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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31759 Canola cytosol, peroxisome, plasma membrane 72.45 81.53
CDY70035 Canola cytosol, plasma membrane 80.19 52.53
CDY31756 Canola cytosol, peroxisome, plastid 76.42 46.66
CDY31755 Canola cytosol 80.38 46.15
CDY58212 Canola cytosol, plasma membrane 72.45 46.04
HORVU5Hr1G063490.1 Barley golgi, vacuole 32.83 40.94
CDY39533 Canola plasma membrane 74.53 40.68
CDY38574 Canola plasma membrane 73.96 40.54
AT2G29100.2 Thale cress plasma membrane 70.57 39.7
AT2G29110.2 Thale cress plasma membrane 69.25 38.71
CDY71348 Canola golgi, plasma membrane 16.04 32.08
CDX80728 Canola cytosol 13.96 30.58
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 30.38 29.87
HORVU7Hr1G081410.3 Barley plasma membrane 30.19 27.97
GSMUA_Achr6P26740_001 Banana cytosol, plasma membrane, plastid 33.77 27.08
CDX75491 Canola cytosol, plasma membrane, plastid 10.38 26.96
VIT_04s0069g00170.t01 Wine grape plasma membrane 45.66 26.13
VIT_04s0069g00670.t01 Wine grape plasma membrane 44.72 25.79
VIT_04s0069g00560.t01 Wine grape plasma membrane 43.58 25.78
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 39.81 25.48
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 41.51 25.4
VIT_04s0069g00620.t01 Wine grape plasma membrane 46.98 25.15
GSMUA_AchrUn_... Banana golgi 40.19 25.0
VIT_04s0069g00060.t01 Wine grape plasma membrane 45.66 24.72
GSMUA_Achr7P16350_001 Banana cytosol, peroxisome, plasma membrane 33.77 24.55
VIT_04s0069g00230.t01 Wine grape plasma membrane 46.23 23.95
Solyc08g006500.2.1 Tomato extracellular 43.4 23.69
PGSC0003DMT400067658 Potato plastid 38.11 23.68
KRH50533 Soybean plasma membrane 35.09 23.19
GSMUA_Achr4P02110_001 Banana cytosol 34.34 22.52
GSMUA_Achr6P01870_001 Banana cytosol 37.17 22.49
CDY00544 Canola plasma membrane 32.83 22.34
HORVU7Hr1G031400.1 Barley plasma membrane 30.57 22.31
KRH50532 Soybean plasma membrane 33.77 22.15
CDX72325 Canola plasma membrane 28.11 22.11
GSMUA_Achr9P13570_001 Banana plasma membrane 37.36 21.71
Os09t0431200-01 Rice endoplasmic reticulum, extracellular 38.87 21.68
TraesCS5D01G226300.1 Wheat plasma membrane 39.25 21.64
GSMUA_Achr3P04970_001 Banana plasma membrane 38.87 21.53
HORVU5Hr1G063440.1 Barley plasma membrane 39.81 21.49
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 39.62 21.47
TraesCS5A01G218200.1 Wheat plasma membrane 39.06 21.36
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 39.43 21.28
CDY45595 Canola plasma membrane 34.53 21.28
KXG19504 Sorghum golgi, plasma membrane, vacuole 34.91 21.24
KXG35672 Sorghum mitochondrion, plasma membrane 38.87 21.24
Zm00001d020568_P001 Maize golgi 38.3 21.12
TraesCS5A01G218000.1 Wheat plasma membrane 39.06 21.12
HORVU5Hr1G063480.2 Barley golgi, plasma membrane 38.87 21.09
CDY56837 Canola plasma membrane 36.42 21.02
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 39.25 20.99
GSMUA_Achr6P01860_001 Banana cytosol, peroxisome, plasma membrane 38.11 20.91
Zm00001d005783_P002 Maize plasma membrane 38.3 20.82
TraesCS5B01G217500.1 Wheat plasma membrane 37.36 20.8
Os09t0429000-00 Rice plasma membrane 36.6 20.79
TraesCS7B01G242400.1 Wheat plasma membrane 35.28 20.66
TraesCS5D01G226400.1 Wheat plasma membrane 36.98 20.65
TraesCS2D01G462300.1 Wheat plasma membrane 37.92 20.64
TraesCS5D01G225900.1 Wheat golgi 33.58 20.55
TraesCS5A01G218300.1 Wheat plasma membrane 36.98 20.55
TraesCS5B01G217000.1 Wheat mitochondrion, plasma membrane 34.53 20.47
