Factsheet for Bra023989.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13449	Canola	cytosol	91.57	94.06
CDY63640	Canola	cytosol	49.24	89.32
AT5G27100.1	Thale cress	plasma membrane	67.31	73.58
Bra032072.1-P	Field mustard	plasma membrane	51.98	57.14
Bra032063.1-P	Field mustard	plasma membrane	51.68	55.15
VIT_04s0069g00200.t01	Wine grape	cytosol	23.25	51.93
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	28.73	50.99
VIT_04s0069g00380.t01	Wine grape	cytosol	21.22	50.98
VIT_04s0069g00560.t01	Wine grape	plasma membrane	41.42	45.54
VIT_04s0069g00720.t01	Wine grape	cytosol	26.9	44.39
VIT_04s0069g00170.t01	Wine grape	plasma membrane	41.32	43.95
VIT_04s0069g00670.t01	Wine grape	plasma membrane	40.71	43.63
VIT_04s0069g00540.t01	Wine grape	plasma membrane	30.36	42.29
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	35.33	42.03
PGSC0003DMT400067658	Potato	plastid	36.04	41.62
VIT_04s0069g00620.t01	Wine grape	plasma membrane	41.83	41.62
Bra023313.1-P	Field mustard	plasma membrane	35.84	41.09
Solyc08g006500.2.1	Tomato	extracellular	40.51	41.09
VIT_04s0069g00060.t01	Wine grape	plasma membrane	40.71	40.96
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	35.63	40.53
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	37.66	39.72
VIT_04s0069g00230.t01	Wine grape	plasma membrane	40.91	39.39
TraesCS5A01G218900.1	Wheat	plasma membrane	30.25	38.4
Bra040760.1-P	Field mustard	cytosol	32.39	37.89
Bra040761.1-P	Field mustard	cytosol	35.33	37.38
Os09t0428600-00	Rice	plasma membrane	20.41	37.15
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	24.87	37.07
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	18.78	37.0
HORVU5Hr1G072170.1	Barley	plasma membrane	29.54	36.47
Bra015817.1-P	Field mustard	plasma membrane	37.26	36.37
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	23.35	36.22
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.73	36.09
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	26.6	35.94
TraesCS5B01G217800.1	Wheat	plasma membrane	30.96	35.8
TraesCS7B01G242400.1	Wheat	plasma membrane	32.79	35.69
GSMUA_Achr4P02110_001	Banana	cytosol	29.24	35.64
TraesCS5D01G228000.1	Wheat	plasma membrane	28.63	35.61
GSMUA_Achr6P01870_001	Banana	cytosol	31.47	35.39
HORVU5Hr1G063530.5	Barley	plasma membrane	32.89	35.33
Os09t0428300-00	Rice	plasma membrane	31.27	35.32
GSMUA_Achr3P04970_001	Banana	plasma membrane	34.31	35.32
GSMUA_AchrUn_...	Banana	golgi	30.25	34.98
TraesCS7A01G341200.1	Wheat	plasma membrane	31.78	34.97
TraesCS5A01G218700.1	Wheat	plasma membrane	32.28	34.68
KRH50532	Soybean	plasma membrane	28.43	34.65
OQU89536	Sorghum	cytosol	31.78	34.62
TraesCS5A01G219800.1	Wheat	plasma membrane	32.49	34.59
TraesCS5D01G226500.2	Wheat	cytosol	30.76	34.59
OQU84757	Sorghum	plasma membrane	31.88	34.47
