Factsheet for TraesCS5B01G046400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G051300.1	Wheat	golgi	95.77	95.66
TraesCS5A01G042800.1	Wheat	plasma membrane	93.88	93.88
HORVU5Hr1G010420.17	Barley	plasma membrane	88.53	88.33
TraesCS5B01G257800.1	Wheat	plasma membrane	76.73	76.3
TraesCS5B01G217700.1	Wheat	plasma membrane	72.61	71.41
EER98936	Sorghum	plasma membrane	66.7	63.32
OQU89534	Sorghum	plasma membrane	64.03	63.12
TraesCS5B01G218700.1	Wheat	plasma membrane	54.79	52.73
TraesCS7B01G242400.1	Wheat	plasma membrane	52.78	52.38
TraesCS5B01G218900.1	Wheat	plasma membrane	55.12	52.33
TraesCS5B01G217800.1	Wheat	plasma membrane	48.89	51.53
VIT_04s0069g00200.t01	Wine grape	cytosol	22.83	46.49
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	28.06	45.41
GSMUA_Achr3P04970_001	Banana	plasma membrane	47.88	44.93
VIT_04s0069g00380.t01	Wine grape	cytosol	20.27	44.39
GSMUA_Achr9P13570_001	Banana	plasma membrane	43.1	42.43
VIT_04s0069g00560.t01	Wine grape	plasma membrane	41.65	41.74
VIT_04s0069g00720.t01	Wine grape	cytosol	27.28	41.04
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	37.31	40.46
VIT_04s0069g00170.t01	Wine grape	plasma membrane	41.43	40.17
VIT_04s0069g00670.t01	Wine grape	plasma membrane	41.09	40.15
VIT_04s0069g00540.t01	Wine grape	plasma membrane	30.73	39.04
VIT_04s0069g00620.t01	Wine grape	plasma membrane	42.98	38.99
KRH50533	Soybean	plasma membrane	34.3	38.4
Bra032072.1-P	Field mustard	plasma membrane	38.2	38.28
VIT_04s0069g00060.t01	Wine grape	plasma membrane	41.31	37.9
AT2G29100.2	Thale cress	plasma membrane	38.98	37.16
AT2G29110.2	Thale cress	plasma membrane	39.2	37.13
Solyc08g006500.2.1	Tomato	extracellular	40.09	37.08
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	35.75	37.07
KRH50532	Soybean	plasma membrane	33.07	36.76
Bra023313.1-P	Field mustard	plasma membrane	35.08	36.67
CDY54213	Canola	plasma membrane	36.19	36.56
CDY51113	Canola	plasma membrane	34.97	36.55
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.86	36.4
Bra040760.1-P	Field mustard	cytosol	33.96	36.22
CDX85724	Canola	plasma membrane	34.63	36.2
AT5G27100.1	Thale cress	plasma membrane	36.3	36.18
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	35.86	36.02
AT2G24720.1	Thale cress	plasma membrane	36.86	35.98
VIT_04s0069g00230.t01	Wine grape	plasma membrane	40.87	35.87
Bra032063.1-P	Field mustard	plasma membrane	36.64	35.64
AT2G29120.1	Thale cress	plasma membrane	37.75	35.61
AT2G24710.3	Thale cress	plasma membrane	36.41	35.58
CDY31756	Canola	cytosol, peroxisome, plastid	34.19	35.37
CDY00544	Canola	plasma membrane	30.62	35.3
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.27	35.24
CDY31755	Canola	cytosol	36.08	35.1
CDX72325	Canola	plasma membrane	26.28	35.01
Bra040761.1-P	Field mustard	cytosol	36.08	34.8
CDY45595	Canola	plasma membrane	33.3	34.77
AT5G11210.5	Thale cress	plasma membrane	35.52	34.75
CDY36173	Canola	plasma membrane	31.18	34.74
CDY70035	Canola	cytosol, plasma membrane	31.29	34.73
CDX73196	Canola	cytosol, peroxisome, plasma membrane	35.08	34.5
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	37.53	34.46
CDY38574	Canola	plasma membrane	37.08	34.44
PGSC0003DMT400023744	Potato	cytosol	33.41	34.32
CDY39533	Canola	plasma membrane	36.53	33.78
AT4G31710.2	Thale cress	plasma membrane	34.08	33.55
CDY56837	Canola	plasma membrane	34.19	33.44
TraesCS5B01G217500.1	Wheat	plasma membrane	35.3	33.3
CDY58212	Canola	cytosol, plasma membrane	30.85	33.21
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	36.64	33.2
AT5G11180.2	Thale cress	plasma membrane	35.75	33.2
Bra015817.1-P	Field mustard	plasma membrane	36.86	32.8
CDY68132	Canola	plasma membrane	36.86	32.8
TraesCS6B01G381400.1	Wheat	plasma membrane	36.86	32.64
TraesCS6B01G380800.1	Wheat	plasma membrane	37.08	32.58
CDY63640	Canola	cytosol	19.49	32.23
TraesCS5B01G217100.1	Wheat	plasma membrane	33.52	32.16
TraesCS7B01G057800.1	Wheat	plasma membrane	31.4	32.05
CDY31759	Canola	cytosol, peroxisome, plasma membrane	16.7	31.85
TraesCS6B01G438400.1	Wheat	plasma membrane	30.51	30.41
CDY13449	Canola	cytosol	32.29	30.24
Bra023989.1-P	Field mustard	cytosol	32.85	29.95
CDY50141	Canola	plasma membrane	17.59	29.81
TraesCS2B01G246200.1	Wheat	plasma membrane	29.62	29.69
TraesCS6B01G065400.1	Wheat	plasma membrane	29.96	29.05
TraesCS1B01G418500.1	Wheat	plasma membrane	30.29	29.03
TraesCS6B01G066200.1	Wheat	plasma membrane	29.4	28.66
TraesCS6B01G065700.1	Wheat	plasma membrane	29.4	28.6
TraesCS6B01G380900.1	Wheat	plasma membrane	30.62	28.56
TraesCS2B01G477300.4	Wheat	plasma membrane	29.06	28.4
TraesCS2B01G285400.1	Wheat	plasma membrane	29.29	28.34
TraesCS6B01G065500.1	Wheat	plasma membrane	29.06	28.19
TraesCS7B01G355500.1	Wheat	plasma membrane	29.18	28.02
VIT_04s0069g00330.t01	Wine grape	plastid	40.87	20.85

