Factsheet for TraesCS6B01G380900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G347400.1	Wheat	plastid	82.35	76.25
TraesCS6B01G380800.1	Wheat	plasma membrane	78.61	74.07
TraesCS6B01G381400.1	Wheat	plasma membrane	76.43	72.58
HORVU6Hr1G083570.16	Barley	plasma membrane	76.64	72.5
Os02t0787600-01	Rice	golgi	59.71	58.2
KXG31244	Sorghum	mitochondrion	58.26	55.43
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	57.74	54.67
Zm00001d018332_P001	Maize	plastid	55.66	53.82
TraesCS7B01G057800.1	Wheat	plasma membrane	40.91	44.77
GSMUA_Achr4P02110_001	Banana	cytosol	36.76	43.81
TraesCS6B01G438400.1	Wheat	plasma membrane	39.67	42.4
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	28.45	41.45
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	32.61	37.92
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.16	37.61
VIT_04s0069g00560.t01	Wine grape	plasma membrane	34.58	37.17
CDY31759	Canola	cytosol, peroxisome, plasma membrane	18.17	37.16
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	32.92	36.61
VIT_04s0069g00670.t01	Wine grape	plasma membrane	34.37	36.02
VIT_04s0069g00170.t01	Wine grape	plasma membrane	34.37	35.75
VIT_04s0069g00620.t01	Wine grape	plasma membrane	36.55	35.56
Solyc08g006500.2.1	Tomato	extracellular	35.1	34.81
CDY50141	Canola	plasma membrane	19.11	34.72
VIT_04s0069g00060.t01	Wine grape	plasma membrane	34.58	34.01
TraesCS5B01G217500.1	Wheat	plasma membrane	33.44	33.82
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	31.36	33.78
TraesCS7B01G242400.1	Wheat	plasma membrane	31.67	33.7
CDY70035	Canola	cytosol, plasma membrane	27.93	33.25
CDX72325	Canola	plasma membrane	23.16	33.09
KRH50533	Soybean	plasma membrane	27.41	32.92
TraesCS5B01G217100.1	Wheat	plasma membrane	31.88	32.8
AT2G29120.1	Thale cress	plasma membrane	32.4	32.77
AT2G29110.2	Thale cress	plasma membrane	32.19	32.7
AT2G29100.2	Thale cress	plasma membrane	31.98	32.7
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	33.54	32.59
TraesCS5B01G217700.1	Wheat	plasma membrane	30.84	32.53
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	31.46	32.44
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	32.92	32.41
KRH50532	Soybean	plasma membrane	27.0	32.18
TraesCS5B01G218900.1	Wheat	plasma membrane	31.57	32.14
CDY58212	Canola	cytosol, plasma membrane	27.83	32.13
CDY31756	Canola	cytosol, peroxisome, plastid	28.87	32.03
Bra040760.1-P	Field mustard	cytosol	27.93	31.95