TraesCS5D01G226700.3	Wheat	plasma membrane	32.08	34.46
TraesCS5D01G227800.1	Wheat	plasma membrane	32.28	34.42
Os09t0429000-00	Rice	plasma membrane	32.28	34.08
KRH50533	Soybean	plasma membrane	27.61	33.92
GSMUA_Achr9P13570_001	Banana	plasma membrane	31.37	33.88
TraesCS5A01G218600.1	Wheat	plasma membrane	31.27	33.73
HORVU5Hr1G063500.1	Barley	plasma membrane	31.68	33.58
TraesCS5B01G217700.1	Wheat	plasma membrane	31.07	33.52
Os09t0429400-00	Rice	golgi	31.78	33.51
HORVU5Hr1G063540.6	Barley	plasma membrane	30.96	33.44
OQU89527	Sorghum	plasma membrane	31.57	33.44
TraesCS5B01G218700.1	Wheat	plasma membrane	31.68	33.44
EER98937	Sorghum	plasma membrane	32.08	33.44
TraesCS5D01G226800.1	Wheat	plasma membrane	32.28	33.4
TraesCS5D01G266800.1	Wheat	plasma membrane	30.25	33.33
TraesCS5D01G226600.1	Wheat	plasma membrane	31.37	33.26
HORVU5Hr1G010420.17	Barley	plasma membrane	30.25	33.11
Os09t0429500-00	Rice	plasma membrane	31.78	33.09
TraesCS5B01G218900.1	Wheat	plasma membrane	31.78	33.09
TraesCS5A01G218400.1	Wheat	plasma membrane	31.07	33.05
TraesCS5B01G257800.1	Wheat	plasma membrane	30.25	33.0
EER98936	Sorghum	plasma membrane	31.68	32.98
TraesCS5B01G046400.1	Wheat	plasma membrane	29.95	32.85
Os09t0429200-00	Rice	plasma membrane	31.57	32.81
Os06t0190800-01	Rice	cytosol, plasma membrane	27.31	32.8
TraesCS5D01G225900.1	Wheat	golgi	28.73	32.68
TraesCS5A01G042800.1	Wheat	plasma membrane	29.64	32.52
KXG19504	Sorghum	golgi, plasma membrane, vacuole	28.73	32.49
TraesCS5D01G051300.1	Wheat	golgi	29.34	32.15
KXG35670	Sorghum	plasma membrane	31.88	32.14
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	28.83	31.77
TraesCS5A01G259100.1	Wheat	cytosol, nucleus, plasma membrane	23.35	31.55
HORVU7Hr1G031400.1	Barley	plasma membrane	23.25	31.54
Zm00001d020563_P001	Maize	plasma membrane	30.46	31.51
Os02t0787600-01	Rice	golgi	31.57	31.48
HORVU7Hr1G081410.3	Barley	plasma membrane	18.17	31.29
OQU89534	Sorghum	plasma membrane	28.83	31.17
TraesCS7B01G057800.1	Wheat	plasma membrane	27.61	30.91
TraesCS6A01G347900.1	Wheat	plasma membrane	31.57	30.85
TraesCS6D01G330900.1	Wheat	plasma membrane	31.57	30.85
TraesCS6B01G381400.1	Wheat	plasma membrane	31.47	30.57
TraesCS5B01G217500.1	Wheat	plasma membrane	29.54	30.57
TraesCS5D01G226400.1	Wheat	plasma membrane	29.34	30.45
TraesCS5A01G218300.1	Wheat	plasma membrane	29.44	30.4
TraesCS5D01G226300.1	Wheat	plasma membrane	29.64	30.39
HORVU6Hr1G083680.5	Barley	plasma membrane	31.07	30.21
TraesCS6B01G438400.1	Wheat	plasma membrane	27.61	30.19
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	29.95	30.16
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	16.45	30.06
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	28.93	30.0
TraesCS5A01G218200.1	Wheat	plasma membrane	29.44	29.93
