Factsheet for HORVU1Hr1G086120.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G086120.3
HORVU2Hr1G045730.6
HORVU7Hr1G104490.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05200.1	HORVU1Hr1G086120.3	AT1G05200.1	23590882
AT1G05200.1	HORVU2Hr1G045730.6	AT1G05200.1	23590882
AT1G05200.1	HORVU7Hr1G104490.2	AT1G05200.1	23590882

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G390300.2	Wheat	plasma membrane	93.78	93.28
TraesCS1B01G418500.1	Wheat	plasma membrane	93.03	92.64
TraesCS1D01G398500.1	Wheat	plasma membrane	92.93	92.63
Zm00001d014451_P001	Maize	plasma membrane	86.6	85.32
KXG20638	Sorghum	plasma membrane	86.92	84.48
HORVU7Hr1G104490.2	Barley	golgi, plasma membrane	78.24	78.07
GSMUA_Achr9P30180_001	Banana	mitochondrion, plasma membrane	61.95	64.29
Solyc05g045650.2.1	Tomato	plasma membrane	56.48	60.09
Solyc07g052400.2.1	Tomato	cytosol	51.34	59.06
VIT_12s0059g02270.t01	Wine grape	plasma membrane	58.09	58.66
PGSC0003DMT400065539	Potato	plasma membrane	57.98	57.49
HORVU2Hr1G045730.6	Barley	plasma membrane	56.7	57.13
PGSC0003DMT400013497	Potato	plasma membrane	57.88	56.9
KRH25388	Soybean	plasma membrane	56.06	56.6
KRH26793	Soybean	plasma membrane	57.45	56.6
KRH56121	Soybean	plasma membrane	56.16	56.4
CDY06165	Canola	plasma membrane	52.41	56.14
KRH22559	Soybean	plasma membrane	56.91	56.07
CDY46839	Canola	plasma membrane	56.16	55.1
CDY49512	Canola	plasma membrane	56.16	54.98
Bra015398.1-P	Field mustard	plasma membrane	55.95	54.89
AT2G32390.5	Thale cress	plasma membrane	55.52	54.35
CDY10044	Canola	plasma membrane	54.34	53.99
AT1G05200.1	Thale cress	plasma membrane	55.41	53.91
Bra005589.1-P	Field mustard	plasma membrane	54.13	53.44
Bra032480.1-P	Field mustard	plasma membrane	54.45	52.86
HORVU0Hr1G018770.1	Barley	plasma membrane	42.87	49.81
HORVU6Hr1G009520.1	Barley	plasma membrane	49.2	49.57
HORVU2Hr1G104920.3	Barley	plasma membrane	50.16	49.26
HORVU0Hr1G036590.3	Barley	plasma membrane	49.2	49.2
HORVU2Hr1G049510.4	Barley	plasma membrane	49.2	49.2
CDY48271	Canola	plastid	38.16	48.17
CDY66698	Canola	plasma membrane	45.34	47.58
CDX84735	Canola	plasma membrane	44.91	47.18
CDY12211	Canola	plasma membrane	43.52	45.67
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	19.51	33.77
HORVU7Hr1G031400.1	Barley	plasma membrane	24.97	32.09
HORVU7Hr1G081410.3	Barley	plasma membrane	19.61	31.99
GSMUA_Achr5P00750_001	Banana	mitochondrion	63.24	31.52
HORVU5Hr1G063500.1	Barley	plasma membrane	31.19	31.32
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	16.29	30.4
HORVU5Hr1G063540.6	Barley	plasma membrane	29.58	30.26
HORVU5Hr1G063490.1	Barley	golgi, vacuole	13.72	30.12
HORVU5Hr1G010420.17	Barley	plasma membrane	28.83	29.89
HORVU5Hr1G072170.1	Barley	plasma membrane	25.51	29.82
HORVU6Hr1G083680.5	Barley	plasma membrane	32.37	29.81
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	30.98	29.58
HORVU6Hr1G083570.16	Barley	plasma membrane	32.05	29.37
HORVU5Hr1G063530.5	Barley	plasma membrane	28.83	29.33
HORVU5Hr1G063440.1	Barley	plasma membrane	30.76	29.23
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	29.58	27.19
HORVU5Hr1G063430.8	Barley	plasma membrane	26.9	26.73

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0035235	GO:GO:0038023	EnsemblPlantsGene:HORVU1Hr1G086120	EnsemblPlants:HORVU1Hr1G086120.3	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
UniProt:M0Y5Z0	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176
PANTHER:PTHR43891	PANTHER:PTHR43891:SF17	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850
SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI00029518C1	SEG:seg	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:M0Y5Z0]

Coordinates

chrchr1H:-:536888444..536893406

Molecular Weight (calculated)

102195.0 Da

IEP (calculated)

5.690

GRAVY (calculated)

0.060

Length

933 amino acids

Sequence
(BLAST)

001: MGALQLMPLL LALLAAAARA VTAAGAGPRP SEVAVGALFT YDSVIGRAAR LAIELAVDDV NADRTVLAGT RLSLIAQDTN CSGFVGTIEA LELMEKNVVA
101: VIGPQSSGIG HVISHVVNEL HVPLLSFAAT DPTLSASEYP YFIRTTINDL FQMNAVASIV DYYQWKEVTA IFVDDDYGRG GVSALGDALA AKRAKISHKA
201: AIPPNSNTEV INDVLFRANM MESRVMVVHA NPDTGMRIFS VANKLQMMAN GYVWIVTDWL AAVLDSSASG DLKDMSHIQG LIVLRQHTPE SDAKDKFITK
301: WNNAARSRGI TSGLNSYGFY AYDSVWAVAR GIDKFLDNGQ QVNFSTDPKL HSSNDSTLQL STLKVFDGGE QMLQQLLLTN FTGLTGPVRF NSDRNLVRPA
401: YDILNVGGSG SRLIGYWSNY SDLSVAAPET LYQKPPNASS VAQRLYNVVW PGDSTTTPKG WVFPNNGQPL RVGVPIKASF KELVAGDRGS DHVTGYCVDI
501: FNAAIKLLPY PVPCQFITIG DGRKNPNYDD IISMVADNSL DAAVGDFAIV RNRTKMAEFT QPYIESGLVI VAPVQRAASS AWAFLKPFTL EMWCVTGALF
601: IFVGIVVWIL EHRTNEEFRG SPRRQIITII WFSFSTMFFS HRQNTGSALG RFVLIIWLFV VLIINSSYTA SLTSILTVQQ LSTGITGIDN LISSGLPIGY
701: QAGKFTKNYL VEELSIPESR LVALNTIKEY ADALTRGSED GGVAAIVDEM PYVEIFLSYH CDFRIVGREF TKEGWGFAFQ RDSPLAADLS TAILQLSESG
801: QLQRIHDEWF TRPSCSSDDS EVAATSLGLR SFWGLFLVCA LICLLALVVF FIRVCWQYSH YSSSEAAAEP SAADVAATTD AVERQRRPSR LGSFRELIEF
901: VDKKEAEVRR TMKRRPSEKD KQPAESSDAQ PVA

Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)

001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT

Arabidopsis Description

GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.