CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
golgi 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018332_P001	Maize	plastid	84.09	85.44
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	83.4	82.99
Os02t0787600-01	Rice	golgi	66.8	68.42
TraesCS6A01G347900.1	Wheat	plasma membrane	65.71	65.97
TraesCS6B01G381400.1	Wheat	plasma membrane	65.91	65.78
TraesCS6D01G330900.1	Wheat	plasma membrane	65.42	65.67
HORVU6Hr1G083680.5	Barley	plasma membrane	64.92	64.86
TraesCS6B01G380800.1	Wheat	plasma membrane	64.82	64.19
HORVU6Hr1G083570.16	Barley	plasma membrane	64.53	64.15
TraesCS6D01G330500.1	Wheat	plasma membrane	64.43	64.11
TraesCS6A01G347400.1	Wheat	plastid	65.32	63.56
TraesCS2D01G462300.1	Wheat	plasma membrane	61.07	63.45
TraesCS6B01G380900.1	Wheat	plasma membrane	55.43	58.26
KXG19504	Sorghum	golgi, plasma membrane, vacuole	46.54	54.08
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	32.91	50.38
GSMUA_Achr4P02110_001	Banana	cytosol	39.82	49.88
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	35.87	43.84
VIT_04s0069g00560.t01	Wine grape	plasma membrane	38.44	43.42
VIT_04s0069g00170.t01	Wine grape	plasma membrane	39.03	42.66
VIT_04s0069g00670.t01	Wine grape	plasma membrane	38.54	42.44
CDY31759	Canola	cytosol, peroxisome, plasma membrane	19.47	41.83
VIT_04s0069g00200.t01	Wine grape	cytosol	18.18	41.72
VIT_04s0069g00620.t01	Wine grape	plasma membrane	40.71	41.62
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	35.57	41.57
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	22.53	41.08
KRH50533	Soybean	plasma membrane	32.51	41.02
VIT_04s0069g00380.t01	Wine grape	cytosol	16.6	40.98
VIT_04s0069g00540.t01	Wine grape	plasma membrane	28.46	40.74
Solyc08g006500.2.1	Tomato	extracellular	39.03	40.68
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.72	40.47
KXG35671	Sorghum	plasma membrane	38.93	40.2
VIT_04s0069g00060.t01	Wine grape	plasma membrane	38.83	40.14
AT2G29110.2	Thale cress	plasma membrane	37.35	39.87
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	36.76	39.83
AT2G29100.2	Thale cress	plasma membrane	36.96	39.7
OQU89536	Sorghum	cytosol	34.88	39.05
AT2G29120.1	Thale cress	plasma membrane	36.66	38.97
CDY50141	Canola	plasma membrane	20.36	38.87
KRH50532	Soybean	plasma membrane	31.03	38.86
VIT_04s0069g00720.t01	Wine grape	cytosol	22.92	38.86
OQU84757	Sorghum	plasma membrane	34.88	38.75
