Factsheet for TraesCS5B01G217000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 4
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G225900.1	Wheat	golgi	93.18	96.19
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	54.81	90.91
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	77.4	70.76
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	73.49	66.3
Zm00001d005783_P002	Maize	plasma membrane	70.25	64.41
KXG35672	Sorghum	mitochondrion, plasma membrane	69.35	63.92
Zm00001d020568_P001	Maize	golgi	68.34	63.58
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	66.89	62.95
GSMUA_Achr6P01870_001	Banana	cytosol	47.43	48.4
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	26.96	43.42
VIT_04s0069g00560.t01	Wine grape	plasma membrane	42.95	42.86
VIT_04s0069g00200.t01	Wine grape	cytosol	20.92	42.4
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	38.93	42.03
VIT_04s0069g00540.t01	Wine grape	plasma membrane	33.11	41.87
VIT_04s0069g00670.t01	Wine grape	plasma membrane	42.39	41.24
VIT_04s0069g00170.t01	Wine grape	plasma membrane	42.39	40.93
VIT_04s0069g00720.t01	Wine grape	cytosol	27.18	40.7
KRH50533	Soybean	plasma membrane	35.91	40.02
VIT_04s0069g00380.t01	Wine grape	cytosol	18.34	40.0
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	38.37	39.61
VIT_04s0069g00620.t01	Wine grape	plasma membrane	43.62	39.39
VIT_04s0069g00060.t01	Wine grape	plasma membrane	43.06	39.33
KRH50532	Soybean	plasma membrane	34.23	37.87
TraesCS5B01G217700.1	Wheat	plasma membrane	38.59	37.79
VIT_04s0069g00230.t01	Wine grape	plasma membrane	43.18	37.73
Solyc08g006500.2.1	Tomato	extracellular	40.6	37.38
TraesCS5B01G217800.1	Wheat	plasma membrane	35.35	37.09
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.5	36.93
TraesCS7B01G242400.1	Wheat	plasma membrane	37.36	36.91
Bra023313.1-P	Field mustard	plasma membrane	35.46	36.9
CDX85724	Canola	plasma membrane	35.35	36.79
CDY51113	Canola	plasma membrane	35.23	36.67
TraesCS5B01G257800.1	Wheat	plasma membrane	36.91	36.54
CDY31759	Canola	cytosol, peroxisome, plasma membrane	19.24	36.52
TraesCS5B01G218900.1	Wheat	plasma membrane	38.26	36.15
TraesCS7B01G057800.1	Wheat	plasma membrane	35.46	36.02
TraesCS5B01G218700.1	Wheat	plasma membrane	37.47	35.91
AT2G29100.2	Thale cress	plasma membrane	37.81	35.88
TraesCS5B01G046400.1	Wheat	plasma membrane	36.02	35.86
CDY31756	Canola	cytosol, peroxisome, plastid	34.79	35.83
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.25	35.65
TraesCS6B01G380800.1	Wheat	plasma membrane	40.6	35.52
AT2G29110.2	Thale cress	plasma membrane	37.58	35.44
CDY70035	Canola	cytosol, plasma membrane	31.99	35.35
AT5G11210.5	Thale cress	plasma membrane	36.24	35.29
Bra032072.1-P	Field mustard	plasma membrane	35.35	35.27
AT2G29120.1	Thale cress	plasma membrane	37.47	35.19
Bra040760.1-P	Field mustard	cytosol	33.0	35.04
AT5G27100.1	Thale cress	plasma membrane	35.23	34.96
TraesCS6B01G381400.1	Wheat	plasma membrane	39.6	34.91
TraesCS6B01G438400.1	Wheat	plasma membrane	35.12	34.85
Bra032063.1-P	Field mustard	plasma membrane	35.91	34.78
CDY54213	Canola	plasma membrane	34.45	34.65
CDY50141	Canola	plasma membrane	20.47	34.53
AT4G31710.2	Thale cress	plasma membrane	35.12	34.43
TraesCS5B01G217500.1	Wheat	plasma membrane	36.58	34.35
AT2G24720.1	Thale cress	plasma membrane	35.35	34.35
CDY31755	Canola	cytosol	35.46	34.34
CDX73196	Canola	cytosol, peroxisome, plasma membrane	35.01	34.28
CDY38574	Canola	plasma membrane	37.02	34.23
CDY00544	Canola	plasma membrane	29.75	34.15
AT2G24710.3	Thale cress	plasma membrane	35.01	34.06
Bra040761.1-P	Field mustard	cytosol	35.46	34.05
CDY58212	Canola	cytosol, plasma membrane	31.66	33.93
CDY39533	Canola	plasma membrane	36.69	33.78
CDY45595	Canola	plasma membrane	32.44	33.72
TraesCS5B01G217100.1	Wheat	plasma membrane	35.23	33.65
AT5G11180.2	Thale cress	plasma membrane	36.35	33.61
CDY36173	Canola	plasma membrane	29.98	33.25
CDX72325	Canola	plasma membrane	24.94	33.09
PGSC0003DMT400023744	Potato	cytosol	32.33	33.07
CDY56837	Canola	plasma membrane	32.89	32.03
CDY68132	Canola	plasma membrane	35.79	31.71
Bra015817.1-P	Field mustard	plasma membrane	35.79	31.71
TraesCS6B01G380900.1	Wheat	plasma membrane	33.78	31.36
TraesCS2B01G246200.1	Wheat	plasma membrane	30.98	30.92
TraesCS6B01G065400.1	Wheat	plasma membrane	31.66	30.56
TraesCS6B01G066200.1	Wheat	plasma membrane	30.76	29.86
TraesCS2B01G285400.1	Wheat	plasma membrane	30.76	29.63
TraesCS6B01G065700.1	Wheat	plasma membrane	30.54	29.58
CDY13449	Canola	cytosol	31.66	29.51
TraesCS2B01G477300.4	Wheat	plasma membrane	30.09	29.27
TraesCS6B01G065500.1	Wheat	plasma membrane	30.2	29.16
TraesCS7B01G355500.1	Wheat	plasma membrane	30.43	29.09
TraesCS1B01G418500.1	Wheat	plasma membrane	30.31	28.92
Bra023989.1-P	Field mustard	cytosol	31.77	28.83
CDY63640	Canola	cytosol	16.89	27.81
VIT_04s0069g00330.t01	Wine grape	plastid	42.95	21.82