TraesCS5B01G218700.1	Wheat	plasma membrane	30.95	31.94
VIT_04s0069g00540.t01	Wine grape	plasma membrane	23.36	31.82
CDY31755	Canola	cytosol	30.43	31.74
VIT_04s0069g00230.t01	Wine grape	plasma membrane	33.64	31.67
AT5G11210.5	Thale cress	plasma membrane	30.11	31.59
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	18.17	31.53
Bra032072.1-P	Field mustard	plasma membrane	29.28	31.47
Bra040761.1-P	Field mustard	cytosol	30.43	31.47
CDX73196	Canola	cytosol, peroxisome, plasma membrane	29.8	31.43
PGSC0003DMT400023744	Potato	cytosol	28.35	31.24
AT5G27100.1	Thale cress	plasma membrane	29.18	31.19
CDY51113	Canola	plasma membrane	27.62	30.97
CDY38574	Canola	plasma membrane	31.05	30.92
TraesCS5B01G217800.1	Wheat	plasma membrane	27.31	30.87
CDY39533	Canola	plasma membrane	31.05	30.79
Bra023313.1-P	Field mustard	plasma membrane	27.41	30.73
TraesCS5B01G046400.1	Wheat	plasma membrane	28.56	30.62
CDX85724	Canola	plasma membrane	27.31	30.62
VIT_04s0069g00200.t01	Wine grape	cytosol	14.02	30.61
AT4G31710.2	Thale cress	plasma membrane	28.97	30.59
TraesCS5B01G257800.1	Wheat	plasma membrane	28.56	30.45
AT5G11180.2	Thale cress	plasma membrane	30.22	30.09
CDY00544	Canola	plasma membrane	24.3	30.04
AT2G24710.3	Thale cress	plasma membrane	28.66	30.03
AT2G24720.1	Thale cress	plasma membrane	28.66	30.0
VIT_04s0069g00720.t01	Wine grape	cytosol	18.59	29.98
TraesCS2B01G285400.1	Wheat	plasma membrane	28.66	29.74
CDY68132	Canola	plasma membrane	30.74	29.34
Bra015817.1-P	Field mustard	plasma membrane	30.74	29.34
Bra032063.1-P	Field mustard	plasma membrane	28.04	29.25
VIT_04s0069g00380.t01	Wine grape	cytosol	12.36	29.02
CDY54213	Canola	plasma membrane	26.79	29.02
CDY45595	Canola	plasma membrane	25.75	28.84
TraesCS2B01G477300.4	Wheat	plasma membrane	27.41	28.73
TraesCS7B01G355500.1	Wheat	plasma membrane	27.73	28.56
CDY56837	Canola	plasma membrane	26.9	28.21
CDY36173	Canola	plasma membrane	23.57	28.16
TraesCS2B01G246200.1	Wheat	plasma membrane	26.06	28.01
TraesCS1B01G418500.1	Wheat	plasma membrane	27.1	27.85
TraesCS6B01G065400.1	Wheat	plasma membrane	26.58	27.65
TraesCS6B01G065500.1	Wheat	plasma membrane	26.58	27.65
TraesCS6B01G066200.1	Wheat	plasma membrane	26.27	27.47
TraesCS6B01G065700.1	Wheat	plasma membrane	26.27	27.41
CDY13449	Canola	cytosol	26.06	26.17
Bra023989.1-P	Field mustard	cytosol	26.17	25.58
CDY63640	Canola	cytosol	12.15	21.55
VIT_04s0069g00330.t01	Wine grape	plastid	34.16	18.69

