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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005782_P001 Maize plasma membrane 89.39 89.39
TraesCS5D01G226400.1 Wheat plasma membrane 68.37 70.6
TraesCS5B01G217500.1 Wheat plasma membrane 68.37 70.38
TraesCS5A01G218300.1 Wheat plasma membrane 67.86 69.71
Os09t0431100-01 Rice plasma membrane 67.55 69.32
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 68.78 66.4
HORVU5Hr1G063490.1 Barley golgi, vacuole 28.78 66.35
TraesCS5D01G226000.1 Wheat plasma membrane 62.45 65.59
HORVU5Hr1G063430.8 Barley plasma membrane 61.53 64.22
TraesCS5B01G217100.1 Wheat plasma membrane 61.22 64.1
GSMUA_Achr6P01860_001 Banana cytosol, peroxisome, plasma membrane 41.84 42.44
VIT_04s0069g00560.t01 Wine grape plasma membrane 37.04 40.51
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 33.98 40.22
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 24.08 39.8
VIT_04s0069g00670.t01 Wine grape plasma membrane 37.24 39.72
VIT_04s0069g00540.t01 Wine grape plasma membrane 28.47 39.46
VIT_04s0069g00200.t01 Wine grape cytosol 17.76 39.46
VIT_04s0069g00170.t01 Wine grape plasma membrane 37.14 39.31
CDY31759 Canola cytosol, peroxisome, plasma membrane 18.88 39.28
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 34.69 39.26
KXG19504 Sorghum golgi, plasma membrane, vacuole 34.69 39.04
KXG31244 Sorghum mitochondrion 40.2 38.93
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 21.63 38.2
VIT_04s0069g00060.t01 Wine grape plasma membrane 38.06 38.1
VIT_04s0069g00620.t01 Wine grape plasma membrane 38.47 38.08
CDY70035 Canola cytosol, plasma membrane 31.43 38.07
AT2G29110.2 Thale cress plasma membrane 36.53 37.76
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 35.71 37.47
VIT_04s0069g00720.t01 Wine grape cytosol 22.65 37.19
CDY50141 Canola plasma membrane 20.1 37.17
OQU89536 Sorghum cytosol 34.29 37.17
AT2G29100.2 Thale cress plasma membrane 35.71 37.16
Bra040760.1-P Field mustard cytosol 31.73 36.94
CDY31756 Canola cytosol, peroxisome, plastid 32.65 36.87
VIT_04s0069g00380.t01 Wine grape cytosol 15.41 36.83
KRH50532 Soybean plasma membrane 30.31 36.76
Solyc08g006500.2.1 Tomato extracellular 36.22 36.56
KXG35672 Sorghum mitochondrion, plasma membrane 36.12 36.49
OQU84757 Sorghum plasma membrane 33.57 36.11
CDY58212 Canola cytosol, plasma membrane 30.71 36.09
Bra023313.1-P Field mustard plasma membrane 31.63 36.09
CDY51113 Canola plasma membrane 31.53 35.97
EER98937 Sorghum plasma membrane 34.59 35.87
CDY31755 Canola cytosol 33.78 35.86
CDX85724 Canola plasma membrane 31.43 35.86
CDY38574 Canola plasma membrane 35.31 35.78
VIT_04s0069g00230.t01 Wine grape plasma membrane 37.35 35.78
Bra040761.1-P Field mustard cytosol 33.88 35.66
Bra032072.1-P Field mustard plasma membrane 32.55 35.6
CDY39533 Canola plasma membrane 35.1 35.43
KRH50533 Soybean plasma membrane 28.98 35.41
PGSC0003DMT400023744 Potato cytosol 31.43 35.24
AT2G24720.1 Thale cress plasma membrane 33.06 35.22
EER98936 Sorghum plasma membrane 33.98 35.2
AT2G29120.1 Thale cress plasma membrane 34.18 35.19
OQU89534 Sorghum plasma membrane 32.55 35.02
CDY00544 Canola plasma membrane 27.76 34.92
AT5G27100.1 Thale cress plasma membrane 32.04 34.85
