Factsheet for TraesCS5A01G259100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	53.64	61.57
HORVU5Hr1G072170.1	Barley	plasma membrane	66.94	61.15
TraesCS5A01G042800.1	Wheat	plasma membrane	69.14	56.12
TraesCS5A01G218600.1	Wheat	plasma membrane	67.49	53.89
OQU89534	Sorghum	plasma membrane	59.67	47.75
EER98936	Sorghum	plasma membrane	61.87	47.67
TraesCS5A01G219800.1	Wheat	plasma membrane	52.81	41.62
TraesCS5A01G218900.1	Wheat	plasma membrane	43.48	40.85
TraesCS7A01G341200.1	Wheat	plasma membrane	48.42	39.44
TraesCS5A01G218700.1	Wheat	plasma membrane	48.29	38.39
TraesCS5A01G218400.1	Wheat	plasma membrane	48.42	38.12
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	39.92	35.14
GSMUA_Achr3P04970_001	Banana	plasma membrane	44.86	34.17
VIT_04s0069g00200.t01	Wine grape	cytosol	20.3	33.56
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	38.96	32.79
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	24.55	32.25
VIT_04s0069g00560.t01	Wine grape	plasma membrane	39.37	32.03
VIT_04s0069g00170.t01	Wine grape	plasma membrane	40.05	31.53
VIT_04s0069g00380.t01	Wine grape	cytosol	17.7	31.46
GSMUA_Achr9P13570_001	Banana	plasma membrane	38.96	31.14
PGSC0003DMT400023744	Potato	cytosol	36.9	30.78
VIT_04s0069g00670.t01	Wine grape	plasma membrane	38.68	30.69
CDX72325	Canola	plasma membrane	27.85	30.12
VIT_04s0069g00620.t01	Wine grape	plasma membrane	40.88	30.1
Bra023313.1-P	Field mustard	plasma membrane	35.12	29.8
CDY51113	Canola	plasma membrane	35.12	29.8
VIT_04s0069g00720.t01	Wine grape	cytosol	24.14	29.48
CDX85724	Canola	plasma membrane	34.71	29.45
KRH50533	Soybean	plasma membrane	32.24	29.3
CDY70035	Canola	cytosol, plasma membrane	32.51	29.3
CDY36173	Canola	plasma membrane	32.37	29.28
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.73	29.17
Bra032072.1-P	Field mustard	plasma membrane	35.8	29.13
VIT_04s0069g00060.t01	Wine grape	plasma membrane	38.82	28.91
AT2G29110.2	Thale cress	plasma membrane	36.76	28.27
CDY31759	Canola	cytosol, peroxisome, plasma membrane	18.24	28.24
Solyc08g006500.2.1	Tomato	extracellular	37.59	28.22
VIT_04s0069g00230.t01	Wine grape	plasma membrane	39.37	28.05
AT5G27100.1	Thale cress	plasma membrane	34.57	27.97
Bra032063.1-P	Field mustard	plasma membrane	35.39	27.95
AT2G24720.1	Thale cress	plasma membrane	35.12	27.83
AT2G29120.1	Thale cress	plasma membrane	36.21	27.73
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	35.53	27.73
AT2G29100.2	Thale cress	plasma membrane	35.8	27.71
CDY58212	Canola	cytosol, plasma membrane	31.69	27.7
VIT_04s0069g00540.t01	Wine grape	plasma membrane	26.75	27.58
CDY45595	Canola	plasma membrane	32.51	27.56
CDY31756	Canola	cytosol, peroxisome, plastid	32.65	27.42
CDX73196	Canola	cytosol, peroxisome, plasma membrane	34.16	27.27
CDY54213	Canola	plasma membrane	32.92	27.0
AT2G24710.3	Thale cress	plasma membrane	33.88	26.88
AT5G11210.5	Thale cress	plasma membrane	33.47	26.58
KRH50532	Soybean	plasma membrane	29.22	26.36
Bra040760.1-P	Field mustard	cytosol	30.32	26.25
TraesCS5A01G218000.1	Wheat	plasma membrane	35.25	26.22
CDY38574	Canola	plasma membrane	34.71	26.16
AT5G11180.2	Thale cress	plasma membrane	34.57	26.06
CDY39533	Canola	plasma membrane	34.57	25.95
CDY00544	Canola	plasma membrane	27.71	25.93
TraesCS3A01G023600.2	Wheat	plasma membrane	31.96	25.83
CDY56837	Canola	plasma membrane	32.51	25.82
CDY31755	Canola	cytosol	32.37	25.57
AT4G31710.2	Thale cress	plasma membrane	31.96	25.55
TraesCS5A01G218200.1	Wheat	plasma membrane	33.88	25.49
Bra040761.1-P	Field mustard	cytosol	32.37	25.35
CDY63640	Canola	cytosol	18.38	24.68
CDY68132	Canola	plasma membrane	33.74	24.38
Bra015817.1-P	Field mustard	plasma membrane	33.74	24.38
TraesCS6A01G347900.1	Wheat	plasma membrane	33.61	24.31
TraesCS5A01G218300.1	Wheat	plasma membrane	31.55	24.11
TraesCS6A01G347400.1	Wheat	plastid	34.29	24.04
TraesCS7A01G154100.1	Wheat	plasma membrane	30.32	23.61
Bra023989.1-P	Field mustard	cytosol	31.55	23.35
CDY50141	Canola	plasma membrane	16.32	22.45
CDY13449	Canola	cytosol	29.49	22.42
TraesCS2A01G220700.1	Wheat	plasma membrane	28.12	22.09
TraesCS2A01G257200.1	Wheat	plasma membrane	26.89	21.1
TraesCS6A01G048700.1	Wheat	plasma membrane	26.61	20.95
TraesCS6A01G049000.1	Wheat	plasma membrane	26.61	20.84
TraesCS6A01G049900.1	Wheat	plasma membrane	25.93	20.48
TraesCS1A01G390300.2	Wheat	plasma membrane	26.2	20.36
TraesCS6A01G048800.1	Wheat	plasma membrane	25.79	20.3
TraesCS2A01G455200.2	Wheat	plasma membrane	24.97	19.8
TraesCS7A01G455200.1	Wheat	plasma membrane	25.1	19.59
VIT_04s0069g00330.t01	Wine grape	plastid	39.37	16.31

