Factsheet for TraesCS2B01G477300.4

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 6
extracellular 3
golgi 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G455600.2	Wheat	plasma membrane	96.41	96.41
TraesCS2A01G455200.2	Wheat	plasma membrane	96.19	96.19
HORVU2Hr1G104920.3	Barley	plasma membrane	93.8	90.74
KXG26996	Sorghum	plasma membrane	72.36	71.12
Zm00001d002532_P003	Maize	plasma membrane	71.71	70.78
Os04t0585200-02	Rice	extracellular	40.7	69.26
GSMUA_Achr5P19180_001	Banana	plasma membrane	61.92	63.22
Solyc04g082610.2.1	Tomato	plasma membrane	58.76	58.19
PGSC0003DMT400025675	Potato	plasma membrane	58.22	57.47
VIT_18s0122g00990.t01	Wine grape	plasma membrane	58.11	57.17
KRH60898	Soybean	plasma membrane	57.13	56.76
TraesCS6B01G066200.1	Wheat	plasma membrane	56.8	56.68
TraesCS6B01G065400.1	Wheat	plasma membrane	56.69	56.26
KRH51581	Soybean	plasma membrane	56.8	56.19
TraesCS6B01G065500.1	Wheat	plasma membrane	55.71	55.29
TraesCS6B01G065700.1	Wheat	plasma membrane	55.17	54.93
VIT_03s0038g03920.t01	Wine grape	plasma membrane	54.52	54.63
VIT_07s0031g02170.t01	Wine grape	plasma membrane	55.5	54.49
KRH39417	Soybean	golgi, plasma membrane, plastid	54.19	53.55
CDY35797	Canola	plasma membrane	47.88	53.53
AT1G42540.2	Thale cress	plasma membrane	54.19	53.38
KRH28939	Soybean	plasma membrane	53.97	52.88
KRH76527	Soybean	plasma membrane	53.86	52.77
Bra034931.1-P	Field mustard	plasma membrane	53.21	52.64
KRH07800	Soybean	plasma membrane	52.34	52.51
KRH14012	Soybean	plasma membrane	52.12	52.35
KRH39414	Soybean	plasma membrane	53.54	52.23
TraesCS2B01G285400.1	Wheat	plasma membrane	52.56	52.05
Solyc02g082480.2.1	Tomato	plasma membrane	54.08	51.88
TraesCS2B01G246200.1	Wheat	plasma membrane	50.38	51.67
CDX73718	Canola	plasma membrane	50.05	51.63
Bra036795.1-P	Field mustard	plasma membrane	49.73	51.29
CDX78008	Canola	plasma membrane	49.73	51.29
CDX76331	Canola	plasma membrane	50.71	51.21
AT3G51480.1	Thale cress	plasma membrane	50.27	51.16
CDY52597	Canola	plasma membrane	50.71	51.1
KRH39412	Soybean	plasma membrane	52.56	51.0
CDY71348	Canola	golgi, plasma membrane	14.69	50.94
CDX69127	Canola	plasma membrane	50.49	50.88
CDY24327	Canola	plasma membrane	50.49	50.88
Bra011603.1-P	Field mustard	plasma membrane	50.49	50.82
CDY65624	Canola	plasma membrane	47.77	50.46
AT4G35290.2	Thale cress	plasma membrane	50.05	50.44
AT2G17260.1	Thale cress	plasma membrane	50.71	50.38
CDX95758	Canola	cytosol	22.31	50.37
CDY70557	Canola	extracellular, plasma membrane	28.94	49.91
CDY68928	Canola	extracellular, plasma membrane	28.84	49.72
TraesCS1B01G418500.1	Wheat	plasma membrane	49.95	48.99
TraesCS7B01G355500.1	Wheat	plasma membrane	49.84	48.98
CDX80728	Canola	cytosol	12.73	48.35
KRH74102	Soybean	cytosol, nucleus, peroxisome	32.97	46.69
CDX75490	Canola	extracellular, plasma membrane, vacuole	28.62	45.19
CDX75491	Canola	cytosol, plasma membrane, plastid	9.9	44.61
Bra020812.1-P	Field mustard	plasma membrane	42.98	38.95
PGSC0003DMT400038012	Potato	plasma membrane	49.18	36.81
TraesCS6B01G438400.1	Wheat	plasma membrane	29.82	30.41
TraesCS7B01G242400.1	Wheat	plasma membrane	29.71	30.17
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	29.27	30.09
TraesCS7B01G057800.1	Wheat	plasma membrane	28.73	30.0
TraesCS6B01G381400.1	Wheat	plasma membrane	33.08	29.98
TraesCS5B01G217500.1	Wheat	plasma membrane	30.79	29.73
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	31.34	29.45
TraesCS6B01G380800.1	Wheat	plasma membrane	32.64	29.35
TraesCS5B01G257800.1	Wheat	plasma membrane	28.73	29.24
TraesCS5B01G217100.1	Wheat	plasma membrane	29.71	29.17
TraesCS5B01G046400.1	Wheat	plasma membrane	28.4	29.06
TraesCS5B01G217700.1	Wheat	plasma membrane	28.84	29.03
TraesCS5B01G218900.1	Wheat	plasma membrane	29.49	28.65
TraesCS5B01G217800.1	Wheat	plasma membrane	26.33	28.4
TraesCS5B01G218700.1	Wheat	plasma membrane	28.84	28.4
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	30.58	28.36
TraesCS6B01G380900.1	Wheat	plasma membrane	28.73	27.41

