plasma membrane	28.27	27.37
KRH50147	Soybean	plasma membrane	27.06	27.36
KRH07011	Soybean	plasma membrane	24.42	27.31
KRH55157	Soybean	cytosol	24.09	27.0
Bra022887.1-P	Field mustard	plasma membrane	54.57	26.71
KRH15368	Soybean	plasma membrane	24.97	25.88
KRH07014	Soybean	golgi, plasma membrane	25.08	25.82
KRH21331	Soybean	plasma membrane	25.52	25.38
KRH21326	Soybean	plasma membrane	25.52	25.05
KRH07010	Soybean	mitochondrion	25.19	24.95
KRH55158	Soybean	plasma membrane	25.19	15.29

Protein Annotations

Gene3D:1.10.287.70	EntrezGene:100784247	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	EMBL:ACUP02008421
InterPro:ANF_lig-bd_rcpt	EnsemblPlantsGene:GLYMA_13G308500	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	UniProt:I1M440
InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	EnsemblPlants:KRH22563	ProteinID:KRH22563	ProteinID:KRH22563.1	PFAM:PF00060
PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF15
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	UniParc:UPI000233C05B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:40413588..40418781

Molecular Weight (calculated)

101093.0 Da

IEP (calculated)

8.287

GRAVY (calculated)

0.109

Length

909 amino acids

Sequence
(BLAST)

001: MKKFMVLHLL TWIWLCGVAH SGRPASVNIG AVFSFDSIIG RAAKTAMEMA VSDVNEDPTV LMGTKLNLIM KDAMCNAFLG SIGAFQVLEK GVAAIIGPQS
101: SAVAHTVSQI ADALQVPLVS YAATDPTLSS LQFPFFIRTT QSDLAQMTAM ADIIDFHGWK EVIVVFLDDD YGRNGLSALS DELEKRKLKI SYKLPLSIKF
201: DLDEITNLLN QSKVVGPRVY VVHVNPDPRL RIFFIAHKLQ MMAKDYVWLV TDWLSATLDS LSPVNQTSFS VLQGVVGLRQ HIPDSSKKRA FVSRWIKMQK
301: EGLANTGLNS YGIYAYDTVW AVARAIDIFI KVHNNITFSL PDNYNLSHTV GIGILLDKLK IFAGGSDLVD ILLQSNFTGV SGQLHFNSDR SIVSGGYDII
401: NVNQMGISGV GFWSNNSGFS VVPPTALKKR KYNRFSQDQK LGKVIWPGGV TDQPRGWVIA DNTKPLRIGV PKRASFVEFV TELPDSHQIQ GYCIDVFKKA
501: LEFIPYEVPF VFKPFGNGKE NPNYDALVKM VDENVYDAVV GDIAIVTNRT MIVDFSQPFA SSSLVIVAPI NKARSNAWVF LQPFTADMWC ATAASFLVVG
601: VVIWILEHRV NNDFRGPPKK QLLTMLMFSL STLFKKNQED TVSSLSKMVM IVWLFLLMVI TASYTASLTS ILTVEQLSSP ITGIDSLIAS NWPIGFQVGS
701: FTYNYLTDNL YVSKSRLISL GSPEEYATAL KKGPSGGGVA AIIDELPYVE LFLSNETDFG IIGQPFARSS WGFAFQRESP LAFDMSTAIL KLSENGDLRK
801: IHEKWFCKMR CPEDRTSNSK PDQLHLISFW GLYLSCGIVS LVALALFLLR MIRQYARFKQ RQKNVASSSP EPSGIHCSQV VVNFFNFIDE KEEAIKKMFT
901: QCDNHQNPN

Best Arabidopsis Sequence Match ( AT2G32400.1 )
(BLAST)

001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N

Arabidopsis Description

GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.