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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71348 Canola golgi, plasma membrane 25.74 98.49
CDX76331 Canola plasma membrane 74.16 82.64
Bra011603.1-P Field mustard plasma membrane 64.2 71.3
AT4G35290.2 Thale cress plasma membrane 63.41 70.5
VIT_03s0038g03920.t01 Wine grape plasma membrane 45.66 50.49
KRH14012 Soybean plasma membrane 44.67 49.51
HORVU0Hr1G018770.1 Barley plasma membrane 38.46 48.57
KRH74102 Soybean cytosol, nucleus, peroxisome 30.08 47.0
GSMUA_Achr9P23900_001 Banana plasma membrane 41.72 46.08
GSMUA_Achr3P27050_001 Banana plasma membrane 41.03 45.46
Bra034931.1-P Field mustard plasma membrane 40.93 44.67
Bra036795.1-P Field mustard plasma membrane 38.46 43.77
TraesCS6A01G048700.1 Wheat plasma membrane 39.55 43.3
TraesCSU01G107700.2 Wheat plasma membrane 39.55 43.3
GSMUA_Achr5P19180_001 Banana plasma membrane 38.26 43.11
Zm00001d015007_P003 Maize plasma membrane 38.26 43.06
TraesCS2B01G477300.4 Wheat plasma membrane 38.95 42.98
TraesCS6B01G065400.1 Wheat plasma membrane 39.25 42.98
Os02t0117500-01 Rice plasma membrane 39.94 42.9
TraesCS6B01G066200.1 Wheat plasma membrane 38.95 42.89
TraesCSU01G108800.1 Wheat plasma membrane 38.95 42.8
TraesCSU01G107900.1 Wheat plasma membrane 39.05 42.76
TraesCS2A01G455200.2 Wheat plasma membrane 38.76 42.76
TraesCS6A01G048800.1 Wheat plasma membrane 38.95 42.66
TraesCS6A01G049900.1 Wheat plasma membrane 38.76 42.58
HORVU6Hr1G009520.1 Barley plasma membrane 38.86 42.55
KXG29299 Sorghum plasma membrane 38.86 42.55
TraesCS2D01G455600.2 Wheat plasma membrane 38.56 42.55
TraesCS6B01G065700.1 Wheat plasma membrane 38.66 42.47
HORVU2Hr1G049510.4 Barley plasma membrane 38.76 42.12
HORVU0Hr1G036590.3 Barley plasma membrane 38.76 42.12
TraesCS6B01G065500.1 Wheat plasma membrane 38.36 42.01
TraesCSU01G108000.1 Wheat plasma membrane 38.26 41.99
KXG26996 Sorghum plasma membrane 38.66 41.93
TraesCS6A01G049000.1 Wheat plasma membrane 38.46 41.89
OQU84212 Sorghum mitochondrion 37.28 41.58
HORVU2Hr1G104920.3 Barley plasma membrane 38.95 41.58
Zm00001d002532_P003 Maize plasma membrane 38.07 41.46
Zm00001d054016_P004 Maize plasma membrane 37.97 40.48
Bra015398.1-P Field mustard plasma membrane 37.97 40.48
Bra032480.1-P Field mustard plasma membrane 37.87 39.96
Bra005589.1-P Field mustard plasma membrane 36.49 39.15
Zm00001d033769_P001 Maize golgi, plasma membrane 22.39 35.97
PGSC0003DMT400038012 Potato plasma membrane 43.1 35.59
Bra005591.1-P Field mustard plasma membrane 31.56 34.71
Os04t0585200-02 Rice extracellular 18.44 34.63
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 19.63 33.56
Bra032072.1-P Field mustard plasma membrane 25.25 28.57
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 25.54 27.73
Bra040760.1-P Field mustard cytosol 22.49 27.08
Bra032063.1-P Field mustard plasma membrane 23.96 26.33
Bra040761.1-P Field mustard cytosol 23.96 26.1
Bra023313.1-P Field mustard plasma membrane 22.09 26.08
Bra015817.1-P Field mustard plasma membrane 21.89 22.0
Bra023989.1-P Field mustard cytosol 21.2 21.83
Bra022887.1-P Field mustard plasma membrane 31.46 17.18
Os02t0117600-01 Rice plastid 0.1 0.41
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptEnsemblPlantsGene:Bra020812
EnsemblPlants:Bra020812.1EnsemblPlants:Bra020812.1-PGO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_plnUniProt:M4DWB8PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF18InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0002545FEESEG:seg::
Description
AT4G35290 (E=0.0) GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | GLUR2 (GLUTAMATE RECEPTOR 2); intracellular ligand-gated ion channel
Coordinates
chrA08:-:11978273..11983391
Molecular Weight (calculated)
113313.0 Da
IEP (calculated)
8.307
GRAVY (calculated)
-0.009
Length
1014 amino acids
Sequence
(BLAST)
0001: MIIYYGWSDV VALYNDDDNS RNGITSLGDE LEGRRCKISY KAVLPLDVVI TSPREIIGEL TKIQGMESRV IIVHTFPKTG RMIFEEAKKL GMMEQGYVWI
0101: ATTWLTSLLD SYSPLPPKKI EAIRGVLTLR IHTRESRKRR DFVARWNKLS NGTVGLNVYG LYAYDTVWII ARAVKSLLDS GANITFSSDS KLTSLKGGTL
0201: NLGALSIFDQ GPQFLEFIVK TKMSGVTGPV QFLPDRSMLQ PAYDIINIVG DGFKQIGYWS NHSGLSVIPP ESLYSKPPNR SSSNQHLYNV TWPGGTSETP
0301: RGWVLPNNGR RLRIGVPNRA SFKDFVSSVN GSNKVEGYSI DVFEAAVKLL PYPVAHEFVL FGDGLKNPNY NELVNNVSTG VFDAVVGDIA IVKRRIRIVD
0401: FTQPYIESGL VVVAAVTKLN DTPWAFLRPF TPPMWAVTAA FFLIIGSVIW VLEHRINDEF RGPPGSQVVT ILWFTFSTMF FSHRENTVST LGRVVLLIWL
0501: FVVLIITSSY TASLTSILTV QQLNSPIKGV DTLMSSSERV GFQVGSYAEN YMIDELNIAR SRLVALGSPK EYATALQNGT VSAIVDERPY VDLFLSEFCG
0601: FAIRGQAFTR SGWGFAFPRD SPLAVDMSTA ILGLSETGQL QKIREKWLSK SNCSNLNGSH SDDDQEQLGL HSFWGLFLMC GVACFIALLI YFFKIVRDFC
0701: NDHKPLEEAI VPSPESSHSN TLHTFLAYFD AKEDKTKRRL KRENTVSTLG RVVLLIWLFV VLIITSSYTA SLTSILTVQQ LNSPIKGVDT LMSSSERVGF
0801: QVGSYAENYM IDELNIARSR LVALGSPKEY ATALQNGTVS AIVDERPYVD LFLSEFCGFA IRGQAFTRSG WGFAFPRDSP LAVDMSTAIL GLSETGQLQK
0901: IREKWLSKSN CSNLNGSHSD DDQEQLGLHS FWGLFLMCGV ACFIALLIYF FKIVRDFCND HKPLEEAIVP SPESSHSNTL HTFLAYFDAK EDKTKRRLKR
1001: KRNHDLSVKF PRPM
Best Arabidopsis Sequence Match ( AT4G35290.4 )
(BLAST)
001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI
Arabidopsis Description
GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.