Factsheet for Bra040758.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31759	Canola	cytosol, peroxisome, plasma membrane	70.99	89.38
Bra040760.1-P	Field mustard	cytosol	83.31	58.67
Bra040761.1-P	Field mustard	cytosol	85.33	54.35
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	75.55	47.97
AT2G29110.2	Thale cress	plasma membrane	72.51	45.36
AT2G29100.2	Thale cress	plasma membrane	69.14	43.52
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	37.1	40.82
HORVU7Hr1G081410.3	Barley	plasma membrane	38.79	40.21
HORVU5Hr1G063490.1	Barley	golgi, vacuole	28.5	39.76
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	47.72	34.18
PGSC0003DMT400067658	Potato	plastid	48.9	34.0
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	49.41	33.83
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	40.98	33.33
VIT_04s0069g00170.t01	Wine grape	plasma membrane	50.08	32.07
VIT_04s0069g00560.t01	Wine grape	plasma membrane	47.89	31.7
HORVU7Hr1G031400.1	Barley	plasma membrane	38.79	31.68
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	35.24	31.62
VIT_04s0069g00670.t01	Wine grape	plasma membrane	48.74	31.45
TraesCS2D01G025600.1	Wheat	plasma membrane	34.06	30.98
VIT_04s0069g00060.t01	Wine grape	plasma membrane	49.75	30.13
VIT_04s0069g00620.t01	Wine grape	plasma membrane	50.25	30.1
Solyc08g006500.2.1	Tomato	extracellular	48.57	29.66
GSMUA_Achr4P02110_001	Banana	cytosol	39.8	29.21
VIT_04s0069g00230.t01	Wine grape	plasma membrane	49.24	28.54
Bra032072.1-P	Field mustard	plasma membrane	42.5	28.12
GSMUA_Achr6P01870_001	Banana	cytosol	41.32	27.97
GSMUA_Achr3P04970_001	Banana	plasma membrane	44.69	27.69
GSMUA_Achr9P13570_001	Banana	plasma membrane	42.33	27.52
GSMUA_AchrUn_...	Banana	golgi	39.29	27.35
OQU89536	Sorghum	cytosol	41.65	27.32
Bra032063.1-P	Field mustard	plasma membrane	42.33	27.19
TraesCS7A01G341200.1	Wheat	plasma membrane	40.64	26.93
Os09t0429000-00	Rice	plasma membrane	42.33	26.9
TraesCS7B01G242400.1	Wheat	plasma membrane	40.98	26.85
TraesCS5D01G226500.2	Wheat	cytosol	39.29	26.6
Os06t0190800-01	Rice	cytosol, plasma membrane	36.42	26.34
Bra023313.1-P	Field mustard	plasma membrane	37.94	26.19
TraesCS7B01G057800.1	Wheat	plasma membrane	38.62	26.02
TraesCS5D01G225900.1	Wheat	golgi	37.61	25.75
KRH50532	Soybean	plasma membrane	35.08	25.74
KXG19504	Sorghum	golgi, plasma membrane, vacuole	37.77	25.72
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	41.15	25.68
VIT_04s0069g00540.t01	Wine grape	plasma membrane	30.52	25.6
TraesCS5A01G218400.1	Wheat	plasma membrane	39.8	25.49
Os09t0429400-00	Rice	golgi	40.13	25.48
Os09t0429500-00	Rice	plasma membrane	40.64	25.48
KRH50533	Soybean	plasma membrane	34.4	25.44
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	41.82	25.36
HORVU5Hr1G063500.1	Barley	plasma membrane	39.63	25.3
HORVU5Hr1G063440.1	Barley	plasma membrane	41.65	25.15
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	41.48	25.05
Os09t0428300-00	Rice	plasma membrane	36.76	25.0
TraesCS5D01G226300.1	Wheat	plasma membrane	40.47	24.97
TraesCS5B01G217500.1	Wheat	plasma membrane	39.97	24.89
HORVU5Hr1G063540.6	Barley	plasma membrane	38.28	24.89
Zm00001d020568_P001	Maize	golgi	40.3	24.87
TraesCS5A01G218000.1	Wheat	plasma membrane	40.98	24.8
TraesCS5D01G226400.1	Wheat	plasma membrane	39.63	24.76
TraesCS5A01G219800.1	Wheat	plasma membrane	38.62	24.76
TraesCS5A01G218200.1	Wheat	plasma membrane	40.3	24.66
TraesCS5B01G217800.1	Wheat	plasma membrane	35.41	24.65
KXG35672	Sorghum	mitochondrion, plasma membrane	40.3	24.64
TraesCS5A01G218300.1	Wheat	plasma membrane	39.63	24.63
TraesCS5D01G227800.1	Wheat	plasma membrane	38.28	24.57
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	36.93	24.5
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	20.57	24.4
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	40.13	24.36
Zm00001d005783_P002	Maize	plasma membrane	39.97	24.31
Os09t0431100-01	Rice	plasma membrane	39.12	24.29
HORVU6Hr1G083680.5	Barley	plasma membrane	41.48	24.28
OQU84757	Sorghum	plasma membrane	37.27	24.26
TraesCS6D01G330900.1	Wheat	plasma membrane	41.15	24.21