TraesCS2D01G025600.1	Wheat	plasma membrane	19.7	29.75
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	29.85	29.67
TraesCS6B01G380800.1	Wheat	plasma membrane	30.76	29.65
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	29.54	29.63
TraesCS3A01G023600.2	Wheat	plasma membrane	27.11	29.6
TraesCS6D01G330500.1	Wheat	plasma membrane	30.56	29.6
TraesCS5A01G218000.1	Wheat	plasma membrane	29.44	29.59
HORVU6Hr1G083570.16	Barley	plasma membrane	30.56	29.57
HORVU5Hr1G063440.1	Barley	plasma membrane	29.44	29.53
TraesCS2D01G462300.1	Wheat	plasma membrane	29.14	29.47
Zm00001d018332_P001	Maize	plastid	29.75	29.42
TraesCS5D01G226000.1	Wheat	plasma membrane	27.61	29.15
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	28.83	29.07
KXG31244	Sorghum	mitochondrion	29.85	29.05
Os09t0431100-01	Rice	plasma membrane	28.12	29.01
KXG35672	Sorghum	mitochondrion, plasma membrane	28.43	28.87
TraesCS6A01G347400.1	Wheat	plastid	30.46	28.85
Zm00001d020568_P001	Maize	golgi	28.12	28.82
TraesCS7A01G154100.1	Wheat	plasma membrane	27.31	28.74
HORVU5Hr1G063430.8	Barley	plasma membrane	27.21	28.54
TraesCS5B01G217100.1	Wheat	plasma membrane	27.01	28.42
Zm00001d005783_P002	Maize	plasma membrane	28.12	28.41
Zm00001d005782_P001	Maize	plasma membrane	28.22	28.37
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	27.72	28.26
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	29.14	28.22
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	29.04	28.18
KXG35671	Sorghum	plasma membrane	27.82	27.96
Bra034931.1-P	Field mustard	plasma membrane	25.89	27.45
Zm00001d018329_P001	Maize	plasma membrane	27.61	27.2
Bra036795.1-P	Field mustard	plasma membrane	24.47	27.05
Bra005591.1-P	Field mustard	plasma membrane	24.77	26.46
TraesCS6B01G380900.1	Wheat	plasma membrane	25.58	26.17
Bra011603.1-P	Field mustard	plasma membrane	24.16	26.07
Bra015398.1-P	Field mustard	plasma membrane	24.97	25.87
Bra032480.1-P	Field mustard	plasma membrane	25.08	25.7
Bra005589.1-P	Field mustard	plasma membrane	23.65	24.66
HORVU5Hr1G063490.1	Barley	golgi, vacuole	10.56	24.47
VIT_04s0069g00330.t01	Wine grape	plastid	41.52	23.24
Bra020812.1-P	Field mustard	plasma membrane	21.83	21.2
Bra022887.1-P	Field mustard	plasma membrane	25.69	13.62
Os09t0428750-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	InterPro:B3_DNA-bd
EnsemblPlantsGene:Bra023989	EnsemblPlants:Bra023989.1	EnsemblPlants:Bra023989.1-P	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023
InterPro:IPR003340	InterPro:IPR015300	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	UniProt:M4E5D5	PFAM:PF00060
PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF3	InterPro:Peripla_BP_I
SMART:SM00079	SUPFAM:SSF101936	SUPFAM:SSF53822	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI0002540F7B	SEG:seg	:	:	:	:

Description

AT4G31710 (E=5e-260) ATGLR2.4, GLR2.4 | ATGLR2.4; intracellular ligand-gated ion channel

Coordinates

chrA03:-:28396850..28401973

Molecular Weight (calculated)

111006.0 Da

IEP (calculated)

8.088

GRAVY (calculated)

-0.037

Length

985 amino acids

Sequence
(BLAST)

001: MNINGIKKQN EIILMDKHGV KCVTKLVKDG SKYGKRGLGK GCKDFCEAND VLKIGQPFMS ELVWEDSVPV LTILRKQVHS IRFDTLNNNI IYDFSNHLCN
101: KRALPYRPPR CFLSLQVLTM TREHYLALNL LFLVIVLLMQ VGEGQQNRAS DVKVGIVDDV GMAYSNMTLF CINTSLSDFY SSHPETWTRL VTTVVDSKKD
201: VVIAAASALD LITNNEVKAI LGPWNSMQAQ FMIEIGQKSQ VPIVSYSATS PFLASIRSQY FFRATYDDSS QVHAVKAIIK LFGWREVVPV YVDNTFGEGI
301: MPHLTDALQE INVRIPYRTV ISPNATGDEI SVELLRMMTR PTRVFVVHTE DLLASRFFAK AKEIGLMKQG YVWILTNGIT DGLSLMKEAE TDAMQGVLGV
401: KTYVPRSDKL EAFKSKWKNR FPLSDLSVYG LWAYDATTAL AMAIEEAGAS NLIFAKTDDA MRNMSGLQGL GVSQYGPKLL QTLSKVRFKG LSGDFRFINR
501: ELQPSVLEIV NVNGHGGRTI GYWTKEHGLL KYVDQRQATT TTFTTWKDRL RPIIWPGDTT FVPKGWEIPT NGKRLKIGVP TNNHFPQFVK GTKDPITNST
601: IFSGFCIDYF EAVIQAMPYD VSYDFFPVED MDYETMVHQV YLGKYDAVVG DTTISANRSM YVEFSLPYTP LLSFFIIAVV VWVLEHRVNP DFDGPGRYHY
701: TLVLFLHHGE RVLSFWARLV VIIWYFLVLL LTQSYTASLA SLLTSQQLYP TVTNINSLLA KGERVGNQRS PFILGRLRES GFSDANLVTY GSPEQCHELL
801: DTEPAKGGVS AVFMELPYVR LFLGQHCNKY KMVQTPFKVD GFGLVFPIGS LLVADVSRAI LKVEESNKAN QLESAWFKKI DESCPDPLTS PDPNPSESFR
901: KLGIDSFWVL FVAAAIVCVT ALGKCMFHFL KENPDQRNLQ GLWESPPERH AVIDLVAASH RRQDPCKHRV CFMLELGLHS RSAMY

Best Arabidopsis Sequence Match ( AT5G27100.1 )
(BLAST)

001: MKRENNLVLS LLFFVIVFLM QVGEAQNRIT NVNVGIVNDI GTAYSNMTLL CINMSLSDFY SSHPETQTRL VTTVVDSKND VVTAAAAALD LITNKEVKAI
101: LGPWTSMQAQ FMIEMGQKSQ VPIVTYSATS PSLASIRSQY FFRATYDDSS QVHAIKEIIK LFGWREVAPV YVDDTFGEGI MPRLTDVLQE INVRIPYRTV
201: ISPNATDDEI SVELLRMMTL PTRVFVVHLV ELLASRFFAK ATEIGLMKQG YVWILTNTIT DVLSIMNETE IETMQGVLGV KTYVPRSKEL ENFRSRWTKR
301: FPISDLNVYG LWAYDATTAL ALAIEEAGTS NLTFVKMDAK RNVSELQGLG VSQYGPKLLQ TLSRVRFQGL AGDFQFINGE LQPSVFEIVN VNGQGGRTIG
401: FWMKEYGLFK NVDQKPASKT TFSSWQDRLR PIIWPGDTTS VPKGWEIPTN GKRLQIGVPV NNTFQQFVKA TRDPITNSTI FSGFSIDYFE AVIQAIPYDI
501: SYDFIPFQDG GYDALVYQVY LGKYDAVVAD TTISSNRSMY VDFSLPYTPS GVGLVVPVKD SVRRSSTIFL MPLTLALWLI SLLSFFIIGL VVWVLEHRVN
601: PDFDGPGQYQ LSTIFWFSFS IMVFAPRERV LSFWARVVVI IWYFLVLVLT QSYTASLASL LTTQHLHPTV TNINSLLAKG ESVGYQSSFI LGRLRDSGFS
701: EASLVSYGSP EHCDALLSKG QAEGGVSAVL MEVPYVRIFL GQYCNKYKMV QTPFKVDGLG FVFPIGSPLV ADISRAILKV EESNKANQLE NAWFKPIDES
801: CPDPLTNPDP NPSVSFRQLG FDSFWVLFLV AAIVCTMALL KFVYQFLKEN PNQRNLRVLW EKFNEPDQKS YIKDVTKCQC SSGQGMPKNG QEGANAVNNG
901: N

Arabidopsis Description

GLR2.1Glutamate receptor 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O04660]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.