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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75491 Canola cytosol, plasma membrane, plastid 63.77 82.84
CDX80728 Canola cytosol 42.64 46.69
CDX76331 Canola plasma membrane 100.0 29.12
CDY65624 Canola plasma membrane 87.92 26.78
Bra020812.1-P Field mustard plasma membrane 98.49 25.74
CDX69127 Canola plasma membrane 85.66 24.89
AT4G35290.2 Thale cress plasma membrane 84.15 24.45
KRH74102 Soybean cytosol, nucleus, peroxisome 54.34 22.19
CDY24327 Canola plasma membrane 75.09 21.82
CDY52597 Canola plasma membrane 75.09 21.82
CDY31759 Canola cytosol, peroxisome, plasma membrane 32.45 18.26
CDY35797 Canola plasma membrane 56.23 18.13
KRH14012 Soybean plasma membrane 60.75 17.6
HORVU0Hr1G018770.1 Barley plasma membrane 52.08 17.19
VIT_03s0038g03920.t01 Wine grape plasma membrane 58.87 17.01
GSMUA_Achr9P23900_001 Banana plasma membrane 58.11 16.78
GSMUA_Achr3P27050_001 Banana plasma membrane 55.47 16.07
CDY50141 Canola plasma membrane 32.08 16.04
TraesCS6B01G065400.1 Wheat plasma membrane 55.85 15.98
TraesCS6A01G048700.1 Wheat plasma membrane 55.47 15.87
TraesCSU01G107700.2 Wheat plasma membrane 55.09 15.77
Zm00001d015007_P003 Maize plasma membrane 53.58 15.76
TraesCS6B01G066200.1 Wheat plasma membrane 54.72 15.74
TraesCSU01G108800.1 Wheat plasma membrane 54.72 15.71
Os02t0117500-01 Rice plasma membrane 55.85 15.68
GSMUA_Achr5P19180_001 Banana plasma membrane 53.21 15.67
TraesCS6A01G049900.1 Wheat plasma membrane 54.34 15.6
HORVU6Hr1G009520.1 Barley plasma membrane 54.34 15.55
HORVU0Hr1G036590.3 Barley plasma membrane 54.34 15.43
HORVU2Hr1G049510.4 Barley plasma membrane 54.34 15.43
TraesCSU01G107900.1 Wheat plasma membrane 53.58 15.33
TraesCS6B01G065700.1 Wheat plasma membrane 53.21 15.28
CDY06165 Canola plasma membrane 50.19 15.27
TraesCSU01G108000.1 Wheat plasma membrane 53.21 15.26
TraesCS6A01G048800.1 Wheat plasma membrane 53.21 15.23
KXG29299 Sorghum plasma membrane 53.21 15.23
TraesCS6B01G065500.1 Wheat plasma membrane 53.21 15.23
CDX73718 Canola plasma membrane 50.57 15.04
TraesCS6A01G049000.1 Wheat plasma membrane 52.45 14.93
CDX78008 Canola plasma membrane 50.19 14.93
Zm00001d054016_P004 Maize plasma membrane 52.83 14.72
TraesCS2B01G477300.4 Wheat plasma membrane 50.94 14.69
TraesCS2A01G455200.2 Wheat plasma membrane 50.57 14.58
TraesCS2D01G455600.2 Wheat plasma membrane 50.57 14.58
HORVU2Hr1G104920.3 Barley plasma membrane 51.7 14.42
KXG26996 Sorghum plasma membrane 50.19 14.22
OQU84212 Sorghum mitochondrion 48.68 14.19
Zm00001d002532_P003 Maize plasma membrane 49.43 14.07
CDY10044 Canola plasma membrane 49.81 14.06
CDY48271 Canola plastid 38.49 13.8
CDY46839 Canola plasma membrane 49.06 13.67
CDY49512 Canola plasma membrane 49.06 13.64
CDX84734 Canola plasma membrane 44.15 12.63
CDY48270 Canola plasma membrane 43.77 12.58
CDY66699 Canola plasma membrane 43.77 12.53
CDY12210 Canola plasma membrane 43.4 12.49
CDY12211 Canola plasma membrane 40.75 12.15
CDX84735 Canola plasma membrane 40.38 12.05
CDY66698 Canola plasma membrane 40.38 12.04
CDY15337 Canola plasma membrane 40.0 11.86
PGSC0003DMT400038012 Potato plasma membrane 54.34 11.73
CDY70035 Canola cytosol, plasma membrane 32.83 10.75
CDY31756 Canola cytosol, peroxisome, plastid 33.21 10.14
CDY58212 Canola cytosol, plasma membrane 31.32 9.95
CDX72325 Canola plasma membrane 23.02 9.05
CDY31755 Canola cytosol 31.32 8.99
CDY51113 Canola plasma membrane 27.92 8.61
CDY39533 Canola plasma membrane 31.32 8.55
CDY56837 Canola plasma membrane 29.06 8.39
CDX85724 Canola plasma membrane 27.17 8.38
CDY38574 Canola plasma membrane 30.57 8.38
CDX73196 Canola cytosol, peroxisome, plasma membrane 27.17 7.89
CDY54213 Canola plasma membrane 25.28 7.54
CDY36173 Canola plasma membrane 22.26 7.32
CDY68132 Canola plasma membrane 27.55 7.23
CDY45595 Canola plasma membrane 23.4 7.21
CDY00544 Canola plasma membrane 21.13 7.19
CDY13449 Canola cytosol 24.53 6.78
CDX75490 Canola extracellular, plasma membrane, vacuole 5.28 2.41
Os02t0117600-01 Rice plastid 0.38 0.41
CDY70557 Canola extracellular, plasma membrane 0.75 0.38
CDY68928 Canola extracellular, plasma membrane 0.75 0.38
Os04t0585200-02 Rice extracellular 0.75 0.37
CDY63640 Canola cytosol 0.75 0.37
CDX95758 Canola cytosol 0.0 0.0
Zm00001d033769_P001 Maize golgi, plasma membrane 0.0 0.0
CDY72467 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10GO:A0A078JUX2UniProt:A0A078JUX2EnsemblPlants:CDY71348
ProteinID:CDY71348ProteinID:CDY71348.1GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215
GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00014223001InterPro:Iontro_rcptPFAM:PF00060
PFAM:PF00497PANTHER:PTHR43891PANTHER:PTHR43891:SF18SMART:SM00079SUPFAM:SSF53850SignalP:SignalP-TM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EF1F5BSEG:seg::
Description
BnaAnng37040DBnaAnng37040D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUX2]
Coordinates
chrLK045458:+:3..874
Molecular Weight (calculated)
29790.8 Da
IEP (calculated)
7.099
GRAVY (calculated)
-0.049
Length
265 amino acids
Sequence
(BLAST)
001: GRVVLLIWLF VVLIITSSYT ASLTSILTVQ QLNSPIKGVD TLMSSSERVG FQVGSYAENY MIDELNIARS RLVALGSPKE YATALQNGTV SAIVDERPYV
101: DLFLSEFCGF AIRGQAFTRS GWGFAFPRDS PLAVDMSTAI LGLSETGQLQ KIREKWLSKS NCSNLNGSHS DDDQEQLGLH SFWGLFLMCG VACFIALLIY
201: FFKIVRDFCN DHKPVEEAIV PSPESSHSNT LHTFLAYFDE KEDKTKRRLK RKRDHELSVK FPRPM
Best Arabidopsis Sequence Match ( AT4G35290.1 )
(BLAST)
001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI
Arabidopsis Description
GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.