KXG35672	Sorghum	mitochondrion, plasma membrane	37.06	38.66
CDY31755	Canola	cytosol	35.18	38.57
Bra040761.1-P	Field mustard	cytosol	35.28	38.35
CDY70035	Canola	cytosol, plasma membrane	30.63	38.32
Bra040760.1-P	Field mustard	cytosol	31.82	38.24
CDY38574	Canola	plasma membrane	36.36	38.06
CDY58212	Canola	cytosol, plasma membrane	31.32	38.01
PGSC0003DMT400023744	Potato	cytosol	32.71	37.87
VIT_04s0069g00230.t01	Wine grape	plasma membrane	38.24	37.83
KXG35670	Sorghum	plasma membrane	36.46	37.77
Bra032072.1-P	Field mustard	plasma membrane	33.3	37.61
CDY31756	Canola	cytosol, peroxisome, plastid	32.21	37.56
OQU89527	Sorghum	plasma membrane	34.09	37.1
CDY39533	Canola	plasma membrane	35.57	37.08
EER98937	Sorghum	plasma membrane	34.49	36.93
CDX73196	Canola	cytosol, peroxisome, plasma membrane	33.3	36.91
AT5G27100.1	Thale cress	plasma membrane	32.71	36.74
EER98936	Sorghum	plasma membrane	34.29	36.68
Bra023313.1-P	Field mustard	plasma membrane	30.83	36.32
CDY51113	Canola	plasma membrane	30.53	35.97
CDX85724	Canola	plasma membrane	30.53	35.97
AT5G11210.5	Thale cress	plasma membrane	32.61	35.95
CDY54213	Canola	plasma membrane	31.42	35.77
AT2G24720.1	Thale cress	plasma membrane	32.51	35.76
OQU89534	Sorghum	plasma membrane	32.11	35.68
CDY00544	Canola	plasma membrane	27.27	35.43
AT2G24710.3	Thale cress	plasma membrane	32.11	35.36
CDX72325	Canola	plasma membrane	23.52	35.31
Bra032063.1-P	Field mustard	plasma membrane	31.82	34.89
AT4G31710.2	Thale cress	plasma membrane	31.42	34.87
AT5G11180.2	Thale cress	plasma membrane	33.2	34.75
CDY56837	Canola	plasma membrane	31.32	34.53
Bra015817.1-P	Field mustard	plasma membrane	34.39	34.49
CDY68132	Canola	plasma membrane	34.39	34.49
CDY36173	Canola	plasma membrane	26.98	33.87
CDY45595	Canola	plasma membrane	28.66	33.72
KXG20640	Sorghum	plasma membrane	30.83	33.55
KXG26996	Sorghum	plasma membrane	30.43	32.94
EER97313	Sorghum	plasma membrane	29.55	32.36
KXG29299	Sorghum	plasma membrane	29.55	32.29
KXG20638	Sorghum	plasma membrane	30.43	32.08
EER90229	Sorghum	plasma membrane	29.35	32.07
EER95720	Sorghum	plastid	30.63	31.86
EER95721	Sorghum	plastid	30.53	31.5
OQU84212	Sorghum	mitochondrion	28.16	31.35
CDY13449	Canola	cytosol	29.55	31.18
Bra023989.1-P	Field mustard	cytosol	29.05	29.85
CDY63640	Canola	cytosol	14.72	27.44
VIT_04s0069g00330.t01	Wine grape	plastid	38.44	22.1

