Factsheet for TraesCS5B01G257800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G266800.1	Wheat	plasma membrane	81.73	82.55
TraesCS5B01G046400.1	Wheat	plasma membrane	76.3	76.73
TraesCS5B01G217700.1	Wheat	plasma membrane	74.42	73.6
EER98936	Sorghum	plasma membrane	68.66	65.54
OQU89534	Sorghum	plasma membrane	65.45	64.87
TraesCS5B01G218700.1	Wheat	plasma membrane	56.7	54.88
TraesCS5B01G218900.1	Wheat	plasma membrane	57.36	54.76
TraesCS7B01G242400.1	Wheat	plasma membrane	53.71	53.59
TraesCS5B01G217800.1	Wheat	plasma membrane	50.17	53.17
VIT_04s0069g00200.t01	Wine grape	cytosol	23.37	47.85
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	28.57	46.49
GSMUA_Achr3P04970_001	Banana	plasma membrane	48.51	45.77
VIT_04s0069g00380.t01	Wine grape	cytosol	20.71	45.61
VIT_04s0069g00560.t01	Wine grape	plasma membrane	43.19	43.53
GSMUA_Achr9P13570_001	Banana	plasma membrane	43.52	43.09
VIT_04s0069g00170.t01	Wine grape	plasma membrane	43.08	42.01
VIT_04s0069g00670.t01	Wine grape	plasma membrane	42.52	41.78
VIT_04s0069g00720.t01	Wine grape	cytosol	27.35	41.37
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	37.87	41.3
VIT_04s0069g00540.t01	Wine grape	plasma membrane	31.67	40.45
VIT_04s0069g00620.t01	Wine grape	plasma membrane	43.74	39.9
VIT_04s0069g00060.t01	Wine grape	plasma membrane	42.08	38.82
KRH50533	Soybean	plasma membrane	34.0	38.28
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	39.31	38.01
Solyc08g006500.2.1	Tomato	extracellular	40.86	38.0
AT2G29100.2	Thale cress	plasma membrane	39.42	37.79
AT2G29110.2	Thale cress	plasma membrane	39.65	37.76
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	36.21	37.76
KRH50532	Soybean	plasma membrane	33.67	37.62
Bra032072.1-P	Field mustard	plasma membrane	37.32	37.61
VIT_04s0069g00230.t01	Wine grape	plasma membrane	42.3	37.34
AT5G27100.1	Thale cress	plasma membrane	37.1	37.18
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	36.54	36.91
Bra023313.1-P	Field mustard	plasma membrane	35.11	36.9
CDY00544	Canola	plasma membrane	31.78	36.84
Bra040760.1-P	Field mustard	cytosol	34.11	36.58
AT2G29120.1	Thale cress	plasma membrane	38.54	36.55
CDY51113	Canola	plasma membrane	34.66	36.44
CDX85724	Canola	plasma membrane	34.44	36.2
CDY38574	Canola	plasma membrane	38.76	36.19
CDY31755	Canola	cytosol	36.99	36.19
CDY54213	Canola	plasma membrane	35.55	36.11
AT2G24720.1	Thale cress	plasma membrane	36.77	36.09
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	38.87	35.89
Bra040761.1-P	Field mustard	cytosol	36.99	35.88
CDY70035	Canola	cytosol, plasma membrane	32.12	35.85
CDY31756	Canola	cytosol, peroxisome, plastid	34.44	35.83
Bra032063.1-P	Field mustard	plasma membrane	36.54	35.75
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.37	35.58
CDY36173	Canola	plasma membrane	31.45	35.24
CDY39533	Canola	plasma membrane	37.87	35.22
AT5G11210.5	Thale cress	plasma membrane	35.77	35.19
AT2G24710.3	Thale cress	plasma membrane	35.77	35.15
PGSC0003DMT400023744	Potato	cytosol	33.89	35.01
CDY45595	Canola	plasma membrane	33.22	34.88
CDX72325	Canola	plasma membrane	26.02	34.87
CDX73196	Canola	cytosol, peroxisome, plasma membrane	34.99	34.61
CDY56837	Canola	plasma membrane	34.77	34.2
TraesCS5B01G217500.1	Wheat	plasma membrane	35.99	34.14
CDY58212	Canola	cytosol, plasma membrane	31.45	34.05
AT5G11180.2	Thale cress	plasma membrane	36.43	34.02
AT4G31710.2	Thale cress	plasma membrane	33.89	33.55
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	36.77	33.5
TraesCS7B01G057800.1	Wheat	plasma membrane	32.0	32.84
TraesCS6B01G381400.1	Wheat	plasma membrane	36.88	32.84
TraesCS5B01G217100.1	Wheat	plasma membrane	33.78	32.59
TraesCS6B01G380800.1	Wheat	plasma membrane	36.77	32.49
Bra015817.1-P	Field mustard	plasma membrane	36.21	32.41
CDY68132	Canola	plasma membrane	36.21	32.41
CDY63640	Canola	cytosol	19.38	32.23
CDY31759	Canola	cytosol, peroxisome, plasma membrane	16.61	31.85
TraesCS6B01G438400.1	Wheat	plasma membrane	30.79	30.85
CDY13449	Canola	cytosol	32.67	30.76
CDY50141	Canola	plasma membrane	18.05	30.75
Bra023989.1-P	Field mustard	cytosol	33.0	30.25
TraesCS2B01G246200.1	Wheat	plasma membrane	29.9	30.13
TraesCS6B01G065400.1	Wheat	plasma membrane	29.9	29.16
TraesCS6B01G066200.1	Wheat	plasma membrane	29.57	28.99
TraesCS2B01G285400.1	Wheat	plasma membrane	29.79	28.99
TraesCS2B01G477300.4	Wheat	plasma membrane	29.24	28.73
TraesCS6B01G065700.1	Wheat	plasma membrane	29.24	28.6
TraesCS6B01G380900.1	Wheat	plasma membrane	30.45	28.56
TraesCS1B01G418500.1	Wheat	plasma membrane	29.57	28.5
TraesCS6B01G065500.1	Wheat	plasma membrane	28.79	28.08
TraesCS7B01G355500.1	Wheat	plasma membrane	28.79	27.81
VIT_04s0069g00330.t01	Wine grape	plastid	42.08	21.59

