Factsheet for VIT_04s0069g00560.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0069g00200.t01	Wine grape	cytosol	45.87	93.2
VIT_04s0069g00670.t01	Wine grape	plasma membrane	95.09	92.71
VIT_04s0069g00380.t01	Wine grape	cytosol	40.74	89.02
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	54.24	87.57
VIT_04s0069g00060.t01	Wine grape	plasma membrane	87.17	79.78
VIT_04s0069g00170.t01	Wine grape	plasma membrane	81.92	79.27
VIT_04s0069g00230.t01	Wine grape	plasma membrane	87.83	76.93
VIT_04s0069g00720.t01	Wine grape	cytosol	47.1	70.69
VIT_04s0069g00540.t01	Wine grape	plasma membrane	55.58	70.44
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	63.84	69.08
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	66.29	68.59
VIT_04s0069g00620.t01	Wine grape	plasma membrane	72.66	65.76
PGSC0003DMT400067658	Potato	plastid	54.13	56.86
Solyc08g006500.2.1	Tomato	extracellular	60.49	55.82
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	38.06	51.59
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	40.51	49.79
Bra032072.1-P	Field mustard	plasma membrane	49.55	49.55
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.34	49.25
AT5G27100.1	Thale cress	plasma membrane	49.44	49.17
CDY00544	Canola	plasma membrane	42.63	49.04
Bra032063.1-P	Field mustard	plasma membrane	50.33	48.86
AT2G29110.2	Thale cress	plasma membrane	51.56	48.73
TraesCS5A01G218900.1	Wheat	plasma membrane	42.08	48.58
GSMUA_Achr3P04970_001	Banana	plasma membrane	51.67	48.38
AT2G29120.1	Thale cress	plasma membrane	51.34	48.32
CDY54213	Canola	plasma membrane	47.88	48.26
CDY31756	Canola	cytosol, peroxisome, plastid	46.65	48.16
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.7	47.89
CDY45595	Canola	plasma membrane	45.87	47.79
CDX72325	Canola	plasma membrane	35.94	47.77
Bra040760.1-P	Field mustard	cytosol	44.87	47.74
AT2G24710.3	Thale cress	plasma membrane	48.88	47.66
CDY36173	Canola	plasma membrane	42.75	47.52
AT2G24720.1	Thale cress	plasma membrane	48.77	47.5
Bra023313.1-P	Field mustard	plasma membrane	45.54	47.5
GSMUA_AchrUn_...	Banana	golgi	45.09	47.42
TraesCS7B01G242400.1	Wheat	plasma membrane	47.88	47.4
AT4G31710.2	Thale cress	plasma membrane	48.1	47.26
CDY31755	Canola	cytosol	48.55	47.13
CDY56837	Canola	plasma membrane	48.21	47.06
CDX85724	Canola	plasma membrane	45.09	47.03
CDY70035	Canola	cytosol, plasma membrane	42.41	46.97
CDY51113	Canola	plasma membrane	44.98	46.91
Bra040761.1-P	Field mustard	cytosol	48.66	46.83
CDY38574	Canola	plasma membrane	50.45	46.74
AT2G29100.2	Thale cress	plasma membrane	49.0	46.6
TraesCS7A01G341200.1	Wheat	plasma membrane	46.54	46.59
CDY39533	Canola	plasma membrane	50.33	46.45
CDY58212	Canola	cytosol, plasma membrane	43.19	46.4
TraesCS5D01G226500.2	Wheat	cytosol	45.2	46.23
AT5G11210.5	Thale cress	plasma membrane	47.32	46.19
GSMUA_Achr4P02110_001	Banana	cytosol	41.52	46.04
HORVU5Hr1G072170.1	Barley	plasma membrane	40.96	45.99
GSMUA_Achr6P01870_001	Banana	cytosol	44.64	45.66
CDY31759	Canola	cytosol, peroxisome, plasma membrane	24.0	45.65
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	25.45	45.6
TraesCS5D01G228000.1	Wheat	plasma membrane	40.29	45.58
CDX73196	Canola	cytosol, peroxisome, plasma membrane	46.43	45.56
HORVU5Hr1G063500.1	Barley	plasma membrane	47.21	45.53
KRH50533	Soybean	plasma membrane	40.74	45.51