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0038023	InterPro:GPCR_3	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PANTHER:PTHR43891	PANTHER:PTHR43891:SF19	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5B01G046400	EnsemblPlants:TraesCS5B01G046400.1	TIGR:cd06366	TIGR:cd13686	SEG:seg	:

Description

No Description!

Coordinates

chr5B:-:51856770..51865748

Molecular Weight (calculated)

100328.0 Da

IEP (calculated)

7.870

GRAVY (calculated)

-0.038

Length

898 amino acids

Sequence
(BLAST)

001: MERASGAIVL FLLLAVDFGI AQNTTGKADG FHVGVILDLG SPVGKVARAS VLLAVQDFYA AHRNYSTKLV LHIRDSMGSD IKAASAAIEL LENYKVQAII
101: GPQKSSEVVF ISKLGNITQV PIVSFTATSP SLTCDSMPYF VRATPDDSAQ VNSIASLIQA YGWREVVAVY DDTDYGRGIV PYLTDALQKI DVRVPYRSVI
201: PSLATSETII KKLNELMAMQ TRVFIVHMSS TMTSLLFMKA KELGMMNQGF AWITTSGVAN IMDTLNPRVI EAMSGVLGVR YHVSRSQELD NLSKRWNKMY
301: LQDNPDESPS NKLSIVGLWG YDAIWALARA AEKVGVSNTT NNPLLSIKNS TCLESMTIST KGRELLKTIV QNKFKGFSGE FDLTYKKQHK AYVFQIINVV
401: GRGWREIGFW TVKSGLSRQL KQDGFKKTGQ QPMHDLNPVI WPGESTKIPM GWEIPAVGKK LRVGVRSSKI PEFIKTYKDP VKNATIVSGL TIDIFEEAVK
501: RLPFPLSYEY LEFDTTDTGS YNDFVYHVYL QEYDIAVADI TIRYNRSLYV DFTVPYTESG VGMIVPVKEN VMKDVWLFLK PLSTEMWIGS IILFMYTGVV
601: VWLLEYLNGN EHVHGPFSLK QLATTIFTIF EEKEKLECFL PRIVLRVWMV VLLVLAASYT ASFASMLTVH KLSPTVNDVQ ELQKNGEYVG FHQGSYIEGL
701: LVEIGFDTSK LRAYATLEDF YSALSNGSIV AVVLDVPYIK LFLAKYNKGY TMVGPIYKSA GFAFALPKNS PLCAEMSRAI LNITGGDTII QFEKKWIDQN
801: SHENDGTLDG SGAITFESFG GLFLLTGVVT TCSPFVAMLM NCYKEYQQDP GNKGDDQNEL GHKQVKKRRN GKNKEMKTET ELREINNNVS ASQFEQKW

Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)

001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL

Arabidopsis Description

GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.