Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G390300.2
TraesCS1B01G418500.1
TraesCS1D01G398500.1
TraesCS2A01G220700.1
TraesCS2A01G257200.1
TraesCS2B01G246200.1
TraesCS2B01G285400.1
TraesCS2D01G226400.1
TraesCS2D01G265700.1
TraesCS7A01G455200.1
TraesCS7B01G355500.1
TraesCS7D01G444100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 TraesCS1A01G390300.2 AT1G05200.1 23590882
AT1G05200.1 TraesCS1B01G418500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS1D01G398500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G220700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2A01G257200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G246200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2B01G285400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G226400.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS2D01G265700.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7A01G455200.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7B01G355500.1 AT1G05200.1 23590882
AT1G05200.1 TraesCS7D01G444100.2 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G246200.1 Wheat plasma membrane 94.92 98.1
HORVU2Hr1G045730.6 Barley plasma membrane 96.22 96.22
TraesCS2A01G220700.1 Wheat plasma membrane 95.03 94.83
EER97313 Sorghum plasma membrane 80.67 80.84
Zm00001d006508_P003 Maize plasma membrane 79.81 80.06
GSMUA_Achr9P11690_001 Banana plasma membrane 63.39 65.73
GSMUA_Achr9P02750_001 Banana plasma membrane 64.15 64.78
GSMUA_Achr6P00460_001 Banana plasma membrane 62.2 62.27
TraesCS2D01G265700.1 Wheat plasma membrane 58.75 58.75
Solyc05g045650.2.1 Tomato plasma membrane 55.51 58.61
VIT_12s0059g02270.t01 Wine grape plasma membrane 57.99 58.12
TraesCS1D01G398500.1 Wheat plasma membrane 57.24 56.62
KRH26793 Soybean plasma membrane 57.24 55.97
KRH22559 Soybean plasma membrane 57.13 55.86
CDY06165 Canola plasma membrane 52.48 55.8
Solyc07g052400.2.1 Tomato cytosol 48.7 55.61
PGSC0003DMT400013497 Potato plasma membrane 56.91 55.53
KRH25388 Soybean plasma membrane 55.18 55.3
TraesCS7D01G444100.2 Wheat plasma membrane 57.67 55.28
PGSC0003DMT400065539 Potato plasma membrane 56.16 55.26
KRH56121 Soybean plasma membrane 55.4 55.22
CDY10044 Canola plasma membrane 54.97 54.21
Bra015398.1-P Field mustard plasma membrane 54.32 52.89
CDY49512 Canola plasma membrane 54.43 52.89
CDY46839 Canola plasma membrane 54.0 52.58
Bra032480.1-P Field mustard plasma membrane 54.54 52.55
AT1G05200.1 Thale cress plasma membrane 54.32 52.45
AT2G32390.5 Thale cress plasma membrane 53.13 51.63
TraesCS2D01G455600.2 Wheat plasma membrane 50.97 51.36
Bra005589.1-P Field mustard plasma membrane 51.3 50.26
CDY66698 Canola plasma membrane 44.6 46.46
CDY48271 Canola plastid 36.61 45.87
CDX84735 Canola plasma membrane 43.95 45.83
CDY12211 Canola plasma membrane 40.06 41.73
TraesCS5D01G228000.1 Wheat plasma membrane 29.27 34.22
TraesCS2D01G025600.1 Wheat plasma membrane 23.76 33.74
TraesCS5D01G225900.1 Wheat golgi 30.56 32.68
TraesCS5D01G226500.2 Wheat cytosol 30.89 32.65
TraesCS5D01G227800.1 Wheat plasma membrane 32.18 32.25
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 22.03 32.13
TraesCS5D01G226300.1 Wheat plasma membrane 32.61 31.43
TraesCS5D01G226700.3 Wheat plasma membrane 30.56 30.86
TraesCS5D01G226600.1 Wheat plasma membrane 30.89 30.79
TraesCS5D01G266800.1 Wheat plasma membrane 29.59 30.65
TraesCS5D01G226400.1 Wheat plasma membrane 30.99 30.24
TraesCS5D01G051300.1 Wheat golgi 29.27 30.14
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 31.75 29.94
TraesCS5D01G226000.1 Wheat plasma membrane 30.13 29.9
TraesCS5D01G226800.1 Wheat plasma membrane 30.67 29.83
TraesCS6D01G330900.1 Wheat plasma membrane 32.18 29.56
TraesCS2D01G462300.1 Wheat plasma membrane 30.99 29.47
TraesCS6D01G330500.1 Wheat plasma membrane 31.32 28.52
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300InterPro:ANF_lig-bd_rcptGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF12InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixEnsemblPlantsGene:TraesCS2D01G226400EnsemblPlants:TraesCS2D01G226400.1TIGR:cd06366TIGR:cd13686
SEG:seg:::::
Description
No Description!
Coordinates
chr2D:-:194731469..194735444
Molecular Weight (calculated)
100722.0 Da
IEP (calculated)
6.104
GRAVY (calculated)
0.136
Length
926 amino acids
Sequence
(BLAST)
001: MGSAHFAAIL LCVCIIAGGA IADSQNGTNG VSRPAEVRIG ALFTFDSVIG RAAKPAIELA VADVNADPTV LPGTKLSLLM QDTNCSGFVG TIEALQLLAK
101: DVIAVLGPQS SAIAHIISHA ANKLQVPLIS FAASDPTLSS LEYPYFVRAT QSDYYQMSAV ASIISQYQWR EVIAIYVDDD YGRGGITALG DALAKKMSKI
201: AYKAKLPPGA GRTAIQDMLM QVNEMESRVY VVHVNPDSGM TVFSAAKSLG MMSSGYVWIA TDWLSAVIDS SGHVASDATE NTQGVIMLHQ HVADSGIQQS
301: LLPKLNSLTR KGNRSSFSSY TAHAYDSVWL VAHAVEQFLS AGNAVSFSAN QNLQAIKGSS LQLDSLRVLN NGDKLLEKVL QANFTGVSGQ VQFTLDRNLI
401: HPAYDILNIG GTGFRTIGYW SNFSGLSVAA PENLHSVPLN STTNDIQLHS VIWPGQTAEK PRGWVFPYHG KLLRIGVPLR TSYNEFVMQD DGPDGVKGFS
501: VDVFKSAISL LPYPVGCTFV LFGDGLKNPS YSDLVQKVSE NYFDAAIGDI SIVTNRTRLV DFTQPYTESG LIIVAPARET ESNAWAFLKP FTFQMWCVLG
601: LLFLFVGTVV WILEHRTNTE FRGTPRQQIM TVCWFSFSTM FFAHRENTSS ALGRFVLLVW LFVVLIINSS YTASLTSLLT VQELTTGVKG LDSLISSSSA
701: IGYQVGSFAR NYLVEELNIA DSRLVPLNSP SDYARALELG SGNGGVAAII DELPYVEIFL SKYCKFKTVG QVFTKSGWGF AFPRDSPLAD DLSTAILTLS
801: ENGDLQRIHD EWLSGMKGCE SDDSGMSSNS LSLSSFWGLF VVCGLACVVA LLIFFWRILF QYSKYNNQVE LEAAIVNRPA RLTSIKSLIS FVDKREEEVK
901: NALKKKPNGS QQARIGTTEE PSTLPL
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.