Os09t0428300-00	Rice	plasma membrane	44.2	45.41
OQU89536	Sorghum	cytosol	45.76	45.35
TraesCS5B01G217800.1	Wheat	plasma membrane	42.97	45.19
KRH50532	Soybean	plasma membrane	40.74	45.17
GSMUA_Achr9P13570_001	Banana	plasma membrane	45.76	44.96
Os09t0429000-00	Rice	plasma membrane	46.65	44.8
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	26.9	44.71
AT5G11180.2	Thale cress	plasma membrane	47.99	44.47
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	31.47	44.41
HORVU5Hr1G063530.5	Barley	plasma membrane	45.42	44.38
TraesCS5D01G227800.1	Wheat	plasma membrane	45.76	44.37
TraesCS5D01G225900.1	Wheat	golgi	42.86	44.34
TraesCS5A01G219800.1	Wheat	plasma membrane	45.76	44.32
TraesCS5A01G218400.1	Wheat	plasma membrane	45.65	44.17
VIT_11s0052g01020.t01	Wine grape	plasma membrane	44.75	44.07
VIT_04s0069g00330.t01	Wine grape	plastid	86.5	44.03
TraesCS5A01G218700.1	Wheat	plasma membrane	44.98	43.95
TraesCS5A01G218600.1	Wheat	plasma membrane	44.42	43.59
CDY50141	Canola	plasma membrane	25.78	43.58
Os09t0429400-00	Rice	golgi	45.42	43.58
TraesCS5D01G226700.3	Wheat	plasma membrane	44.53	43.51
TraesCS5B01G217700.1	Wheat	plasma membrane	44.08	43.26
Os09t0429500-00	Rice	plasma membrane	45.65	43.23
TraesCS5B01G257800.1	Wheat	plasma membrane	43.53	43.19
HORVU5Hr1G063540.6	Barley	plasma membrane	43.86	43.09
HORVU7Hr1G081410.3	Barley	plasma membrane	27.46	43.01
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	42.86	42.95
CDY13449	Canola	cytosol	45.87	42.86
TraesCS5D01G226600.1	Wheat	plasma membrane	44.31	42.73
TraesCS5D01G266800.1	Wheat	plasma membrane	42.63	42.73
TraesCS5B01G218700.1	Wheat	plasma membrane	44.42	42.66
EER98937	Sorghum	plasma membrane	44.87	42.54
OQU84757	Sorghum	plasma membrane	43.19	42.48
TraesCS5B01G218900.1	Wheat	plasma membrane	44.64	42.28
Bra015817.1-P	Field mustard	plasma membrane	47.32	42.02
CDY68132	Canola	plasma membrane	47.32	42.02
TraesCS5D01G226800.1	Wheat	plasma membrane	44.64	42.02
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	45.76	41.97
Os09t0428600-00	Rice	plasma membrane	25.33	41.96
EER98936	Sorghum	plasma membrane	44.2	41.86
TraesCS5A01G042800.1	Wheat	plasma membrane	41.85	41.76
HORVU5Hr1G010420.17	Barley	plasma membrane	41.85	41.67
TraesCS5B01G046400.1	Wheat	plasma membrane	41.74	41.65
TraesCS5D01G226300.1	Wheat	plasma membrane	44.64	41.62
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	45.42	41.62
Os09t0429200-00	Rice	plasma membrane	43.97	41.56
TraesCS5A01G218200.1	Wheat	plasma membrane	44.87	41.49
Bra023989.1-P	Field mustard	cytosol	45.54	41.42
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	45.2	41.24
Os06t0190800-01	Rice	cytosol, plasma membrane	37.72	41.22
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	43.64	41.16
TraesCS5A01G218000.1	Wheat	plasma membrane	44.87	41.02
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	45.31	40.97
Zm00001d020563_P001	Maize	plasma membrane	43.53	40.97
OQU89527	Sorghum	plasma membrane	42.3	40.75
OQU89534	Sorghum	plasma membrane	41.41	40.72
TraesCS5D01G051300.1	Wheat	golgi	40.85	40.71
KXG19504	Sorghum	golgi, plasma membrane, vacuole	39.51	40.64
HORVU5Hr1G063440.1	Barley	plasma membrane	44.31	40.43
KXG35672	Sorghum	mitochondrion, plasma membrane	43.75	40.41
Zm00001d020568_P001	Maize	golgi	43.3	40.37
HORVU7Hr1G031400.1	Barley	plasma membrane	32.48	40.08