TraesCS7A01G341200.1 Wheat plasma membrane 34.53 20.45
TraesCS2D01G025600.1 Wheat plasma membrane 25.09 20.4
KXG31244 Sorghum mitochondrion 38.87 20.36
TraesCS6D01G330900.1 Wheat plasma membrane 38.68 20.34
TraesCS5D01G226500.2 Wheat cytosol 33.58 20.32
OQU84757 Sorghum plasma membrane 34.91 20.31
Os02t0787600-01 Rice golgi 37.74 20.24
CDY36173 Canola plasma membrane 30.75 20.22
Zm00001d018329_P001 Maize plasma membrane 38.11 20.2
OQU89536 Sorghum cytosol 34.34 20.13
KXG35671 Sorghum plasma membrane 37.17 20.1
Zm00001d005782_P001 Maize plasma membrane 37.17 20.1
TraesCS5A01G218400.1 Wheat plasma membrane 35.09 20.09
CDX85724 Canola plasma membrane 32.45 20.02
CDY51113 Canola plasma membrane 32.45 20.02
CDY54213 Canola plasma membrane 33.58 20.02
HORVU5Hr1G063500.1 Barley plasma membrane 35.09 20.02
Os09t0429400-00 Rice golgi 35.28 20.02
TraesCS7B01G057800.1 Wheat plasma membrane 33.21 20.0
Zm00001d018332_P001 Maize plastid 37.55 19.98
TraesCS6D01G330500.1 Wheat plasma membrane 38.3 19.96
Os09t0428300-00 Rice plasma membrane 32.83 19.95
HORVU6Hr1G083570.16 Barley plasma membrane 38.3 19.94
HORVU6Hr1G083680.5 Barley plasma membrane 38.11 19.94
TraesCS6B01G380800.1 Wheat plasma membrane 38.3 19.86
TraesCS6A01G347900.1 Wheat plasma membrane 37.74 19.84
TraesCS5D01G227800.1 Wheat plasma membrane 34.53 19.81
Os09t0431100-01 Rice plasma membrane 35.66 19.79
TraesCS6B01G381400.1 Wheat plasma membrane 37.74 19.72
TraesCS6A01G347400.1 Wheat plastid 38.68 19.71
TraesCS5A01G219800.1 Wheat plasma membrane 34.34 19.68
Os09t0429500-00 Rice plasma membrane 35.09 19.66
TraesCS7A01G154100.1 Wheat plasma membrane 34.34 19.44
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 36.98 19.31
TraesCS6B01G438400.1 Wheat plasma membrane 32.64 19.2
TraesCS6B01G380900.1 Wheat plasma membrane 34.72 19.11
HORVU5Hr1G063540.6 Barley plasma membrane 32.64 18.97
TraesCS5D01G228000.1 Wheat plasma membrane 28.3 18.94
Os09t0429200-00 Rice plasma membrane 33.77 18.88
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 36.23 18.88
TraesCS5B01G218700.1 Wheat plasma membrane 33.21 18.86
TraesCS5B01G218900.1 Wheat plasma membrane 33.58 18.82
TraesCS5B01G217700.1 Wheat plasma membrane 32.26 18.73
OQU89527 Sorghum plasma membrane 32.64 18.6
EER98937 Sorghum plasma membrane 33.02 18.52
CDY35797 Canola plasma membrane 28.68 18.49
HORVU5Hr1G063530.5 Barley plasma membrane 31.7 18.32
TraesCS5D01G226600.1 Wheat plasma membrane 32.08 18.3
CDX73196 Canola cytosol, peroxisome, plasma membrane 31.51 18.29
TraesCS5A01G218600.1 Wheat plasma membrane 31.51 18.29
VIT_04s0069g00540.t01 Wine grape plasma membrane 24.34 18.25
TraesCS5D01G226000.1 Wheat plasma membrane 31.89 18.11
TraesCS5A01G218700.1 Wheat plasma membrane 31.32 18.1
Zm00001d020563_P001 Maize plasma membrane 32.45 18.07
TraesCS5B01G257800.1 Wheat plasma membrane 30.75 18.05
TraesCS5D01G226700.3 Wheat plasma membrane 31.13 17.99
TraesCS3A01G023600.2 Wheat plasma membrane 30.38 17.85
TraesCS5B01G217100.1 Wheat plasma membrane 31.51 17.84
TraesCS5B01G217800.1 Wheat plasma membrane 28.68 17.84
HORVU5Hr1G010420.17 Barley plasma membrane 30.19 17.78
CDY68132 Canola plasma membrane 33.77 17.74
CDX73718 Canola plasma membrane 29.62 17.62
TraesCS5A01G042800.1 Wheat plasma membrane 29.81 17.59
TraesCS5B01G046400.1 Wheat plasma membrane 29.81 17.59
TraesCS5D01G051300.1 Wheat golgi 29.62 17.46
CDY06165 Canola plasma membrane 28.68 17.45
TraesCS5D01G226800.1 Wheat plasma membrane 31.32 17.44
