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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 4
  • golgi 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 90.53 90.9
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 89.92 89.92
TraesCS5A01G218000.1 Wheat plasma membrane 89.61 89.8
HORVU5Hr1G063480.2 Barley golgi, plasma membrane 77.39 77.79
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 40.02 72.91
KXG35672 Sorghum mitochondrion, plasma membrane 68.84 69.69
Zm00001d005783_P002 Maize plasma membrane 68.43 68.92
Os09t0431200-01 Rice endoplasmic reticulum, extracellular 65.89 68.11
Zm00001d020568_P001 Maize golgi 65.48 66.91
GSMUA_Achr6P01870_001 Banana cytosol 47.25 52.97
VIT_04s0069g00560.t01 Wine grape plasma membrane 40.43 44.31
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 24.85 43.96
VIT_04s0069g00540.t01 Wine grape plasma membrane 31.16 43.28
VIT_04s0069g00170.t01 Wine grape plasma membrane 40.53 42.98
VIT_04s0069g00200.t01 Wine grape cytosol 19.25 42.86
VIT_04s0069g00670.t01 Wine grape plasma membrane 40.02 42.76
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 36.05 42.75
KRH50533 Soybean plasma membrane 34.73 42.52
VIT_04s0069g00620.t01 Wine grape plasma membrane 42.16 41.82
VIT_04s0069g00380.t01 Wine grape cytosol 17.41 41.71
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 25.15 41.65
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 36.35 41.22
VIT_04s0069g00720.t01 Wine grape cytosol 24.95 41.04
CDY31759 Canola cytosol, peroxisome, plasma membrane 19.55 40.76
KRH50532 Soybean plasma membrane 33.1 40.22
VIT_04s0069g00060.t01 Wine grape plasma membrane 40.02 40.14
HORVU5Hr1G063490.1 Barley golgi, vacuole 17.31 40.0
CDY31756 Canola cytosol, peroxisome, plastid 35.23 39.86
CDY50141 Canola plasma membrane 21.49 39.81
HORVU5Hr1G072170.1 Barley plasma membrane 32.28 39.72
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 37.68 39.61
Bra040760.1-P Field mustard cytosol 33.91 39.55
AT2G29100.2 Thale cress plasma membrane 37.88 39.49
Solyc08g006500.2.1 Tomato extracellular 39.0 39.44
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 19.96 39.2
CDY70035 Canola cytosol, plasma membrane 32.28 39.18
AT2G29120.1 Thale cress plasma membrane 37.78 38.97
VIT_04s0069g00230.t01 Wine grape plasma membrane 40.43 38.81
HORVU5Hr1G063500.1 Barley plasma membrane 36.66 38.75
AT2G29110.2 Thale cress plasma membrane 37.27 38.61
CDY31755 Canola cytosol 36.05 38.35
HORVU5Hr1G063530.5 Barley plasma membrane 35.74 38.28
Bra040761.1-P Field mustard cytosol 36.05 38.02
CDY38574 Canola plasma membrane 37.37 37.95
HORVU5Hr1G063540.6 Barley plasma membrane 35.23 37.94
HORVU5Hr1G010420.17 Barley plasma membrane 34.73 37.89
Bra023313.1-P Field mustard plasma membrane 32.99 37.72
CDX85724 Canola plasma membrane 32.99 37.72
CDY39533 Canola plasma membrane 37.27 37.69
CDY58212 Canola cytosol, plasma membrane 31.98 37.65
CDY51113 Canola plasma membrane 32.69 37.37
HORVU7Hr1G081410.3 Barley plasma membrane 21.59 37.06
Bra032072.1-P Field mustard plasma membrane 33.6 36.83
HORVU6Hr1G083680.5 Barley plasma membrane 37.88 36.72
AT4G31710.2 Thale cress plasma membrane 33.91 36.51
HORVU6Hr1G083570.16 Barley plasma membrane 37.78 36.44
AT5G27100.1 Thale cress plasma membrane 33.4 36.4
CDY54213 Canola plasma membrane 32.79 36.22
AT2G24720.1 Thale cress plasma membrane 33.81 36.09
