Factsheet for HORVU7Hr1G104490.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G086120.3
HORVU2Hr1G045730.6
HORVU7Hr1G104490.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05200.1	HORVU1Hr1G086120.3	AT1G05200.1	23590882
AT1G05200.1	HORVU2Hr1G045730.6	AT1G05200.1	23590882
AT1G05200.1	HORVU7Hr1G104490.2	AT1G05200.1	23590882

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G455200.1	Wheat	plasma membrane	96.36	96.47
TraesCS7B01G355500.1	Wheat	plasma membrane	95.61	95.61
TraesCS7D01G444100.2	Wheat	plasma membrane	95.94	92.86
Os06t0680500-01	Rice	cytosol, plasma membrane	76.36	80.22
HORVU1Hr1G086120.3	Barley	plasma membrane	78.07	78.24
GSMUA_Achr9P30180_001	Banana	mitochondrion, plasma membrane	61.93	64.4
VIT_12s0059g02270.t01	Wine grape	plasma membrane	58.5	59.2
Solyc05g045650.2.1	Tomato	plasma membrane	54.97	58.61
Solyc07g052400.2.1	Tomato	cytosol	49.95	57.58
HORVU2Hr1G045730.6	Barley	plasma membrane	56.58	57.13
KRH56121	Soybean	plasma membrane	56.26	56.62
KRH25388	Soybean	plasma membrane	55.94	56.6
KRH26793	Soybean	plasma membrane	57.01	56.28
CDY06165	Canola	plasma membrane	52.41	56.26
KRH22559	Soybean	plasma membrane	56.9	56.18
PGSC0003DMT400065539	Potato	plasma membrane	56.47	56.11
PGSC0003DMT400013497	Potato	plasma membrane	56.47	55.64
CDY46839	Canola	plasma membrane	56.04	55.1
Bra015398.1-P	Field mustard	plasma membrane	55.94	54.99
CDY49512	Canola	plasma membrane	55.83	54.77
CDY10044	Canola	plasma membrane	54.87	54.63
AT1G05200.1	Thale cress	plasma membrane	55.83	54.43
AT2G32390.5	Thale cress	plasma membrane	55.4	54.35
Bra032480.1-P	Field mustard	plasma membrane	54.44	52.97
Bra005589.1-P	Field mustard	plasma membrane	53.05	52.49
HORVU0Hr1G036590.3	Barley	plasma membrane	49.09	49.2
HORVU2Hr1G049510.4	Barley	plasma membrane	49.09	49.2
HORVU6Hr1G009520.1	Barley	plasma membrane	48.34	48.81
HORVU2Hr1G104920.3	Barley	plasma membrane	49.3	48.53
HORVU0Hr1G018770.1	Barley	plasma membrane	41.6	48.44
CDY48271	Canola	plastid	37.22	47.09
CDY66698	Canola	plasma membrane	44.49	46.79
CDX84735	Canola	plasma membrane	44.06	46.4
CDY12211	Canola	plasma membrane	42.25	44.43
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	19.04	33.02
GSMUA_Achr5P00750_001	Banana	mitochondrion	62.99	31.46
HORVU7Hr1G031400.1	Barley	plasma membrane	24.39	31.41
HORVU5Hr1G063500.1	Barley	plasma membrane	31.12	31.32
HORVU7Hr1G081410.3	Barley	plasma membrane	18.5	30.24
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	16.04	30.0
HORVU5Hr1G063540.6	Barley	plasma membrane	29.09	29.82
HORVU6Hr1G083570.16	Barley	plasma membrane	32.09	29.47
HORVU6Hr1G083680.5	Barley	plasma membrane	31.87	29.42
HORVU5Hr1G010420.17	Barley	plasma membrane	28.24	29.33
HORVU5Hr1G072170.1	Barley	plasma membrane	24.92	29.2
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	30.48	29.17
HORVU5Hr1G063530.5	Barley	plasma membrane	28.56	29.12
HORVU5Hr1G063490.1	Barley	golgi, vacuole	13.16	28.94
HORVU5Hr1G063440.1	Barley	plasma membrane	29.73	28.31
HORVU5Hr1G063430.8	Barley	plasma membrane	28.34	28.22
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	29.09	26.8

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	EMBL:AK359974	InterPro:ANF_lig-bd_rcpt
UniProt:F2D7W2	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	EnsemblPlantsGene:HORVU7Hr1G104490	EnsemblPlants:HORVU7Hr1G104490.2
InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF17	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000200598B	SEG:seg

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:F2D7W2]

Coordinates

chrchr7H:-:614679380..614686465

Molecular Weight (calculated)

102306.0 Da

IEP (calculated)

6.874

GRAVY (calculated)

0.076

Length

935 amino acids

Sequence
(BLAST)

001: MGADRLLLLC LALALFAAAA AQRTNPPPRV VSVGALFTYD STIGRAARLA IELAVDDVNA DRAVLAGTTL NLISQDTNCS GFLGTIEALQ LMEKNVVAVI
101: GPQSSGIGHV ISHVVNELHV PLLSFAATDP TLSASEYPYF LRSTISDYFE MHAVASIIDY YQWKEVTAIF VDDDYGRGGV SVLGDALGAK RARISHKAAI
201: PPNSDTDLIN DVLFRANMME SRVFVVHVNP DAGMRIFALA NKLQMMGAGY VWIVTDWLAA VLDSSGAGDL KDMSYIQGLI VLRQHTPDSD AKKKFIAKWN
301: NAANNRSIAS GLNSYGFYAY DSVWVVARAI NEYLNSGQQI TFSADPRLHK SNRSTLRLSN LKIFDGGDQL LQQLLLTNMT GLTGLVQFNA DRNLVRPAYD
401: ILNIGGTGSR LIGYWSNYSG LSVAAPEILY RKPPNTSTSA QQLHSVVWPG DTTTKPRGWV FPNNGQPLRV GVPNKPSFRE LVSVGKGPDN VTGYSVDIFN
501: AAIKLLPYPV PCQFITIGDG SKNPNYDDII SRIATNALDA AVGDFAIVRN RTKIAEFTQP YIEAGLVIVA PVRKANSNAW AFFKPFTLEM WCVTGTLFIF
601: VGVVVWILEH RTNEEFRGSP RRQVLTIFWF SFSTMFFAHR QNTVSALGRF VLIIWLFVVL IINSSYTASL TSILTVQQLA TGITGLDNLV ASALPIGYPA
701: GKFVRNYLID ELNIPESRLV PLSTVEEYAN ALNRGPKDGG VAAVVDEMPC VEIFLSTHCN FRIVGQEFTK EGWGFAFQRD SPLAADLSTA ILQLSETGQL
801: QRIHDEWLTD PTCGDDDSGL GAVRLGLGSF WGLFLLCALI CVFALTVYFA RVCWQYSRYS SSEPPGEPSD SAAAVTAATI AQIRPEKPKP TRLGSFKELI
901: QFADTKEEEI KKVMKRRLSE KDTRGTGSAH SVSSA

Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)

001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT

Arabidopsis Description

GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.