TraesCS6D01G330900.1	Wheat	plasma membrane	45.09	40.08
HORVU6Hr1G083680.5	Barley	plasma membrane	45.09	39.88
Os02t0787600-01	Rice	golgi	43.53	39.47
TraesCS6A01G347900.1	Wheat	plasma membrane	44.31	39.38
TraesCS5A01G259100.1	Wheat	cytosol, nucleus, plasma membrane	32.03	39.37
KXG35670	Sorghum	plasma membrane	42.75	39.2
Zm00001d005783_P002	Maize	plasma membrane	42.63	39.18
TraesCS6B01G381400.1	Wheat	plasma membrane	44.31	39.15
TraesCS6D01G330500.1	Wheat	plasma membrane	44.31	39.04
HORVU6Hr1G083570.16	Barley	plasma membrane	44.31	39.0
TraesCS6B01G380800.1	Wheat	plasma membrane	44.08	38.65
TraesCS7B01G057800.1	Wheat	plasma membrane	37.95	38.64
TraesCS6A01G347400.1	Wheat	plastid	44.75	38.56
TraesCS2D01G462300.1	Wheat	plasma membrane	41.85	38.5
CDY63640	Canola	cytosol	23.33	38.49
Zm00001d018332_P001	Maize	plastid	42.75	38.45
KXG31244	Sorghum	mitochondrion	43.42	38.44
HORVU5Hr1G063490.1	Barley	golgi, vacuole	18.19	38.35
TraesCS2D01G025600.1	Wheat	plasma membrane	27.9	38.34
TraesCS5A01G218300.1	Wheat	plasma membrane	40.74	38.26
TraesCS5D01G226400.1	Wheat	plasma membrane	40.51	38.25
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	41.18	38.2
TraesCS5B01G217500.1	Wheat	plasma membrane	40.4	38.03
TraesCS3A01G023600.2	Wheat	plasma membrane	37.83	37.58
TraesCS6B01G438400.1	Wheat	plasma membrane	37.39	37.18
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	42.19	37.17
Zm00001d005782_P001	Maize	plasma membrane	40.62	37.14
KXG35671	Sorghum	plasma membrane	40.51	37.04
Os09t0431100-01	Rice	plasma membrane	39.29	36.86
TraesCS7A01G154100.1	Wheat	plasma membrane	37.83	36.22
TraesCS5D01G226000.1	Wheat	plasma membrane	37.39	35.91
TraesCS5B01G217100.1	Wheat	plasma membrane	37.5	35.9
HORVU5Hr1G063430.8	Barley	plasma membrane	37.17	35.46
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	40.07	35.37
Zm00001d018329_P001	Maize	plasma membrane	39.4	35.3
VIT_18s0122g00990.t01	Wine grape	plasma membrane	36.16	34.69
TraesCS6B01G380900.1	Wheat	plasma membrane	37.17	34.58
VIT_12s0059g02270.t01	Wine grape	plasma membrane	35.49	34.42
VIT_03s0038g03920.t01	Wine grape	plasma membrane	34.26	33.48
VIT_19s0014g01830.t01	Wine grape	plasma membrane	28.35	33.07
VIT_12s0059g02260.t01	Wine grape	plasma membrane	33.04	32.56
VIT_10s0003g00790.t01	Wine grape	plasma membrane	32.03	31.33
VIT_07s0031g02170.t01	Wine grape	plasma membrane	32.37	30.98
VIT_10s0003g00760.t01	Wine grape	plasma membrane	30.58	26.97
VIT_19s0014g01760.t01	Wine grape	plasma membrane	31.03	24.93
VIT_19s0014g01770.t01	Wine grape	cytosol	33.48	18.98
Os09t0428750-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	EntrezGene:100260624	wikigene:100260624	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300
InterPro:ANF_lig-bd_rcpt	ProteinID:CCB48858	ProteinID:CCB48858.1	UniProt:F6H9G5	EMBL:FN595500	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	EntrezGene:LOC100260624	wikigene:LOC100260624
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF3
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix
UniParc:UPI00015CC5FF	ArrayExpress:VIT_04s0069g00560	EnsemblPlantsGene:VIT_04s0069g00560	EnsemblPlants:VIT_04s0069g00560.t01	RefSeq:XP_002271013	RefSeq:XP_002271013.2
RefSeq:XP_019074835.1	SEG:seg	:	:	:	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:F6H9G5]

