CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84734	Canola	plasma membrane	96.0	96.0
CDY12210	Canola	plasma membrane	86.39	86.86
CDY48270	Canola	plasma membrane	86.39	86.77
AT2G32400.1	Thale cress	plasma membrane	86.07	86.54
CDY15337	Canola	plasma membrane	78.94	81.77
VIT_12s0059g02260.t01	Wine grape	plasma membrane	53.78	54.79
KRH26791	Soybean	plasma membrane	53.67	54.68
KRH22563	Soybean	plasma membrane	53.46	54.46
Solyc07g052390.2.1	Tomato	nucleus	48.16	51.44
PGSC0003DMT400065543	Potato	plasma membrane	50.22	51.1
GSMUA_Achr5P00740_001	Banana	plasma membrane	46.54	50.17
Bra022887.1-P	Field mustard	plasma membrane	95.9	47.82
CDY71348	Canola	golgi, plasma membrane	12.53	43.77
CDX75491	Canola	cytosol, plasma membrane, plastid	9.5	43.14
CDX73718	Canola	plasma membrane	41.25	42.87
CDX78008	Canola	plasma membrane	41.25	42.87
CDY06165	Canola	plasma membrane	40.28	42.82
CDX69127	Canola	plasma membrane	41.47	42.11
CDY10044	Canola	plasma membrane	42.66	42.07
CDY46839	Canola	plasma membrane	43.2	42.06
CDY35797	Canola	plasma membrane	37.26	41.97
CDY49512	Canola	plasma membrane	43.09	41.87
CDY24327	Canola	plasma membrane	41.04	41.67
CDX76331	Canola	plasma membrane	40.93	41.65
CDY52597	Canola	plasma membrane	40.93	41.56
CDY65624	Canola	plasma membrane	38.77	41.26
CDX95758	Canola	cytosol	17.28	39.31
CDX80728	Canola	cytosol	10.04	38.43
CDY66698	Canola	plasma membrane	36.39	37.91
CDY48271	Canola	plastid	30.02	37.62
CDY68928	Canola	extracellular, plasma membrane	21.6	37.52
CDY70557	Canola	extracellular, plasma membrane	21.6	37.52
CDX84735	Canola	plasma membrane	35.53	37.05
CDX75490	Canola	extracellular, plasma membrane, vacuole	22.35	35.57
CDY12211	Canola	plasma membrane	33.48	34.87
CDY31759	Canola	cytosol, peroxisome, plasma membrane	15.77	31.0
CDX72325	Canola	plasma membrane	21.81	29.97
CDY00544	Canola	plasma membrane	25.16	29.91
CDY70035	Canola	cytosol, plasma membrane	25.81	29.54
CDY31756	Canola	cytosol, peroxisome, plastid	27.32	29.15
CDY51113	Canola	plasma membrane	26.89	28.99
CDY58212	Canola	cytosol, plasma membrane	26.03	28.9
CDY54213	Canola	plasma membrane	27.65	28.8
CDY36173	Canola	plasma membrane	25.05	28.78
CDX85724	Canola	plasma membrane	26.46	28.52
CDY45595	Canola	plasma membrane	26.24	28.26
CDY31755	Canola	cytosol	27.86	27.95
CDX73196	Canola	cytosol, peroxisome, plasma membrane	27.0	27.38
CDY56837	Canola	plasma membrane	27.11	27.34
CDY39533	Canola	plasma membrane	28.62	27.29
CDY38574	Canola	plasma membrane	28.4	27.2
CDY50141	Canola	plasma membrane	15.23	26.6
CDY68132	Canola	plasma membrane	28.08	25.77
CDY13449	Canola	cytosol	26.46	25.55
CDY63640	Canola	cytosol	12.53	21.36
CDY72467	Canola	cytosol	0.11	1.35

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	GO:A0A078JIZ9	UniProt:A0A078JIZ9
InterPro:ANF_lig-bd_rcpt	EnsemblPlants:CDY66699	ProteinID:CDY66699	ProteinID:CDY66699.1	GO:GO:0003674	GO:GO:0004871
GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0007154	GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:GPCR_3	EnsemblPlantsGene:GSBRNA2T00055596001	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248
PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF15	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI0004EF34F7	SEG:seg

Description

BnaCnng51950DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078JIZ9]

Coordinates

chrLK035416:-:4261..8310

Molecular Weight (calculated)

103503.0 Da

IEP (calculated)

8.560

GRAVY (calculated)

0.078

Length

926 amino acids

Sequence
(BLAST)

001: MGLSIDPSVA IMALIVAILV VPMGCQRPKV VNVGAVFTFD SVIGRAAKVA LEAAVSDVNA DRSVLKETEL RLFMEGSSCN VFHGSFGAFK VLDKEVVAMI
101: GPLSSSIAHT LSDIAKGLQF PLVSFAATDP TLSALQFPFF LRTTPDDAHQ MSALVDFITF HGWKEVISVY SDDELGRNGV SALDDELYKK RSRISHKVPL
201: SVHSEEGSVT DALKKSKSLG PRVYVLHFGP DPLLRIFRIA QKLQMMTREY VWLATDWLSV TLDSSLIDKG TLKGLEGVVG LRQHIPQSLK VHQLTHKLKS
301: NGSMNAYALH AYDTVWMIAY GIEKMLNEGI NITFSYSEKL LHAEGTKLHL ERVKIFNSGK VLLEKLLQVN FTGIAGQVRF GSGRNVIGCD YEIINVGKTG
401: VNTVGFWSRN GGFSVVPPDS RHTHKKTGFV SDEKLGNITW PGGGREKPRG WVIADSASPL KIVVPNRVSF VEFVTEENNS SHQIKGLCID IFKEALKFVP
501: YSVPYIFESF GDGHSSPNYK HIIQMVTDGV YDAAVGDFAI VPTRSKLVDF SQPYASTGLV VVIPTNDDNP TWIFLRPFTI GLWCVVLASF LIIAVVIWIL
601: EHRINEDFRG PPRKQLITMI LFSFSTLFKR NQEDTISNLA RLVMIVWLFL LMVLTASYTA NLTSILTVLQ LPSAITGIDS LRESEVPIGY QAGTFTLEYL
701: TYSLGMARSR LVPLDSTEEY ERALKLGPTA FGGVAAIVDE LPYIELFLAE RTGFKIVGEP FMHRGWGFAF KRDSPLAIDM SRAILKLSET RKLQEIRMKW
801: LCKKTCAEKS DGNPEPNQLH LKSFKGLYLV CTAISVSASL VFVFRMVRQF VRYRRMERTS SMPLASWSSS PTMRLRELVF GFVEFVDEKE EAIKRMFRRS
901: NDSDNPFHVV EVQADPEFRC FFLNHL

Best Arabidopsis Sequence Match ( AT2G32400.1 )
(BLAST)

001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N

Arabidopsis Description

GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.