Factsheet for GSMUA_Achr5P00740_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g02260.t01	Wine grape	plasma membrane	58.56	55.34
Solyc07g052390.2.1	Tomato	nucleus	54.71	54.21
PGSC0003DMT400065543	Potato	plasma membrane	56.34	53.19
KRH22563	Soybean	plasma membrane	55.88	52.81
KRH26791	Soybean	plasma membrane	55.65	52.59
GSMUA_Achr5P19180_001	Banana	plasma membrane	51.34	49.0
GSMUA_Achr9P11690_001	Banana	plasma membrane	50.76	48.82
GSMUA_Achr3P27050_001	Banana	plasma membrane	51.92	48.74
GSMUA_Achr9P02750_001	Banana	plasma membrane	51.46	48.2
GSMUA_Achr9P23900_001	Banana	plasma membrane	51.34	48.04
GSMUA_Achr9P30180_001	Banana	mitochondrion, plasma membrane	49.94	47.72
AT2G32400.1	Thale cress	plasma membrane	51.11	47.67
CDY12210	Canola	plasma membrane	50.87	47.45
Bra005591.1-P	Field mustard	plasma membrane	50.76	47.29
CDY48270	Canola	plasma membrane	50.52	47.07
CDY15337	Canola	plasma membrane	48.78	46.87
CDX84734	Canola	plasma membrane	50.17	46.54
CDY66699	Canola	plasma membrane	50.17	46.54
GSMUA_Achr6P00460_001	Banana	plasma membrane	49.83	46.27
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	24.56	31.92
GSMUA_AchrUn_...	Banana	golgi	31.43	31.69
GSMUA_Achr6P01870_001	Banana	cytosol	31.66	31.05
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	26.19	30.86
GSMUA_Achr3P04970_001	Banana	plasma membrane	32.83	29.47
GSMUA_Achr4P02110_001	Banana	cytosol	27.47	29.21
GSMUA_Achr2P15450_001	Banana	plasma membrane	25.96	28.05
GSMUA_Achr9P13570_001	Banana	plasma membrane	29.34	27.63
GSMUA_Achr4P30920_001	Banana	plasma membrane	25.03	27.35
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	28.41	25.26
Bra022887.1-P	Field mustard	plasma membrane	50.06	23.16
GSMUA_Achr5P00750_001	Banana	mitochondrion	50.06	22.97

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:GPCR_3
EnsemblPlantsGene:GSMUA_Achr5G00740_001	EnsemblPlants:GSMUA_Achr5P00740_001	EnsemblPlants:GSMUA_Achr5T00740_001	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	UniProt:M0SUK3
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PRINTS:PR01176
PANTHER:PTHR43891	PANTHER:PTHR43891:SF15	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850
SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000296AED9	SEG:seg	:

Description

Glutamate receptor 3.4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G00740_001]

Coordinates

chr5:+:430418..438101

Molecular Weight (calculated)

94744.3 Da

IEP (calculated)

6.332

GRAVY (calculated)

0.195

Length

859 amino acids

Sequence
(BLAST)

001: MDCGGVLWFL LLLATGFGVF AGAERPAVVN IGAVLTYDSV IGRVAKAAIE AAVADVNANA SVLGGTRLNL VMRDANCSVF LGSAAALSVL EHDAIALIGP
101: QSSAIAHMIS SISGGLQIPL ISFAATDPTL SSSQFPFFVR TTHCDSYQMA AMADLIEYFG WRQVIAIYVD DDYGRNGIYY LDDELAENMS KMYKIALPVK
201: ATRNKLIDLL QKSKTLGPRV YVVHATPDAG LNIFSVAEQL HMMTDGYVWL ATDWLSTVLD TSQTVASNSI SYLQGVVSFR QYIPRSNQKE AFVSRWGELQ
301: KEGLVSLNLS TYGFFAYDTV WATAHAINDF LNEYENITFS SNSNLQSIKG KMRLGMLKTF DGGHLLIKKL LLLNFTGLSG QIQFDGDKNL ISRMYEIVNV
401: RGSVTNRVGY WSNHSGLSIS LPENLLINRP KNLSFTQVLG RITWPGGKTE TPRGWVVASN ERPLRIAVPN RASYLEFVRV TNGGDMENVS GYCIDVFKEI
501: MKLIPYEVPY KFVPIGNGQT NPNYDELVNM VVQHVVDAAI GDIAIVTSRS RNSDFTQPYI CTGLVILAPI RSIKSSAWVF LRPFTVGMWC VTGAFFFVVG
601: VVIWLLEHRV NSDFRGPPTR QCITMFLFSF STPFQSQQEE ILSTLGRFVM MVWLFLLMVI TSSYTASLTS FLTVQKLSSP IKGIDSLIAS NEPIGYQEGS
701: FARSYLVDGL NVQPSRLVSL GSPEAYKEAL ERGPENGGVA AIVDELPYVE LFVAKTSGFG IIGQSFTRNG WGFAFPRDSP LAIDMSTAML KLSENGELQR
801: IHKKWFCNTS CIVQSGINSE PDQLHFNSFW GLFLVCGVAT VASLIFPFSL CQDILDHFV

Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)

001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT

Arabidopsis Description

GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.