Factsheet for TraesCS5D01G051300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G046400.1	Wheat	plasma membrane	95.66	95.77
TraesCS5A01G042800.1	Wheat	plasma membrane	93.66	93.76
HORVU5Hr1G010420.17	Barley	plasma membrane	88.1	88.0
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	55.06	77.95
TraesCS5D01G266800.1	Wheat	plasma membrane	77.31	77.74
TraesCS5D01G226600.1	Wheat	plasma membrane	72.64	70.29
EER98936	Sorghum	plasma membrane	66.41	63.11
OQU89534	Sorghum	plasma membrane	63.07	62.24
TraesCS5D01G228000.1	Wheat	plasma membrane	48.28	54.8
TraesCS5D01G227800.1	Wheat	plasma membrane	55.06	53.57
TraesCS5D01G226500.2	Wheat	cytosol	49.72	51.03
TraesCS5D01G226700.3	Wheat	plasma membrane	51.84	50.82
TraesCS5D01G226800.1	Wheat	plasma membrane	51.39	48.53
VIT_04s0069g00200.t01	Wine grape	cytosol	22.58	46.03
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	27.59	44.68
GSMUA_Achr3P04970_001	Banana	plasma membrane	47.16	44.31
VIT_04s0069g00380.t01	Wine grape	cytosol	19.91	43.66
GSMUA_Achr9P13570_001	Banana	plasma membrane	42.49	41.89
VIT_04s0069g00560.t01	Wine grape	plasma membrane	40.71	40.85
VIT_04s0069g00720.t01	Wine grape	cytosol	27.03	40.7
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	36.82	39.98
VIT_04s0069g00170.t01	Wine grape	plasma membrane	40.71	39.52
VIT_04s0069g00670.t01	Wine grape	plasma membrane	40.27	39.39
VIT_04s0069g00540.t01	Wine grape	plasma membrane	30.59	38.9
VIT_04s0069g00620.t01	Wine grape	plasma membrane	42.38	38.48
KRH50533	Soybean	plasma membrane	34.04	38.15
AT2G29110.2	Thale cress	plasma membrane	39.38	37.34
Bra032072.1-P	Field mustard	plasma membrane	37.15	37.28
VIT_04s0069g00060.t01	Wine grape	plasma membrane	40.38	37.08
AT2G29100.2	Thale cress	plasma membrane	38.71	36.94
KRH50532	Soybean	plasma membrane	33.15	36.88
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	35.48	36.84
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.93	36.51
Solyc08g006500.2.1	Tomato	extracellular	39.27	36.35
Bra023313.1-P	Field mustard	plasma membrane	34.59	36.2
Bra040760.1-P	Field mustard	cytosol	33.82	36.1
CDY51113	Canola	plasma membrane	34.26	35.86
TraesCS5D01G225900.1	Wheat	golgi	34.48	35.8
CDY54213	Canola	plasma membrane	35.15	35.55
CDX85724	Canola	plasma membrane	33.93	35.51
AT5G27100.1	Thale cress	plasma membrane	35.37	35.29
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.25	35.24
AT2G24720.1	Thale cress	plasma membrane	36.04	35.22
AT2G29120.1	Thale cress	plasma membrane	37.26	35.19
CDY31756	Canola	cytosol, peroxisome, plastid	33.93	35.14
VIT_04s0069g00230.t01	Wine grape	plasma membrane	39.93	35.09
CDY31755	Canola	cytosol	35.93	34.99
AT2G24710.3	Thale cress	plasma membrane	35.71	34.93
Bra040761.1-P	Field mustard	cytosol	35.93	34.69
CDY70035	Canola	cytosol, plasma membrane	31.15	34.61
CDY38574	Canola	plasma membrane	37.15	34.54
Bra032063.1-P	Field mustard	plasma membrane	35.37	34.45
AT5G11210.5	Thale cress	plasma membrane	35.04	34.31
CDY00544	Canola	plasma membrane	29.7	34.27
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	37.37	34.22
PGSC0003DMT400023744	Potato	cytosol	33.15	34.1
CDX73196	Canola	cytosol, peroxisome, plasma membrane	34.48	33.95
CDX72325	Canola	plasma membrane	25.36	33.83
CDY39533	Canola	plasma membrane	36.48	33.78
TraesCS5D01G226300.1	Wheat	plasma membrane	36.04	33.71
CDY36173	Canola	plasma membrane	30.14	33.62
CDY45595	Canola	plasma membrane	32.04	33.49
TraesCS2D01G025600.1	Wheat	plasma membrane	24.03	33.13
CDY58212	Canola	cytosol, plasma membrane	30.7	33.09
TraesCS6D01G330900.1	Wheat	plasma membrane	36.93	32.94
AT5G11180.2	Thale cress	plasma membrane	35.37	32.89
TraesCS5D01G226400.1	Wheat	plasma membrane	34.48	32.67
AT4G31710.2	Thale cress	plasma membrane	32.93	32.46
CDY56837	Canola	plasma membrane	33.04	32.35
TraesCS6D01G330500.1	Wheat	plasma membrane	36.6	32.35
TraesCS2D01G462300.1	Wheat	plasma membrane	34.82	32.14
CDY68132	Canola	plasma membrane	35.93	32.01
Bra015817.1-P	Field mustard	plasma membrane	35.93	32.01
CDY63640	Canola	cytosol	19.24	31.86
TraesCS5D01G226000.1	Wheat	plasma membrane	33.04	31.83
CDY31759	Canola	cytosol, peroxisome, plasma membrane	16.57	31.63
CDY50141	Canola	plasma membrane	17.46	29.62
CDY13449	Canola	cytosol	31.59	29.61
Bra023989.1-P	Field mustard	cytosol	32.15	29.34
TraesCS2D01G226400.1	Wheat	plasma membrane	30.14	29.27
TraesCS1D01G398500.1	Wheat	plasma membrane	29.48	28.31
TraesCS2D01G265700.1	Wheat	plasma membrane	29.14	28.29
TraesCS2D01G455600.2	Wheat	plasma membrane	28.92	28.29
TraesCS7D01G444100.2	Wheat	plasma membrane	29.25	27.23
VIT_04s0069g00330.t01	Wine grape	plastid	40.04	20.45