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF9
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G380900	EnsemblPlants:TraesCS6B01G380900.1	TIGR:cd13686	SEG:seg	:

Description

No Description!

Coordinates

chr6B:+:655887953..655892270

Molecular Weight (calculated)

105450.0 Da

IEP (calculated)

9.849

GRAVY (calculated)

-0.208

Length

963 amino acids

Sequence
(BLAST)

001: MVRAPSPSSL LYAPLLLVAA LVGQYPAGSL RVATAQTVAA PVPVRVGVIM DWATKASSAV SLRRRTGIEM AVEDYYAAHP GSATRVELRF GDSKGEVVGA
101: ASAGAGHHRA QDVSGGGVRR PSRQPRPRPR ALLLCHLPVH HLDADALLRA HGRQRLLPGH PRRCRPRKLR VARRDRPARG LPVRRRHPPG ARRRAPELDG
201: AAIVDRVAVP SGADEDALDA LLYRLRAMPM RVFVVHATHD LAVRLFRRAS KAGMMSGGYA WVATDGVGSF LDRLDPEDLD FMQGVVSLRP HVEYTKQVKN
301: FSARFRARFR RENPASDDDL LNDATVIRLW SYDTAWAIAA GRGSRDLDRL GVSATGAALL RAVLNTTFDG MAGRFKLVDG QLQVAAYEVL NIIGNGAMTV
401: GYWTPESGIS RDLKVGSGKA ARQLKPILWP GEMLSPPRGW TASQNERVLN VAVPVKHGFK QFVDVFSENS TTPKITGYCI DVFDAVMKNL PYPVSYRYVP
501: YNASSESYEM LVDQVSEGKA DMAVGDVTIR ASRMDKVDFT VPFTESGWAM VVATRPDTSA SMWIFLKPLT TSLWLTSLAF FCFTGFVVWV FVGTASTRSS
601: GARRRSKEKP ESNLSRFVVI IWVFVVLILT SSYTASLTSM LTVQQLRPTV TDVKELQRRG QYIGYQEGTF IEPMLKKMGF DERRMKKYST VEQYAVALSK
701: GSANGGVDAV FDEIPYLKMF LSQHCDGYMQ VGAIYKTDGF GFVFPRGSPM TGDVSREILK LAEGDKMAHI EKAWFGEPGT CQNALDGIGG GSSNLSFGGL
801: FLITGVVSSL MLLLYLAIFA YREREELREA EAKAEAEAGS GSVSVRRLRA WLQHFDRKDL KSPTFKTWND GSPRNGNDSA GRTPRWNGGA GDASMPPRDG
901: GEEHQHAMEG TSPLSVYISS EMNAGSSPEG TAASEISESF EQRIEGAATA VEVTMPTASQ LQQ

Best Arabidopsis Sequence Match ( AT2G29110.1 )
(BLAST)

001: MNPKKNNNTF LSYFVCLFLL LEVGLGQNQI SEIKVGVVLD LNTTFSKICL TSINLALSDF YKDHPNYRTR LALHVRDSMK DTVQASAAAL DLIQNEQVSA
101: IIGPIDSMQA KFMIKLANKT QVPTISFSAT SPLLTSIKSD YFVRGTIDDS YQVKAIAAIF ESFGWRSVVA IYVDNELGEG IMPYLFDALQ DVQVDRSVIP
201: SEANDDQILK ELYKLMTRQT RVFVVHMASR LASRIFEKAT EIGMMEEGYV WLMTNGMTHM MRHIHHGRSL NTIDGVLGVR SHVPKSKGLE DFRLRWKRNF
301: KKENPWLRDD LSIFGLWAYD STTALAMAVE KTNISSFPYN NASGSSNNMT DLGTLHVSRY GPSLLEALSE IRFNGLAGRF NLIDRQLESP KFEIINFVGN
401: EERIVGFWTP SNGLVNVNSN KTTSFTGERF GPLIWPGKST IVPKGWEIPT NGKKIKVGVP VKKGFFNFVE VITDPITNIT TPKGYAIDIF EAALKKLPYS
501: VIPQYYRFES PDDDYDDLVY KVDNGTLDAV VGDVTITAYR SLYADFTLPY TESGVSMMVP VRDNENKNTW VFLKPWGLDL WVTTACFFVL IGFVVWLFEH
601: RVNTDFRGPP HHQIGTSFWF SFSTMVFAHR EKVVSNLARF VVVVWCFVVL VLTQSYTANL TSFLTVQRFQ PAAINVKDLI KNGDYVGYQH GAFVKDFLIK
701: EGFNVSKLKP FGSSEECHAL LSNGSISAAF DEVAYLRAIL SQYCSKYAIV EPTFKTAGFG FAFPRNSPLT GDVSKAILNV TQGDEMQHIE NKWFMKQNDC
801: PDPKTALSSN RLSLRSFWGL FLIAGIASFL ALLIFVFLFL YENRHTLCDD SEDSIWRKLT SLFRNFDEKD IKSHTFKSSA VHHVSSPMTQ YIPSPSTLQI
901: APRPHSPSQD RAFELRRVSF TPNEERLTTQ TIHFEDEESD IECVVEQ

Arabidopsis Description

ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.