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PRINTS:PR01176	PANTHER:PTHR43891
PANTHER:PTHR43891:SF13	InterPro:Peripla_BP_I	SMART:SM00062	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850
SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G477300	EnsemblPlants:TraesCS2B01G477300.4	TIGR:cd06366
TIGR:cd13686	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:674038190..674041911

Molecular Weight (calculated)

101112.0 Da

IEP (calculated)

7.444

GRAVY (calculated)

0.106

Length

919 amino acids

Sequence
(BLAST)

001: MKFTLHFWVL FCCLYALSKN IYARPDTVSV GALFTFNSTI GRAAKIAISA AVNEINNDSS ILPGTNLVVE MQDSNCSGFV GIVQALQFME KDTAAIIGPQ
101: SSVIAHVISH VANELQVPML SFGATDPTLT SLQFPFLVRT TRSDHFQMAA VADLVDYYEW KQVTAIYIDD DYGRNGIASL GDELVKRRGK ISYKAAVRPG
201: AKKSEMASVL VRVALMESRV VILHANPDSG LALLSLARNL GMTSSGYVWI ATDWLSSILD SSPRLDIGLL STMQGFLTLR QHTENTRRKS MLASKWSALV
301: KKDSVDDLFL INSYGFYAYD TVWILAYALD AYFSRGGNIS FSNDTKLHEV GAGGLQLKAM TVFDGGRLLL ERIQQVNFTG ATGPVKFDTD GNLIRPAYDI
401: VNIVGSGLRT VGHWSNYSGL STSLPETLYM KPAKRIRGDQ KLHTVIWPGE TTVRPRGWVF PNNGIELKIG VPNRASYRQF VSVDNNSGTV RGFCIDVFVA
501: AANLLQYPVP FKFVPFGDGS QNPSYPDLIN NILTNEFDAV VGDIAIVTNR TRVVDFTQPY VESGLVVLTS VKKQSSSGWA FLQPFTIKMW CVTGLFFLVI
601: GTVVWLLEHR INDDFRGPPV KQVITVFWFS FSTLFFAHRE DTRSTLGRFV IIIWLFVVLI IQSSYTASLT SILTVQQLIS PITGIDSLVA SDEPIGFQVG
701: SFAESYLVNE LGVSRHRLKS LGSPDEYKQA LELGPANGGV TAIVDERPYV EIFLLLHPKF AVVGSEFTKS GWGFAFPRDS PLAVDLSTSI LALSENGDLQ
801: RIHDKWLAND AAMSTSQNNE LESDRLQVYS FSGLFLICGV ACLVALAIHA GILFHKYCEQ RRQMSADGSS RSSRSSFRAF LSFADRREMD THIASKDKAG
901: GDHSISARSS SSVSTAASC

Best Arabidopsis Sequence Match ( AT1G42540.2 )
(BLAST)

001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

Arabidopsis Description

GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.