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	ncoils:Coil
GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891
PANTHER:PTHR43891:SF19	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5D01G051300	EnsemblPlants:TraesCS5D01G051300.1	TIGR:cd06366	TIGR:cd13686
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:49147143..49155003

Molecular Weight (calculated)

100637.0 Da

IEP (calculated)

8.648

GRAVY (calculated)

-0.046

Length

899 amino acids

Sequence
(BLAST)

001: MKRARGGAIV LFLLLAVDFG IAQNTIGKAD GFHVGVILDL GSPVGKVART SVLLAVQDFY AAHRNYSTKL VLHVRDSMGS DIKAASAAIE LLENYKVQAI
101: IGPQKSSEVV FISKLGNITQ VPIVSFTATS PSLTCDSMPY FVQATPDDSA QVNSIASLVQ AYGWREVVAV YDDTDYGRGI VPYLTDALQK IDVRVPYRSV
201: IPSSATSETI IKKLIELMAM QTRVFIVHMS STMTSLLFMK AKELGMMNQG FAWITTSGVA NIMDTLNPRV IKAMNGVLGV RYHVSRSQEL DNLSKRWNKM
301: YLQDNPDESP SNKLSIVGLW GYDTIWALAR AAEKVGVSNT TNKPLLSIKN STCLESMTIS TKGHELLKTI VQNKFKGFSG EFDLTYRQQH KAYVFQIINV
401: VGRGWREIGF WTMKSGLSRQ LKQDGFKKTG QQSMHDLNPV IWPGESTKIP MGWEIPAVGK KLRVGVRSSK IPEFIKTYKD PVKNATTVSG LTVDIFEEAV
501: KRLPFPLSYE YLEFDTTDTR SYNDFVYHVY LQEYDIAVAD ITIRYNRSLY VDFTVPYTES GVGMIVPVKE NVMKDVWLFL KPLSTEMWIG SIILFMYTGV
601: VVWLLEYLNG SEHVHGPFSL KQLATTIFSI LEEKEKLECF LPRIVLRVWM VVLLVLAASY TASFASMLTV HKLSPTVNDV QELQKNGEYV GFHQGSYIEG
701: LLVEIGFDTS KLKSYATLED FYSALSNGSI VAVVLDIPYI KLFLAKYNKG YAMVGPIYKS AGFAFALPKN SPLCVEMSRA ILNITGGDII IHFEKKWIDQ
801: NSHENDGTLD GSGAITFESF GGLFLLTGVV TTCSPFVAML MNRYKEDQQD PGNKGDDQNE FGHKQVKKRR HVKNKEMKTE NELREINNTV SASQFEQKW

Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)

001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.