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004930	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154
GO:GO:0007165	GO:GO:0007186	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0038023	InterPro:GPCR_3	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497
PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR00248	PANTHER:PTHR43891	PANTHER:PTHR43891:SF19	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5B01G257800	EnsemblPlants:TraesCS5B01G257800.1	TIGR:cd06366	TIGR:cd13686	SEG:seg	:

Description

No Description!

Coordinates

chr5B:+:440201147..440215227

Molecular Weight (calculated)

100482.0 Da

IEP (calculated)

5.495

GRAVY (calculated)

-0.072

Length

903 amino acids

Sequence
(BLAST)

001: MEKTRGAILL LLLVADFGFG AAQNATTGEA HGFHVGVILD LGSPVGKGAR TSVLLAVQDF YAAHQNYSTK LVLHIRDSMG SNVRAASAAI ELLKDYKVQA
101: IIGPQKSSEA VFISNLGNVT QVPIVSFTAT SPSLTSDSMP YFLRATLNDS AQVKSIASLV QAYGWREVVA VYEDTDYGRD ILPYLIYVLQ EIDVRVPYRS
201: VIPLAATSET ILQELNGLIA RQTRVFIVHM SSTMTTLLFM KAKELGMMNK GFVWIITNGV ANIIDSLNPS VLQAMNGVLG VRYYVPRSQE LDDLSIRWNR
301: MYQQDNPDAS PFNKLNIVGL WGYDTTWVLA QAAENVGISS ARNKQPWYIK NSTCLESMDI SIKGHKLLTS IVQNKFRGLS GDFDLTDGRQ LKVSVFQIIN
401: VVGRGWREIG FWNVKSGLSR ELKQDYFKKT GPASMPDLNP VIWPGESTEK PMGWEIPTDG KKLRVGVYSS ENPEFIKTYK DPVTKATTAS GLSVDIFEEA
501: VKRLPFPVSY DYIEFDTGDT ATSGSYNDFV YQVYLQEYDI AVADTTIRYN RTLYVDFTVP YTESGVGMIV PVKENLNMDM WLFLRPLSTA MWFGSIIFFM
601: YTGFVVWLLE YLKDNEHDPF SLEQLAITIF SIFEEKEELK HFLARIVLRV WRVVLLVLAA SYTASFASML TVQQLSPTVT DVHELQKNGE YVGFHQGSFV
701: EGLLLGIDFD ASKIRGYATP DDFYSALSNG SIAALVDEVP YIKLFLAKYN KGYTMVGPIY KSAGFAFALP KNSPLRAELS RAILNITGGE TIIQFEKKWI
801: GQNSHENDGT LDGSGAITFE SFGGLFLLTG IVTTCSPLVA VLMRRYKKQQ ENAENKGDGQ NESGPGQEKE KMEEQGDQNS NGQGLELMKS QTTLSMNACT
901: HPR

Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)

001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.