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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75491 Canola cytosol, plasma membrane, plastid 45.45 53.92
CDY71348 Canola golgi, plasma membrane 46.69 42.64
CDY35797 Canola plasma membrane 100.0 29.44
AT1G42540.2 Thale cress plasma membrane 88.43 22.94
CDY31759 Canola cytosol, peroxisome, plasma membrane 31.82 16.35
PGSC0003DMT400025675 Potato plasma membrane 62.81 16.33
Solyc04g082610.2.1 Tomato plasma membrane 61.98 16.16
VIT_18s0122g00990.t01 Wine grape plasma membrane 60.33 15.63
KRH60898 Soybean plasma membrane 58.68 15.35
KRH51581 Soybean plasma membrane 57.85 15.07
HORVU0Hr1G018770.1 Barley plasma membrane 47.93 14.45
CDX73718 Canola plasma membrane 52.89 14.37
CDX78008 Canola plasma membrane 52.48 14.25
GSMUA_Achr5P19180_001 Banana plasma membrane 52.48 14.11
GSMUA_Achr9P23900_001 Banana plasma membrane 53.31 14.05
CDY50141 Canola plasma membrane 30.58 13.96
CDY65624 Canola plasma membrane 48.35 13.45
GSMUA_Achr3P27050_001 Banana plasma membrane 50.83 13.44
CDX69127 Canola plasma membrane 49.17 13.05
CDY48271 Canola plastid 39.67 12.99
CDY24327 Canola plasma membrane 48.76 12.94
CDY52597 Canola plasma membrane 48.35 12.83
TraesCS6B01G066200.1 Wheat plasma membrane 48.76 12.81
TraesCS6B01G065700.1 Wheat plasma membrane 48.76 12.78
TraesCSU01G108800.1 Wheat plasma membrane 48.76 12.78
TraesCSU01G108000.1 Wheat plasma membrane 48.76 12.77
Zm00001d015007_P003 Maize plasma membrane 47.52 12.76
TraesCS6B01G065400.1 Wheat plasma membrane 48.76 12.74
TraesCS6A01G048700.1 Wheat plasma membrane 48.76 12.74
TraesCS2B01G477300.4 Wheat plasma membrane 48.35 12.73
TraesCS6A01G049000.1 Wheat plasma membrane 48.76 12.67
TraesCSU01G107700.2 Wheat plasma membrane 48.35 12.63
TraesCS2A01G455200.2 Wheat plasma membrane 47.93 12.62
TraesCS2D01G455600.2 Wheat plasma membrane 47.93 12.62
Os02t0117500-01 Rice plasma membrane 49.17 12.61
TraesCS6A01G049900.1 Wheat plasma membrane 47.93 12.57
HORVU2Hr1G049510.4 Barley plasma membrane 48.35 12.54
HORVU0Hr1G036590.3 Barley plasma membrane 48.35 12.54
HORVU6Hr1G009520.1 Barley plasma membrane 47.93 12.53
KXG29299 Sorghum plasma membrane 47.93 12.53
TraesCS6B01G065500.1 Wheat plasma membrane 47.93 12.53
TraesCS6A01G048800.1 Wheat plasma membrane 47.52 12.42
TraesCSU01G107900.1 Wheat plasma membrane 47.52 12.42
CDX76331 Canola plasma membrane 46.69 12.42
Zm00001d054016_P004 Maize plasma membrane 48.76 12.41
CDY06165 Canola plasma membrane 44.21 12.28
HORVU2Hr1G104920.3 Barley plasma membrane 47.93 12.21
KXG26996 Sorghum plasma membrane 47.11 12.19
Zm00001d002532_P003 Maize plasma membrane 45.45 11.82
OQU84212 Sorghum mitochondrion 43.8 11.66
CDY10044 Canola plasma membrane 43.8 11.29
CDX84735 Canola plasma membrane 41.32 11.26
CDY66698 Canola plasma membrane 41.32 11.25
CDY46839 Canola plasma membrane 43.8 11.15
CDY49512 Canola plasma membrane 43.39 11.02
CDY15337 Canola plasma membrane 39.26 10.63
CDY12211 Canola plasma membrane 38.84 10.57
CDY48270 Canola plasma membrane 40.08 10.52
CDY12210 Canola plasma membrane 39.26 10.31
CDX84734 Canola plasma membrane 38.84 10.15
CDY66699 Canola plasma membrane 38.43 10.04
CDY70035 Canola cytosol, plasma membrane 31.82 9.52
CDY58212 Canola cytosol, plasma membrane 30.99 8.99
CDX72325 Canola plasma membrane 23.97 8.61
CDY31756 Canola cytosol, peroxisome, plastid 30.17 8.41
CDY31755 Canola cytosol 30.17 7.91
CDY38574 Canola plasma membrane 29.34 7.34
CDY39533 Canola plasma membrane 29.34 7.31
CDY51113 Canola plasma membrane 24.38 6.87
CDY36173 Canola plasma membrane 22.73 6.82
CDY00544 Canola plasma membrane 21.9 6.8
CDX85724 Canola plasma membrane 23.55 6.64
CDY54213 Canola plasma membrane 23.97 6.52
CDY45595 Canola plasma membrane 23.14 6.51
CDX73196 Canola cytosol, peroxisome, plasma membrane 23.97 6.35
CDY56837 Canola plasma membrane 23.55 6.21
CDY13449 Canola cytosol 24.38 6.15
CDY68132 Canola plasma membrane 25.21 6.05
CDX75490 Canola extracellular, plasma membrane, vacuole 3.72 1.55
CDY63640 Canola cytosol 1.24 0.55
Os02t0117600-01 Rice plastid 0.41 0.41
CDY68928 Canola extracellular, plasma membrane 0.83 0.38
CDY70557 Canola extracellular, plasma membrane 0.83 0.38
CDX95758 Canola cytosol 0.0 0.0
Os04t0585200-02 Rice extracellular 0.0 0.0
CDY72467 Canola cytosol 0.0 0.0
Zm00001d033769_P001 Maize golgi, plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10GO:A0A078D047EnsemblPlants:CDX80728ProteinID:CDX80728
ProteinID:CDX80728.1GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0038023
EnsemblPlantsGene:GSBRNA2T00134038001InterPro:Iontro_rcptPFAM:PF00497PANTHER:PTHR43891PANTHER:PTHR43891:SF8SMART:SM00079
SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EEAD9E::
Description
BnaC08g05620D
Coordinates
chrLK031822:-:1479239..1480205
Molecular Weight (calculated)
27284.3 Da
IEP (calculated)
5.447
GRAVY (calculated)
-0.396
Length
242 amino acids
Sequence
(BLAST)
001: MDDRIGYQVG SFAERYLRDE LNISESRLVP LGSPEAYAKA LKDGPRKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI
101: LELAENGDLQ RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC VLALFLYFVQ IIRQLYNGKP SEEEEDAIGR ENHDSSSLRS TRLQRFLSLM
201: DEKEDVSKAG SKKRKIDGSV NDNSVSRHSR RLDSFNSVNP LD
Best Arabidopsis Sequence Match ( AT1G42540.1 )
(BLAST)
001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD
Arabidopsis Description
GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.