Coordinates

chr4:+:8508975..8513037

Molecular Weight (calculated)

100184.0 Da

IEP (calculated)

6.468

GRAVY (calculated)

0.021

Length

896 amino acids

Sequence
(BLAST)

001: MAMSQNTTIP VKVGVVLDMD TWLGKMGLSC ITMALSDFYA SHGHYKTRLV LEIRDSKRDV VGAAAAALDL LQNEEVQAII GPASSMQANF VIGLGDKAHV
101: PIISFSATSP SLSSIRSPYF VRATLNDSAQ VPAIRAIVQA FGWRQVVLIY LDNEYGNGVI PYLTDALQEI DTRISYRSVI HPLATDDQIL EELYKLMTMP
201: TRVFIVHMFT PLGPRLFGRA NEIGMMEEGF VWILTDGLTD ILSTLDPSVI DSMQGVLGVK PHVPRSKELE SFKIRWKREI QQEYPTNESF ELNIFGLWAY
301: DAASGLAMAV EKLGATNFSF QKSHISRNST DLDTVGVSLI GPKLLQSLLN TRFRGLSGDF QIVNRQLHSS AFQVVNVIRK GERGVGFWTP ENGTVRKLDS
401: TSKPNLGTIV WPGESPSVPK GWVLPTNEKK LRIGVPVGQG YSEFVKVTRD PSSNTTEVTG FSIAVFDAAM VALPYVVPYE YIPFEGPDGK QAGDYNDLIY
501: QVYLQKYDAV VGDTTILANR SLYVDFTLPY TDSGLSMVVP TIDKRKKNAW VFLKPLTWDL WVTSFCFFVF TGFVIWVLEH RVNKDFRGPR SHQVGTIFWF
601: SFSTLVFTQK ERIVSNLARI VMIIWFFVVL ILTQSYTASL ASMLTVQQLN PTITDINELI KKGEPVGCQN DSFVCEFLIE SMKFDESKLV KYESPEELDE
701: LFSNKSSKGG IAAAFDEIPY MKIFLAKYCS KYTAVGPTYK FDGFGFVFPK GSPLVADVSR EVLNVTEGAK MLQFEKAWFG QTPSCPELTS SVSSNSIGLN
801: SFWGLFLIAG VASCVALTTC ITMFLYENRD ILINLNPSSS IWGKIKAMAT RFEDKDLRSH TFRNSDLSSN RPMHPHILFE YELANINHEQ TRCHAP

Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)

001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.