Factsheet for HORVU2Hr1G104920.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G477300.4	Wheat	plasma membrane	90.74	93.8
TraesCS2D01G455600.2	Wheat	plasma membrane	90.21	93.25
TraesCS2A01G455200.2	Wheat	plasma membrane	90.11	93.14
KXG26996	Sorghum	plasma membrane	70.63	71.76
Zm00001d002532_P003	Maize	plasma membrane	69.26	70.68
Os04t0585200-02	Rice	extracellular	39.79	70.0
GSMUA_Achr5P19180_001	Banana	plasma membrane	60.42	63.78
Solyc04g082610.2.1	Tomato	plasma membrane	56.95	58.3
VIT_18s0122g00990.t01	Wine grape	plasma membrane	56.95	57.92
PGSC0003DMT400025675	Potato	plasma membrane	56.32	57.47
KRH60898	Soybean	plasma membrane	55.79	57.3
KRH51581	Soybean	plasma membrane	55.26	56.51
HORVU0Hr1G018770.1	Barley	plasma membrane	47.16	55.79
HORVU0Hr1G036590.3	Barley	plasma membrane	54.21	55.2
HORVU2Hr1G049510.4	Barley	plasma membrane	54.21	55.2
HORVU6Hr1G009520.1	Barley	plasma membrane	53.79	55.18
VIT_03s0038g03920.t01	Wine grape	plasma membrane	53.16	55.07
VIT_07s0031g02170.t01	Wine grape	plasma membrane	53.68	54.49
AT1G42540.2	Thale cress	plasma membrane	53.47	54.45
CDY35797	Canola	plasma membrane	47.05	54.38
Bra034931.1-P	Field mustard	plasma membrane	52.53	53.71
KRH14012	Soybean	plasma membrane	51.26	53.22
KRH07800	Soybean	plasma membrane	51.05	52.95
KRH39417	Soybean	golgi, plasma membrane, plastid	51.68	52.8
KRH28939	Soybean	plasma membrane	52.11	52.77
KRH76527	Soybean	plasma membrane	51.79	52.45
KRH39414	Soybean	plasma membrane	51.79	52.23
CDY70557	Canola	extracellular, plasma membrane	29.16	51.97
CDY68928	Canola	extracellular, plasma membrane	29.05	51.78
CDY71348	Canola	golgi, plasma membrane	14.42	51.7
CDY52597	Canola	plasma membrane	49.47	51.54
Solyc02g082480.2.1	Tomato	plasma membrane	51.89	51.46
CDX76331	Canola	plasma membrane	49.26	51.43
KRH39412	Soybean	plasma membrane	51.26	51.43
CDX73718	Canola	plasma membrane	48.21	51.4
CDY24327	Canola	plasma membrane	49.26	51.32
AT3G51480.1	Thale cress	plasma membrane	48.63	51.16
HORVU2Hr1G045730.6	Barley	plasma membrane	49.68	50.97
CDX69127	Canola	plasma membrane	48.84	50.88
Bra011603.1-P	Field mustard	plasma membrane	48.84	50.82
CDY65624	Canola	plasma membrane	46.53	50.8
Bra036795.1-P	Field mustard	plasma membrane	47.58	50.73
CDX78008	Canola	plasma membrane	47.58	50.73
AT2G17260.1	Thale cress	plasma membrane	49.37	50.7
AT4G35290.2	Thale cress	plasma membrane	48.42	50.44
HORVU1Hr1G086120.3	Barley	plasma membrane	49.26	50.16
CDX95758	Canola	cytosol	21.26	49.63
HORVU7Hr1G104490.2	Barley	golgi, plasma membrane	48.53	49.3
CDX80728	Canola	cytosol	12.21	47.93
KRH74102	Soybean	cytosol, nucleus, peroxisome	32.74	47.92
CDX75491	Canola	cytosol, plasma membrane, plastid	9.89	46.08
CDX75490	Canola	extracellular, plasma membrane, vacuole	27.37	44.67
Bra020812.1-P	Field mustard	plasma membrane	41.58	38.95
PGSC0003DMT400038012	Potato	plasma membrane	47.58	36.81
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	19.58	34.51
HORVU5Hr1G063490.1	Barley	golgi, vacuole	14.74	32.94
HORVU7Hr1G081410.3	Barley	plasma membrane	18.53	30.77
HORVU7Hr1G031400.1	Barley	plasma membrane	23.37	30.58
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	15.89	30.2
HORVU5Hr1G063500.1	Barley	plasma membrane	29.26	29.92
HORVU6Hr1G083680.5	Barley	plasma membrane	31.79	29.81
HORVU5Hr1G063540.6	Barley	plasma membrane	28.53	29.71
HORVU5Hr1G063430.8	Barley	plasma membrane	28.95	29.29
HORVU5Hr1G010420.17	Barley	plasma membrane	27.58	29.11
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	29.89	29.07
HORVU5Hr1G072170.1	Barley	plasma membrane	24.21	28.82
HORVU6Hr1G083570.16	Barley	plasma membrane	30.84	28.78
HORVU5Hr1G063440.1	Barley	plasma membrane	29.68	28.72
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	30.32	28.37
HORVU5Hr1G063530.5	Barley	plasma membrane	26.74	27.7