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF6
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G217000	EnsemblPlants:TraesCS5B01G217000.1	TIGR:cd06366	TIGR:cd13686	SEG:seg

Description

No Description!

Coordinates

chr5B:-:391146412..391155287

Molecular Weight (calculated)

98672.4 Da

IEP (calculated)

8.129

GRAVY (calculated)

-0.031

Length

894 amino acids

Sequence
(BLAST)

001: MKATTRTLLR VLRRRHGLLL ALVLLVGAAS GVAAQGGDAV PRRRPRTVDV GVILDRTTWV GNMSWTCMEL AMEDFYADED QAGYSARLRL HLRDPGPNAV
101: DAAAAGVDLL KNVGVQAIVG PQTSTQAKFL ARLGNKSLVP IISFSADCPS RAGLTPYFIR TAWNDSSQAE AIASLVKKHN WREVVPVFED DDTNTKFIPD
201: LVDALKQVDT RVSYRCKIHP SATVDAMKAA ISSLRHNWTS VFIVRMSHAL ALKFFQLAKE EGMMGQGFVW ITAYGLTDIF DVVGSPALDV MQGVLGVKPH
301: VQDTVKLQNF TQRWHSKYRL ENPGTSLSEP TVSGLYAYDT IWALASAAEN ATYVNLDFGP SVTKNGSTDF DRIDTSKAAQ KLRGALLKVN FSGMSGIFRI
401: EDTQLVSSNY TIINIVGQDR REVGFWTPNF GISGSPNMKS DINTIIWPGD PETVPRGWLL PRNKRLQIGV PANPGFGQLV RYENGPEGKK GFCIKVFDEV
501: VDNLPYQVLY DYHGFDDGQG NSNGTYDELI YKLYLKEFDA VVGDVTILAN RSLYVDFTLP YTESGVRMLV PVLDRRQKTA WTFLKPLTAD LWLGTGAFVV
601: FTGFVVWCIE NHEDFKGTPA NQIGSVFYFS FSTLVFAHRE KIKNNLSRIV VVVWLFVVLI VQQSYTASLS SILTVEQLQP TVTNLDEVIR KGSYVGYLND
701: SFLPGLLKSL KIDESKMIAL NSAEEYNNAL STGKVAVIVD EIPYLKLFLS KYCHNYTMTG PIYRFDGFGY AFPLGSPLTA DITRGILQLA SSGRMAELQK
801: ELYGDKSCPD KDDSQTSSSL TLHSFQGLFS ISGACSILAL ILHALITNKG VFSRWLAAIC SKLLHKSNTL QIMTRPVANV GNTGSPPEGE GSRV

Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)

001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.