TraesCS5B01G217700.1	Wheat	plasma membrane	37.27	24.21
Zm00001d005782_P001	Maize	plasma membrane	39.97	24.18
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	40.3	24.12
HORVU5Hr1G010420.17	Barley	plasma membrane	36.59	24.11
TraesCS5A01G218600.1	Wheat	plasma membrane	37.1	24.1
KXG35671	Sorghum	plasma membrane	39.8	24.08
HORVU5Hr1G072170.1	Barley	plasma membrane	32.38	24.06
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	39.12	24.02
TraesCS6A01G347900.1	Wheat	plasma membrane	40.81	24.01
TraesCS5D01G226600.1	Wheat	plasma membrane	37.61	24.0
Os02t0787600-01	Rice	golgi	39.97	23.99
TraesCS6D01G330500.1	Wheat	plasma membrane	40.81	23.8
TraesCS6B01G380800.1	Wheat	plasma membrane	40.98	23.78
TraesCS6B01G381400.1	Wheat	plasma membrane	40.64	23.77
TraesCS5A01G259100.1	Wheat	cytosol, nucleus, plasma membrane	29.17	23.73
KXG31244	Sorghum	mitochondrion	40.47	23.72
Bra015817.1-P	Field mustard	plasma membrane	40.3	23.69
Zm00001d020563_P001	Maize	plasma membrane	37.94	23.63
TraesCS5D01G266800.1	Wheat	plasma membrane	35.58	23.6
TraesCS5B01G218900.1	Wheat	plasma membrane	37.61	23.57
TraesCS5A01G042800.1	Wheat	plasma membrane	35.58	23.5
TraesCS5D01G228000.1	Wheat	plasma membrane	31.37	23.48
TraesCS5B01G218700.1	Wheat	plasma membrane	36.93	23.47
TraesCS6A01G347400.1	Wheat	plastid	41.15	23.46
HORVU5Hr1G063530.5	Barley	plasma membrane	36.26	23.45
Os09t0429200-00	Rice	plasma membrane	37.44	23.42
TraesCS2D01G462300.1	Wheat	plasma membrane	38.45	23.41
TraesCS3A01G023600.2	Wheat	plasma membrane	35.58	23.39
HORVU6Hr1G083570.16	Barley	plasma membrane	40.13	23.38
TraesCS5B01G257800.1	Wheat	plasma membrane	35.58	23.37
TraesCS6B01G438400.1	Wheat	plasma membrane	35.41	23.31
TraesCS5B01G046400.1	Wheat	plasma membrane	35.24	23.27
TraesCS5D01G051300.1	Wheat	golgi	35.24	23.25
TraesCS5A01G218700.1	Wheat	plasma membrane	35.92	23.23
TraesCS5A01G218900.1	Wheat	plasma membrane	30.35	23.2
TraesCS6B01G380900.1	Wheat	plasma membrane	37.61	23.16
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	39.63	23.15
Zm00001d018329_P001	Maize	plasma membrane	38.79	23.0
Zm00001d018332_P001	Maize	plastid	38.62	22.99
TraesCS5D01G226700.3	Wheat	plasma membrane	35.24	22.79
TraesCS7A01G154100.1	Wheat	plasma membrane	35.92	22.76
EER98937	Sorghum	plasma membrane	35.92	22.54
OQU89527	Sorghum	plasma membrane	35.24	22.47
TraesCS5D01G226000.1	Wheat	plasma membrane	35.24	22.4
TraesCS5D01G226800.1	Wheat	plasma membrane	35.41	22.06
Bra011603.1-P	Field mustard	plasma membrane	33.9	22.02
Bra034931.1-P	Field mustard	plasma membrane	34.4	21.96
TraesCS5B01G217100.1	Wheat	plasma membrane	34.57	21.9
EER98936	Sorghum	plasma membrane	34.91	21.88
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	37.44	21.83
Bra023989.1-P	Field mustard	cytosol	36.09	21.73
HORVU5Hr1G063430.8	Barley	plasma membrane	34.23	21.62
OQU89534	Sorghum	plasma membrane	32.88	21.41
Bra036795.1-P	Field mustard	plasma membrane	31.53	20.99
KXG35670	Sorghum	plasma membrane	34.23	20.78
Bra032480.1-P	Field mustard	plasma membrane	33.22	20.5
Bra005591.1-P	Field mustard	plasma membrane	31.37	20.17
Bra015398.1-P	Field mustard	plasma membrane	32.21	20.08
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	21.42	20.0
Bra005589.1-P	Field mustard	plasma membrane	31.37	19.68
Bra020812.1-P	Field mustard	plasma membrane	33.56	19.63
VIT_04s0069g00720.t01	Wine grape	cytosol	19.22	19.1
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	17.37	18.56
VIT_04s0069g00330.t01	Wine grape	plastid	49.41	16.65
VIT_04s0069g00380.t01	Wine grape	cytosol	10.96	15.85
Os09t0428600-00	Rice	plasma membrane	12.14	13.31
VIT_04s0069g00200.t01	Wine grape	cytosol	9.61	12.93
Bra022887.1-P	Field mustard	plasma membrane	32.38	10.34
Os09t0428750-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra040758	EnsemblPlants:Bra040758.1
EnsemblPlants:Bra040758.1-P	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	UniProt:M4FI29
PFAM:PF00060	PFAM:PF00497	PANTHER:PTHR43891	PANTHER:PTHR43891:SF3	InterPro:Peripla_BP_I	SMART:SM00079
SUPFAM:SSF53822	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000253E874	SEG:seg