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	UniProt:A0A287JAK8	InterPro:ANF_lig-bd_rcpt
GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	EnsemblPlantsGene:HORVU2Hr1G104920	EnsemblPlants:HORVU2Hr1G104920.3	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176
PANTHER:PTHR43891	PANTHER:PTHR43891:SF13	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850
SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000B46FCA7	SEG:seg	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A287JAK8]

Coordinates

chrchr2H:+:704886531..704891584

Molecular Weight (calculated)

104173.0 Da

IEP (calculated)

6.945

GRAVY (calculated)

0.145

Length

950 amino acids

Sequence
(BLAST)

001: MKFTLHFWGL FCCLYALSKN IYARPDTVSV GALFTFNSTI GRAAKIAISA AVNDINKDSS ILPGTNLVVE MQDSNCSGFV GIVQALQFME KDTVAIIGPQ
101: SSVIAHVISH VANELQVPML SFGATDPTLT SLQFPFLVRT TRSDHFQMAA VADLVDYYGW KQVTAIFMDD DYGRNGIASL GDELVKRRAK ILFKAAVRPG
201: AKKSEMASVL IRVALMESRV VILHANPDSG LALLSLARNL GMTSSGYVWI ATDWLSSFLD SSPRLDSGLL STMQGFLTLR QHTENTRRKR MLASKWSALV
301: KKDSVDDQFL INSYGFYTYD TVWILAYALD AFFSSGGNIS FSNDTKLHEV GAGGLQLNAM TVFDGGRLLL ERIHQVNFTG ATGPVKFDTD GNLIRPAYDI
401: INIVGSGLRP VGYWSNYSGL STSSPETLYM KPAKRVRGDQ KLHTVIWPGE TTVKPRGWVF PNNGIELKIG IPNRASYRQF VSADNNTGTV RGFCIDVFLA
501: AANLLPYPVP FKFIPFGNGS QNPSYPELIN SIVTNDFDAV VGDIAIVTNR TRVVDFTQPY VESGLVVLTS VKKQSSSGWA FLQPFTIKMW CVTGLFFLVI
601: GTVVWLLEHR INDDFRGPPV KQVITVFWFS FSTLFFAHRE DTRSTLGRFV IIIWLFVVLI IQSSYTASLT SILTVQQLIS PITGIDSLIA SDEPIGFQVG
701: SFAESYLVNE LGVSRYRLKA LGSPDEYKQA LELGAGNGGV TAIVDERPYV EIFLLQHPKF AVVGSEFTKS GWGFVSFFLS VCLAILASLS ENYDAELNWT
801: LIAQAFPRDS PLAVDLSTSI LALSENGDLQ RIHDKWLAND AAVSMSQNNE LESDRLQVYS FSGLFLICGV ACLVTLAIHA GILVHKYCEQ QRQVSAEGSS
901: RSSRSSFQAF LSFADRREMD TRIASKDKAA GGDHSVGAAS SSSASTAASC

Best Arabidopsis Sequence Match ( AT1G42540.2 )
(BLAST)

001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

Arabidopsis Description

GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.