Factsheet for HORVU2Hr1G045730.6

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G086120.3
HORVU2Hr1G045730.6
HORVU7Hr1G104490.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05200.1	HORVU1Hr1G086120.3	AT1G05200.1	23590882
AT1G05200.1	HORVU2Hr1G045730.6	AT1G05200.1	23590882
AT1G05200.1	HORVU7Hr1G104490.2	AT1G05200.1	23590882

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G246200.1	Wheat	plasma membrane	93.2	96.32
TraesCS2D01G226400.1	Wheat	plasma membrane	96.22	96.22
TraesCS2A01G220700.1	Wheat	plasma membrane	94.71	94.5
EER97313	Sorghum	plasma membrane	80.67	80.84
Zm00001d006508_P003	Maize	plasma membrane	80.24	80.5
GSMUA_Achr9P11690_001	Banana	plasma membrane	63.39	65.73
GSMUA_Achr9P02750_001	Banana	plasma membrane	63.61	64.23
GSMUA_Achr6P00460_001	Banana	plasma membrane	62.09	62.16
Solyc05g045650.2.1	Tomato	plasma membrane	55.83	58.95
VIT_12s0059g02270.t01	Wine grape	plasma membrane	57.99	58.12
HORVU1Hr1G086120.3	Barley	plasma membrane	57.13	56.7
HORVU7Hr1G104490.2	Barley	golgi, plasma membrane	57.13	56.58
PGSC0003DMT400013497	Potato	plasma membrane	57.67	56.27
Solyc07g052400.2.1	Tomato	cytosol	49.24	56.23
KRH26793	Soybean	plasma membrane	57.45	56.18
KRH22559	Soybean	plasma membrane	57.24	55.97
PGSC0003DMT400065539	Potato	plasma membrane	56.7	55.79
CDY06165	Canola	plasma membrane	52.27	55.57
KRH25388	Soybean	plasma membrane	55.08	55.19
KRH56121	Soybean	plasma membrane	54.97	54.79
CDY10044	Canola	plasma membrane	54.54	53.78
Bra015398.1-P	Field mustard	plasma membrane	53.67	52.26
CDY49512	Canola	plasma membrane	53.78	52.26
AT1G05200.1	Thale cress	plasma membrane	54.0	52.14
CDY46839	Canola	plasma membrane	53.35	51.95
Bra032480.1-P	Field mustard	plasma membrane	53.89	51.93
AT2G32390.5	Thale cress	plasma membrane	53.35	51.84
HORVU0Hr1G018770.1	Barley	plasma membrane	43.74	50.44
HORVU0Hr1G036590.3	Barley	plasma membrane	50.43	50.05
HORVU2Hr1G049510.4	Barley	plasma membrane	50.43	50.05
Bra005589.1-P	Field mustard	plasma membrane	51.08	50.05
HORVU2Hr1G104920.3	Barley	plasma membrane	50.97	49.68
HORVU6Hr1G009520.1	Barley	plasma membrane	48.92	48.92
CDY48271	Canola	plastid	36.72	46.01
CDY66698	Canola	plasma membrane	44.17	46.01
CDX84735	Canola	plasma membrane	43.52	45.38
CDY12211	Canola	plasma membrane	40.39	42.07
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	21.17	36.36
HORVU7Hr1G081410.3	Barley	plasma membrane	21.06	34.09
HORVU5Hr1G063490.1	Barley	golgi, vacuole	15.01	32.71
HORVU7Hr1G031400.1	Barley	plasma membrane	25.49	32.51
HORVU5Hr1G063500.1	Barley	plasma membrane	32.51	32.4
HORVU5Hr1G072170.1	Barley	plasma membrane	27.86	32.33
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	17.28	32.0
HORVU5Hr1G063530.5	Barley	plasma membrane	31.32	31.62
HORVU5Hr1G063540.6	Barley	plasma membrane	30.99	31.47
HORVU5Hr1G010420.17	Barley	plasma membrane	29.81	30.67
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	32.07	30.4
HORVU5Hr1G063440.1	Barley	plasma membrane	31.97	30.14
HORVU5Hr1G063430.8	Barley	plasma membrane	30.02	29.61
HORVU6Hr1G083680.5	Barley	plasma membrane	31.97	29.22
HORVU6Hr1G083570.16	Barley	plasma membrane	31.64	28.78
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	31.53	28.77

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0035235	GO:GO:0038023	EnsemblPlantsGene:HORVU2Hr1G045730	EnsemblPlants:HORVU2Hr1G045730.6	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
UniProt:M0X6U2	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176
PANTHER:PTHR43891	PANTHER:PTHR43891:SF12	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850
SignalP:SignalP-TM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI0002967289	SEG:seg	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:M0X6U2]

Coordinates

chrchr2H:-:240518507..240523760

Molecular Weight (calculated)

100791.0 Da

IEP (calculated)

6.248

GRAVY (calculated)

0.139

Length

926 amino acids

Sequence
(BLAST)

001: MGSAHLAALL LCVCIIAGGA IAGRQNDTNG VSRPAEVRIG ALFTFGSVIG RAVMPAIVLA VADVNADPTL LPGTKLSLLM QDTNCSGFVG TIEALQLLAK
101: DVIAVLGPQS SAIAHIISHA VNKLQVPLIS FAASDPTLSS LEYPYFVRAT QSDYYQMSAV ASIISQYQWR EVIAIYVDDD YGRGGITALG DALAKKMSKI
201: AYKAKLPPGA GRSAIQDILM QVNEMESRVY VVHVNPDSGM TVFSAAKSLG MMSSGYVWIA TDWLSAVIDS SGHVASDVTE NTQGVITLRQ HVPDSGIQQS
301: LLPKLNNLTR KGNRSSFSSY TAHAYDSVWL VAHAVEQFLS AGNAVSFSAN QNLQAIKGSG LQLDSLRILN NGDKLLEKVL QANFTGVSGQ VQFTLDRNLI
401: HPAYDILNIG GTGFRTIGYW SNISGLSIAA PENLHSVQLN STTNDIQLHD VIWPGQTAEK PRGWVFPYHG KLLRIGVPLR TSYNEFVMQD DGPDGVKGFS
501: VDVFKSAISL LPYPVGCSFV LFGDGLKNPS YSDLVQKVSE NYFDAAIGDI SIVTNRTRLV DFTQPYTESG LIIVAPAKET ESNAWAFLKP FTFQMWCVLG
601: LLFLFVGTVV WILEHRTNTE FRGTPRQQIM TVCWFSFSTM FFAHRENTSS ALGRFVLLVW LFVVLIINSS YTASLTSLLT VQELTSGVKG LDSLISSSSA
701: IGYQVGSFAR NYLVEELNIA DSRLVPLNSP SDYARALELG SGNGGVAAII DELPYVEIFL SKYCKFKTVG QVFTKSGWGF AFPRDSPLAD DLSTAILTLS
801: ENGDLQRIHD EWLSGMKGCE SDDSGMNSNS LSLASFWGLF VVCGLACALA LLIFFWRILF QYSKYNNQVE LEPTIVNRTA RLTSIKSLIS FVDKREEEVK
901: NALKKKPNGS QQARIGSTEE PSTLPL

Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)

001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT

Arabidopsis Description

GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.