CDY54213 Canola plasma membrane 31.33 34.53
CDX73196 Canola cytosol, peroxisome, plasma membrane 32.14 34.5
OQU89527 Sorghum plasma membrane 32.65 34.41
CDX72325 Canola plasma membrane 23.57 34.27
AT5G11210.5 Thale cress plasma membrane 31.94 34.1
Bra032063.1-P Field mustard plasma membrane 32.04 34.02
AT4G31710.2 Thale cress plasma membrane 31.02 33.33
CDY36173 Canola plasma membrane 27.35 33.25
AT2G24710.3 Thale cress plasma membrane 31.02 33.08
AT5G11180.2 Thale cress plasma membrane 32.55 32.99
CDY45595 Canola plasma membrane 28.88 32.91
CDY68132 Canola plasma membrane 33.88 32.9
Bra015817.1-P Field mustard plasma membrane 33.88 32.9
KXG20640 Sorghum plasma membrane 31.22 32.9
KXG35670 Sorghum plasma membrane 32.76 32.86
CDY56837 Canola plasma membrane 30.61 32.68
EER97313 Sorghum plasma membrane 29.69 31.49
EER95720 Sorghum plastid 31.02 31.24
KXG20638 Sorghum plasma membrane 30.51 31.15
EER90229 Sorghum plasma membrane 29.39 31.1
KXG26996 Sorghum plasma membrane 29.29 30.7
KXG29299 Sorghum plasma membrane 28.78 30.45
EER95721 Sorghum plastid 29.9 29.87
OQU84212 Sorghum mitochondrion 27.04 29.15
CDY13449 Canola cytosol 28.47 29.09
Bra023989.1-P Field mustard cytosol 27.96 27.82
CDY63640 Canola cytosol 14.08 25.41
VIT_04s0069g00330.t01 Wine grape plastid 37.24 20.74
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1B6QCP1InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnEnsemblPlants:KXG35671
ProteinID:KXG35671ProteinID:KXG35671.1PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF2InterPro:Peripla_BP_ISMART:SM00079EnsemblPlantsGene:SORBI_3002G209100SUPFAM:SSF53822
SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI00081AE10ESEG:seg
Description
hypothetical protein
Coordinates
chr2:+:60098419..60106861
Molecular Weight (calculated)
105465.0 Da
IEP (calculated)
6.275
GRAVY (calculated)
0.089
Length
980 amino acids
Sequence
(BLAST)
001: MAGLARHPPF LRVFYLIGLL ASLIPATSPA QPPETVAVGL IIDADSPVGR IASTTIPMAL DDFYAAFPNA SARVRLLQHD SGGDVVAAAS AALQLMTTQG
101: ARAILGPQSS VESAFVADLA TRAEVPVVSF SATSPSVSHS EARFFARAAL SDAAQAEAIA ALATYFGWRR VVPIYQDDDY GAAFVPFLVD ALTAARAEVP
201: YRCALPAGAS RDAVAAAMYR LESEQTRAFV VHARTELAEL VFAAAVEAGM MAEGYAWVIT DGLTGLLGSF HPPQGVIGLA PHVPPTARLR GVRKRWAHRF
301: MRQHQDADPA HAEMGCYALW AYDAAWAVAS AAERLSTGDD LSSSLPGLVG GRSGPTDFSG LGKSMSGEKF LEAITSTTFE GLGGRFELLN GELPVPAFRI
401: VNIMDNAKER GIGFWTHKAG LHRQLGRGRG GIASNSGLAP VIWPADSTVV PIGWVQPTSG RKLQVAMPAG RVDPGYRSIM HLDVDPATNR TVAGGFVIEV
501: FEAAVRLLPY ALPFEYVLVG SMRYDALIER VGKGEFDTAV ADITITAERS KHVDFTLPYM SSGISMVVPV RDQRSKRAAW VFLKPLSYDL WLVSFAFLVF
601: TGFVVWAVEH RSNEEFRGPP SYQIGTLLYF GFSTLVFAHR ENLKSNLSRI VVVVWVFVVL ILQSSYTASL TSMLTVPQLE PAIGDFTSLW RGTDKVGILN
701: NSFMRAAMDK SGFPQSRLEP YQATQSFHEA LLNGTIGAIV DETPYLRLFL TSYCDNFTKI AQSNKTGGFG FAFPKGSPYV ADLSRAILNL TESDEMSLIE
801: RKWFGDADGC AAQGSQFTSE RLSFDSFWGL FLITGATSLL CCALHLLIFV VANRRRIWAS RVPWRNRLRI FLKLLDDRDL SSHTFRTNKD GGGSVADRSA
901: NDAGASPSPA VVRMEAGSPL SVSNHTYDMS DWSFGAPSPA PAAAAGENEI VELAGAGEAE EVAAAPNPDG SGDQSGTAHN
Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)
001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ
Arabidopsis Description
ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.