AT5G11210.5 Thale cress plasma membrane 33.71 36.06
Bra032063.1-P Field mustard plasma membrane 33.5 35.64
HORVU7Hr1G031400.1 Barley plasma membrane 26.27 35.54
CDY00544 Canola plasma membrane 28.11 35.43
AT2G24710.3 Thale cress plasma membrane 32.79 35.04
CDY36173 Canola plasma membrane 28.72 34.99
CDY45595 Canola plasma membrane 30.45 34.77
CDX72325 Canola plasma membrane 23.83 34.72
CDX73196 Canola cytosol, peroxisome, plasma membrane 32.18 34.61
PGSC0003DMT400023744 Potato cytosol 30.65 34.44
AT5G11180.2 Thale cress plasma membrane 33.71 34.23
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 35.03 33.89
CDY56837 Canola plasma membrane 30.86 33.01
CDY68132 Canola plasma membrane 33.4 32.51
Bra015817.1-P Field mustard plasma membrane 33.4 32.51
HORVU6Hr1G009520.1 Barley plasma membrane 30.65 32.51
HORVU5Hr1G063430.8 Barley plasma membrane 30.96 32.37
HORVU0Hr1G018770.1 Barley plasma membrane 26.37 32.25
HORVU2Hr1G045730.6 Barley plasma membrane 30.14 31.97
HORVU0Hr1G036590.3 Barley plasma membrane 29.94 31.51
HORVU2Hr1G049510.4 Barley plasma membrane 29.94 31.51
CDY13449 Canola cytosol 30.04 30.76
HORVU1Hr1G086120.3 Barley plasma membrane 29.23 30.76
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 28.31 29.73
HORVU2Hr1G104920.3 Barley plasma membrane 28.72 29.68
Bra023989.1-P Field mustard cytosol 29.53 29.44
CDY63640 Canola cytosol 15.17 27.44
VIT_04s0069g00330.t01 Wine grape plastid 40.22 22.44
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300EMBL:AK365357InterPro:ANF_lig-bd_rcpt
UniProt:F2DN89GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:HORVU5Hr1G063440EnsemblPlants:HORVU5Hr1G063440.1
InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF6InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0002006A1DSEG:seg:
Description
Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:F2DN89]
Coordinates
chrchr5H:-:492427799..492435213
Molecular Weight (calculated)
108782.0 Da
IEP (calculated)
7.474
GRAVY (calculated)
-0.135
Length
982 amino acids
Sequence
(BLAST)
001: MTTAPTLLRA STAALRRHGL LLVLLLPLIG SSGVAAQGGG AVPRQRRQVV DVGVILDSKT WAGNISLACM EQALEDFYAD AGRARYRTRL KLHLRDTGPS
101: AVDAASAGVD LLKNVRVQAI VGPQTSTQAK FLAELGNKSR VPIISFSADC PSRSGLTPYF IRTAWNDSSQ AKAIASLVQN YNWREVVSVY EDDDTNIKFI
201: PDLVDALKQV DTRVSYRCKI HPTATEEDMK TAISSLRQNW TSVFVVRMSH TLAHKFFQLA KQEGMMSQGF VWITAYGLTD IFDVVGSPAL DVMQGVLGVK
301: PHVQDTVELQ NFRQRWRKKY RLKNPGTSLS EPTVSGLYAY DTIWALALAA EKAGYVNSGF GLSLTKNGST DFDRIDTSKA AEKLRGALLK VKFLGISGKF
401: HIEDMQLVSS NYTIINIVGQ ERREIGFWTP GFGISGNPKM KSDLNTIIWP GCNHSSGCNE TSPRGWILPT NKTLIIGMPV KPGFEGFVRF ENGTATGFCV
501: DVFEAVVKEL PYHVPRVYEQ FGDGEGSSNG TYDELVYEVY LKRYDAVVGD ITILANRSSY VDFTLPYTES GVRMLVPVQD RRQKTAWTFL RPFTADLWLG
601: TGAFFVFTGF VVWSIEHRIN QDFRGSPASQ IGSVFYFSFS TLVFAHREQI LHNLSRIAIV VWLFVALIVQ QSYTASLSSI LTVEQLQPTV TNLEEVIRNG
701: GNVGYLNDSF LPGLLKRLKI DESKMIAFDS PVEYNEALST GKVAVIVDEI PYLKVFLSKY CQNYTMVGPT YKFDGFGYAF PRGSPLTPDI SRGILKFASD
801: DRMVKMQNEL YGYTSCPDKD DSQTSSSLTL HSFQGLFIIS GVSSVLALVL HAVITIYNNR HEFSSDSSQS SWRRWPVVLS KLFHGDDSPS NTPVEDEAAT
901: ENVGSAVETP LSIRIPGHIV EHLSNTETGS PQEGEGTPGR EISVQDTEPL SFAYMHSERG QNRVASLSRS GSSIRRRQIS ME
Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)
001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ
Arabidopsis Description
ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.