Description

AT2G29100 (E=1e-204) ATGLR2.9, GLR2.9 | ATGLR2.9; intracellular ligand-gated ion channel

Coordinates

chrScaffold000251:+:11704..13923

Molecular Weight (calculated)

66684.8 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.098

Length

593 amino acids

Sequence
(BLAST)

001: MAVEKTNTKT YRRTYGPHLL EALSDVEFKG LAGDFKLINR QLESSTFEII NVIGDEERII GFWTPSSGLV NAKSNKTTSF LGKRFGPVIW PGNSNVVPKG
101: WEIPTSGKKI KVGVPVNKGF LNFVEIKTDP ISNVTTATGY AIDIFEAALK ELPYSVIPQY GFEAPGDNYN NLVYQVYEGK WDAVVGDITI TSNRSRYVDF
201: TLPYTESGVS MIVPVRDNKN KNAWVFLKPW SLDLWITTGC FFVLIGFVVR LFEHRVNTDF RGPPHHQIGT RVCFSFSTMV FAHREKVVSN LARFVVVVWC
301: FVVLVLTQSY TANLTSFLTV QSLQPTVTNV KDLISKGESV GYQEGTFVYD LLRDLNFPES QLKPFGSAEE CDDLLSKGTS KRGIAAAFDE VPYLKDIVSE
401: YCSKYAMVEP SFKTAGFKPS FKTAGFGFAF PKNSPMTGDI SRAILKVTQS KEMSLIENKW FNRLNLASDC PDQDTADLSS NRLSVSSFWG LFLIAGVASF
501: LALFVFVALF LYEHRHTLCS NSEGSIWRKL KSLFRIFDEK DIRSHTFKSN AVHNVSSPIT PCTPSPSNVQ IRPLPRSMSL NREFELRREH VYP

Best Arabidopsis Sequence Match ( AT2G29110.2 )
(BLAST)

001: MMNPKKNNNT FLSYFVCLFL LLEVGLGQNQ ISEIKVGVVL DLNTTFSKIC LTSINLALSD FYKDHPNYRT RLALHVRDSM KDTVQASAAA LDLIQNEQVS
101: AIIGPIDSMQ AKFMIKLANK TQVPTISFSA TSPLLTSIKS DYFVRGTIDD SYQVKAIAAI FESFGWRSVV AIYVDNELGE GIMPYLFDAL QDVQVDRSVI
201: PSEANDDQIL KELYKLMTRQ TRVFVVHMAS RLASRIFEKA TEIGMMEEGY VWLMTNGMTH MMRHIHHGRS LNTIDGVLGV RSHVPKSKGL EDFRLRWKRN
301: FKKENPWLRD DLSIFGLWAY DSTTALAMAV EKTNISSFPY NNASGSSNNM TDLGTLHVSR YGPSLLEALS EIRFNGLAGR FNLIDRQLES PKFEIINFVG
401: NEERIVGFWT PSNGLVNVNS NKTTSFTGER FGPLIWPGKS TIVPKGWEIP TNGKKIKVGV PVKKGFFNFV EVITDPITNI TTPKGYAIDI FEAALKKLPY
501: SVIPQYYRFE SPDDDYDDLV YKVDNGTLDA VVGDVTITAY RSLYADFTLP YTESGVSMMV PVRDNENKNT WVFLKPWGLD LWVTTACFFV LIGFVVWLFE
601: HRVNTDFRGP PHHQIGTSFW FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAN LTSFLTVQRF QPAAINVKDL IKNGDYVGYQ HGAFVKDFLI
701: KEGFNVSKLK PFGSSEECHA LLSNGSISAA FDEVAYLRAI LSQYCSKYAI VEPTFKTAGF GFAFPRNSPL TGDVSKAILN VTQGDEMQHI ENKWFMKQND
801: CPDPKTALSS NRLSLRSFWG LFLIAGIASF LALLIFVFLF LYENRHTLCD DSEDSIWRKL TSLFRNFDEK DIKSHTFKSS AVHHVSSPMT QYIPSPSTLQ
901: IAPRPHSPSQ DRAFELRRVS FTPNEERLTT QTIHFEDEES DIECVVEQ

Arabidopsis Description

ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.