Factsheet for TraesCSU01G107900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G048800.1	Wheat	plasma membrane	97.73	97.73
TraesCS6B01G065500.1	Wheat	plasma membrane	97.3	97.3
TraesCSU01G108000.1	Wheat	plasma membrane	92.66	92.86
TraesCSU01G107700.2	Wheat	plasma membrane	87.91	87.91
TraesCSU01G108800.1	Wheat	plasma membrane	85.75	86.02
KXG29299	Sorghum	plasma membrane	80.67	80.67
Os02t0117500-01	Rice	plasma membrane	80.99	79.45
Zm00001d015007_P003	Maize	plasma membrane	77.11	79.25
Zm00001d033769_P001	Maize	golgi, plasma membrane	53.89	79.08
Zm00001d054016_P004	Maize	plasma membrane	79.48	77.39
OQU84212	Sorghum	mitochondrion	71.81	73.16
GSMUA_Achr9P23900_001	Banana	plasma membrane	58.1	58.61
GSMUA_Achr3P27050_001	Banana	plasma membrane	57.78	58.47
VIT_03s0038g03920.t01	Wine grape	plasma membrane	53.56	54.09
Solyc04g082610.2.1	Tomato	plasma membrane	54.1	53.99
VIT_18s0122g00990.t01	Wine grape	plasma membrane	54.43	53.96
KRH60898	Soybean	plasma membrane	53.78	53.84
CDY71348	Canola	golgi, plasma membrane	15.33	53.58
VIT_07s0031g02170.t01	Wine grape	plasma membrane	54.0	53.42
KRH51581	Soybean	plasma membrane	53.56	53.39
PGSC0003DMT400025675	Potato	plasma membrane	53.46	53.17
CDY35797	Canola	plasma membrane	47.19	53.16
KRH39417	Soybean	golgi, plasma membrane, plastid	52.92	52.69
Bra034931.1-P	Field mustard	plasma membrane	52.27	52.1
AT1G42540.2	Thale cress	plasma membrane	52.16	51.77
KRH39414	Soybean	plasma membrane	52.48	51.59
CDX76331	Canola	plasma membrane	50.54	51.43
CDY70557	Canola	extracellular, plasma membrane	29.48	51.22
CDY68928	Canola	extracellular, plasma membrane	29.37	51.03
AT4G35290.2	Thale cress	plasma membrane	50.22	50.99
KRH07800	Soybean	plasma membrane	50.43	50.98
CDY65624	Canola	plasma membrane	47.84	50.92
CDX73718	Canola	plasma membrane	48.92	50.84
CDX69127	Canola	plasma membrane	50.0	50.77
Bra011603.1-P	Field mustard	plasma membrane	50.0	50.71
KRH14012	Soybean	plasma membrane	50.0	50.6
CDY52597	Canola	plasma membrane	49.46	50.22
CDY24327	Canola	plasma membrane	49.35	50.11
KRH76527	Soybean	plasma membrane	50.65	50.0
KRH39412	Soybean	plasma membrane	51.08	49.95
Bra036795.1-P	Field mustard	plasma membrane	48.06	49.94
CDX78008	Canola	plasma membrane	48.06	49.94
KRH28939	Soybean	plasma membrane	50.43	49.79
Solyc02g082480.2.1	Tomato	plasma membrane	51.4	49.69
AT2G17260.1	Thale cress	plasma membrane	49.03	49.08
AT3G51480.1	Thale cress	plasma membrane	47.62	48.84
CDX75491	Canola	cytosol, plasma membrane, plastid	10.58	48.04
CDX80728	Canola	cytosol	12.42	47.52
CDX95758	Canola	cytosol	20.73	47.17
CDX75490	Canola	extracellular, plasma membrane, vacuole	28.4	45.19
KRH74102	Soybean	cytosol, nucleus, peroxisome	29.7	42.37
Bra020812.1-P	Field mustard	plasma membrane	42.76	39.05
PGSC0003DMT400038012	Potato	plasma membrane	48.06	36.24
Os02t0117600-01	Rice	plastid	0.22	0.83

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891
PANTHER:PTHR43891:SF4	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G107900	EnsemblPlants:TraesCSU01G107900.1	TIGR:cd06366	TIGR:cd13686
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:94179603..94183373

Molecular Weight (calculated)

102743.0 Da

IEP (calculated)

6.790

GRAVY (calculated)

0.090

Length

926 amino acids

Sequence
(BLAST)

001: MEISFLMLLV LSLLLFPNGI CKGLAARPPV VNIGSILQFN STTGGVAAVA IHAALEDINS DPTVLNGTTL KVQIKDTNCF DGFLGMVQAL QFMETDVVAL
101: IGPQCSTISH IISYVANELR VPLMSFASDA TLSSIQFPFF VRTGPNDLYQ MAAVAEVVDY NHWKIVTAIY IDNVYGRNGI AALDDALALK RCKISYKVGF
201: PSNAKRSELI NLLVSVSYME SRVIILHTGA EPGLKLFSMA KQLNMMGNGY VWIATDWLSA YLDANSSVPA ETISGLQGVL TLRPHIPNSK MKSNLVSKWN
301: KQSKKSNYSD LRVNTYGFYV YDSVWAVARA LDAFFDDGGR ISFSNDSMLH DETGGTLHLE AMSISDMGNK LLEKIRKVNF TGVSGQVQFD AGGNLIHPAY
401: DIINIIGNGM RTIGFWSNYS GLLSTVSPEA LYSKPPNISL ADQHLYDVIW PGETAQRPRG WVFPSNAKQL KIGVPNRFSF KEFVTKDNST GSMKGYCIDV
501: FTQALALLPY PVSYKFVPFG NGTENPNYDK LVQMIESNEF DAAIGDIAIT MRRTVTLDFT QPFIETGLVI LAPVKQHITS SWAFLQPFTL QMWCVTGSYF
601: LIVGVVVWVL EHRINDDFRG SVRQQIITIF WFSFSTLFFA HRENTMSSSG RGVLIIWLFV VLIIVSSYTA SLTSILTVQQ LDTSIKGIDD LKSSNDPIGF
701: QVGSFAQDYM VKELNISRSR LRALSSPQEY AEALKLGPKE GGVMAIVDER PYVELFLSTY CKIAVAGTDF TSRGWGFAFP RDSPLQVDLS TAILSLSENG
801: ELQRIHDKWL KTGECATDNS EFVDSDQLRL ESFLGLFLIC GVACILALLI YFGIMLRKYL RHDQRKSLRR FISFVHGKDP PKNNERRSMS LLGSSTPATP
901: MSSLTTLEIE RPAREVRNGS VIEMES

Best Arabidopsis Sequence Match ( AT1G42540.2 )
(BLAST)

001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

Arabidopsis Description

GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.