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	UniProt:A0A194YSM8	InterPro:ANF_lig-bd_rcpt
GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	EnsemblPlants:KXG31244
ProteinID:KXG31244	ProteinID:KXG31244.1	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PANTHER:PTHR43891	PANTHER:PTHR43891:SF9	InterPro:Peripla_BP_I	SMART:SM00079	EnsemblPlantsGene:SORBI_3004G324000	SUPFAM:SSF53822
SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI0007F2BCDF	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:65860641..65867174

Molecular Weight (calculated)

109887.0 Da

IEP (calculated)

6.523

GRAVY (calculated)

0.006

Length

1012 amino acids

Sequence
(BLAST)

0001: MGRLLRYYSS CSHSAPSLRH RHHLGLVLAA ALLVWCQASL LPVATAQQQQ QQQQPAPAPR VRVGVILNLT SLVGQRRKVG IEMAVEDYYA AFPGSSTRVA
0101: LRFRDSDGDV VGAASAAVDL IKNEQVQAII GPQTSAEAEF VAYLGNRTHV PVLSSSATSP ALSPSQTPFF VRTTVNDSFQ AEPVAAVLAA FGWHAAAVVY
0201: EDSPYGLGIL PALAAALQGV GARVTDRTAV PSDADDDRID LMLYVFKAMP TRVFVVHMNA LLAARFFRRA RMAGMMTEDY AWVATDGVGS VVDALSPDDI
0301: SAMDGVVSLR PFVQVTDRVR NFSARFRARL RREYPSADIY PHDPTVMMLW SYDTAWAIAA AAEAAGVSSP AFQTPPQSAA VTDLDRLGVS ATGATLLKAV
0401: RETTFRGLAG NFALVDGQLQ PPAYEFVNIV GKSSRAVGFW TSEAGITQTL GAHGANKGLK KILWPGDSTS APRGWVVSPN GKKLRVAVPV KHGFKEFVDV
0501: GGESTTTGGH PNITGYCIEV FDAVMSKMPY PVSYEYVPFP SSSESYEYLV SLVPEQKADI VVGDVTITAS RMGKVDFSMP FSDSGWSMVV AVRTETSTSM
0601: WIFLQPLTTS LWLASLAFFC FTGFVVWAIE HRINPEFRGT PWQQFGLIFY FSFSTLVFSH KEKLESNLSR FVVIIWVFVV LILTSSYTAS LTSMLTVQKL
0701: QPAVTDVREL QRTGAHIGYQ EGTFIKQQLQ KLGFDEAKMK SYSTAEKYAD ALSSGQVAAV FDEIPYLKLF LSQYCDGYTM VGPVYKTDGF GFVFPMGSPL
0801: TPDVSRAVLT LAEGEEMALI EKKWFGEPGK CPSQGAGGAT AALGSSNLSF RSFGGLFLIT GVVSGLMLLV YLVTFVYRER GEIRPEPEEE GSGSSSMRRL
0901: RAWLRHFDQK DLKCPTFKTG NDDSIRDGNQ TQRWAEFESV RNGRGGNGPV QAAAEEEAIA IAMSPLSFST STPSERINAG SSPASELGTS FEQRMQEAPH
1001: SVSVDMPGST AP

Best Arabidopsis Sequence Match ( AT2G29120.1 )
(BLAST)

001: MKVMNPRKTN NTFMYYFVLF VCGFVLMEGC LGQNQTTEIK VGVVLDLHTS FSKLCLTSIN ISLSDFYKYH SDYTTRLAIH IRDSMEDVVQ ASSAALDLIK
101: NEQVSAIIGP RTSMQAEFMI RLADKSQVPT ITFSATCPLL TSINSPYFVR ATLDDSSQVK AIAAIVKSFG WRNVVAIYVD NEFGEGILPL LTDALQDVQA
201: FVVNRCLIPQ EANDDQILKE LYKLMTMQTR VFVVHMPPTL GFRFFQKARE IGMMEEGYVW LLTDGVMNLL KSNERGSSLE NMQGVLGVRS HIPKSKKLKN
301: FRLRWEKMFP KKGNDEEMNI FALRAYDSIT ALAMAVEKTN IKSLRYDHPI ASGNNKTNLG TLGVSRYGPS LLKALSNVRF NGLAGEFELI NGQLESSVFD
401: VINIIGSEER IIGLWRPSNG IVNAKSKNTT SVLGERLGPV IWPGKSKDVP KGWQIPTNGK MLRVGIPVKK GFLEFVDAKI DPISNAMTPT GYCIEIFEAV
501: LKKLPYSVIP KYIAFLSPDE NYDEMVYQVY TGAYDAVVGD VTIVANRSLY VDFTLPYTES GVSMMVPLKD NKNTWVFLRP WSLDLWVTTA CFFVFIGFIV
601: WILEHRVNTD FRGPPHHQIG TSFWFAFSTM NFAHREKVVS NLARFVVLVW CFVVLVLIQS YTANLTSFFT VKLLQPTVTN WKDLIKFNKN IGYQRGTFVR
701: ELLKSQGFDE SQLKPFGSAV ECDELFSNGT ITASFDEVAY IKVILSQNSS KYTMVEPSFK TAGFGFVFPK KSPLTDDVSR AILNVTQGEE MQHIENKWFK
801: KPNNCPDLNT SLSSNHLSLS SFWGLFLIAG IASFLALLIF VANFLYEHKH TLFDDSENSF RGKLKFLVRN FDEKDIKSHM FKENAVHNVS SPITQGSSSP
901: LTDQSTPLPR SPEQYRELEL RRVSSISSGE LFTTQSEQVE DEESAIIQCE GE

Arabidopsis Description

GLR2.7Glutamate receptor 2.7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.