HORVU5Hr1G072170.1 Barley plasma membrane 26.23 17.42
TraesCS5A01G218900.1 Wheat plasma membrane 25.47 17.4
CDX78008 Canola plasma membrane 29.25 17.4
Os06t0190800-01 Rice cytosol, plasma membrane 26.79 17.32
HORVU5Hr1G063430.8 Barley plasma membrane 30.38 17.15
TraesCS5D01G266800.1 Wheat plasma membrane 28.87 17.11
CDY24327 Canola plasma membrane 29.43 17.11
CDY13449 Canola cytosol 30.75 17.0
CDX69127 Canola plasma membrane 29.25 17.0
CDY52597 Canola plasma membrane 29.25 17.0
OQU89534 Sorghum plasma membrane 29.06 16.9
EER98936 Sorghum plasma membrane 29.62 16.6
KXG35670 Sorghum plasma membrane 30.57 16.58
CDY10044 Canola plasma membrane 29.25 16.51
CDX76331 Canola plasma membrane 28.3 16.48
CDY49512 Canola plasma membrane 29.43 16.37
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 22.45 16.32
CDY46839 Canola plasma membrane 28.87 16.09
CDY15337 Canola plasma membrane 26.23 15.55
CDX84734 Canola plasma membrane 26.79 15.33
CDY12210 Canola plasma membrane 26.6 15.31
CDY48270 Canola plasma membrane 26.6 15.29
CDY66699 Canola plasma membrane 26.6 15.23
CDY65624 Canola plasma membrane 24.34 14.83
VIT_04s0069g00330.t01 Wine grape plastid 46.6 14.03
CDY48271 Canola plastid 19.25 13.8
CDY12211 Canola plasma membrane 20.0 11.92
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 13.77 11.5
CDY66698 Canola plasma membrane 19.25 11.47
CDX84735 Canola plasma membrane 18.87 11.26
VIT_04s0069g00720.t01 Wine grape cytosol 12.08 10.72
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 9.06 9.6
CDX95758 Canola cytosol 7.36 9.58
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 8.87 8.47
VIT_04s0069g00200.t01 Wine grape cytosol 5.28 6.35
VIT_04s0069g00380.t01 Wine grape cytosol 4.15 5.37
Os09t0428600-00 Rice plasma membrane 5.09 4.99
Os09t0428750-01 Rice mitochondrion 1.13 4.96
CDX75490 Canola extracellular, plasma membrane, vacuole 3.58 3.26
CDY68928 Canola extracellular, plasma membrane 3.02 3.0
CDY70557 Canola extracellular, plasma membrane 3.02 3.0
CDY63640 Canola cytosol 0.94 0.92
CDY72467 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10GO:A0A078IJG6UniProt:A0A078IJG6EnsemblPlants:CDY50141
ProteinID:CDY50141ProteinID:CDY50141.1GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00095969001
InterPro:Iontro_rcptPFAM:PF00060PFAM:PF00497PANTHER:PTHR43891PANTHER:PTHR43891:SF3SMART:SM00079
SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EF198DSEG:seg:
Description
BnaC04g40300DBnaC04g40300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJG6]
Coordinates
chrLK032884:-:36757..42493
Molecular Weight (calculated)
59600.5 Da
IEP (calculated)
8.897
GRAVY (calculated)
-0.068
Length
530 amino acids
Sequence
(BLAST)
001: MMNPTKANNI FLGVPFFWGF MMMNVGLRKN PTSEIKIGIV LDLQTPFSQI CLTSINMSLS DFYENHSNYT TRLAIHIRDS LEDPVQASAA VVGDITITSN
101: RSSYVDFTLP YTESGVSMIV PVRDNKNKNA WVFLKPWSLD LWITTGCFFV FIGFVVWLFE HRVNTDFRGP PHHQIGTSVC FSFSTMVFAH REKVVSNLAR
201: FVVVVWCFVV LVLTQSYTAS LTSFLTVQSL HPTATNVEDL IRSGESVGYQ QGGFVKDILL GLKFSESQLK PFGSAEECDD LLSKGTSKGG IAAAFDEVPY
301: LKDIVSQYCS KYAMVEPSFK TAGFKPSFKT AGFGFAFPKN SPMTGDISRA ILKVTQSKEM SLIENKWFNR LNLASDCPDQ ATADLSSNRL SVSSFWGLFL
401: IAGVASFLAL LVFVALFLYE HRHTLCSKSE GSIWRKLKSL FRIFDEKDTR SHTFKSNAVH NVSSPITPSP SNVQIRPLPR SMSLNREFEL RRACFSMSKE
501: RFRTQPKHDK HGESDIEFGA ERQREAKQTP
Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)
001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ
Arabidopsis Description
ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.