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	PFAM:PF00060
PFAM:PF00497	PFAM:PF01094	PANTHER:PTHR43891	PANTHER:PTHR43891:SF11	InterPro:Peripla_BP_I	SMART:SM00079
SUPFAM:SSF53822	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G259100	EnsemblPlants:TraesCS5A01G259100.1
TIGR:cd06366	TIGR:cd13686	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5A:+:473618444..473625153

Molecular Weight (calculated)

82261.1 Da

IEP (calculated)

8.300

GRAVY (calculated)

-0.151

Length

729 amino acids

Sequence
(BLAST)

001: MSYFVRATLD DSTQVKSIAA LVQACGWREV VAVYEDTDYG RGILPYLIDA LQEIDVCVPY RSVIPLSATN ETIMQELGVL IAMQTRVFIV HMSSTMASLI
101: FTKAKEVGMM NKGFAWITTN GVANIIDSLN PSVIEAMDGV LGVRCHVPRS QELDNLSIRW NIMYQQDNPY ESPFNKLSIV GLWGYDTIWA IAHAAEKVGI
201: SSARDKQPWP TKNSTCLESM VISTNGPELL SAIVQNKFRG LSGEFDLTDR QQLKVSVFQI INVVERGWRE IGFWTVNELL RKLKQDYSKK TGQASMLDLN
301: PVIWPGESTE IPMGWEIPRV EFDTADAPIS GSYNDFVYQV YLQKYDIAVA DITIRSNRSL YVDFTAPYTE SGVGMIVPVK ENVNTDMWLF LKPLSTEMWF
401: GSINATKEIR RVLLHHNQQE EELKRFLARI VLRVWRVVLL VLAASYTASF ASMLTVQQLS PTVTDVHELQ KNGQYVGFHQ GSYVEGLLLD IGFHTSKIRP
501: YATPDDFYSA LSNGSIAALV HEVPYIKLFL AKYSKGYTMV APIYKSVGFA FTFDNLSTTT LKALPRNSPL APEMSRAIIN ITEGDTIIQF EKKWMGQNSH
601: ENDGTLDGSD AITFESFGGL FALTVIVTTY CLLVAMVMSC YKRYRQNART IGEVAKMNVG MGKKKRKREN RGYDQSEYGH GQRKKRKWKS KEITRAMKTE
701: TELIGSQTTL SVLHNRNRNG HQLPISVHH

Best Arabidopsis Sequence Match ( AT2G29110.1 )
(BLAST)

001: MNPKKNNNTF LSYFVCLFLL LEVGLGQNQI SEIKVGVVLD LNTTFSKICL TSINLALSDF YKDHPNYRTR LALHVRDSMK DTVQASAAAL DLIQNEQVSA
101: IIGPIDSMQA KFMIKLANKT QVPTISFSAT SPLLTSIKSD YFVRGTIDDS YQVKAIAAIF ESFGWRSVVA IYVDNELGEG IMPYLFDALQ DVQVDRSVIP
201: SEANDDQILK ELYKLMTRQT RVFVVHMASR LASRIFEKAT EIGMMEEGYV WLMTNGMTHM MRHIHHGRSL NTIDGVLGVR SHVPKSKGLE DFRLRWKRNF
301: KKENPWLRDD LSIFGLWAYD STTALAMAVE KTNISSFPYN NASGSSNNMT DLGTLHVSRY GPSLLEALSE IRFNGLAGRF NLIDRQLESP KFEIINFVGN
401: EERIVGFWTP SNGLVNVNSN KTTSFTGERF GPLIWPGKST IVPKGWEIPT NGKKIKVGVP VKKGFFNFVE VITDPITNIT TPKGYAIDIF EAALKKLPYS
501: VIPQYYRFES PDDDYDDLVY KVDNGTLDAV VGDVTITAYR SLYADFTLPY TESGVSMMVP VRDNENKNTW VFLKPWGLDL WVTTACFFVL IGFVVWLFEH
601: RVNTDFRGPP HHQIGTSFWF SFSTMVFAHR EKVVSNLARF VVVVWCFVVL VLTQSYTANL TSFLTVQRFQ PAAINVKDLI KNGDYVGYQH GAFVKDFLIK
701: EGFNVSKLKP FGSSEECHAL LSNGSISAAF DEVAYLRAIL SQYCSKYAIV EPTFKTAGFG FAFPRNSPLT GDVSKAILNV TQGDEMQHIE NKWFMKQNDC
801: PDPKTALSSN RLSLRSFWGL FLIAGIASFL ALLIFVFLFL YENRHTLCDD SEDSIWRKLT SLFRNFDEKD IKSHTFKSSA VHHVSSPMTQ YIPSPSTLQI
901: APRPHSPSQD RAFELRRVSF TPNEERLTTQ TIHFEDEESD IECVVEQ

Arabidopsis Description

ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.