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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 68.3 85.83
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 51.25 81.8
HORVU5Hr1G010420.17 Barley plasma membrane 76.19 67.56
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 61.15 66.94
HORVU5Hr1G063540.6 Barley plasma membrane 74.31 65.02
OQU89534 Sorghum plasma membrane 67.29 58.95
EER98936 Sorghum plasma membrane 69.42 58.56
HORVU5Hr1G063530.5 Barley plasma membrane 56.39 49.07
HORVU5Hr1G063500.1 Barley plasma membrane 55.89 48.01
VIT_04s0069g00200.t01 Wine grape cytosol 26.44 47.85
VIT_04s0069g00380.t01 Wine grape cytosol 23.81 46.34
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 32.08 46.13
VIT_04s0069g00720.t01 Wine grape cytosol 32.08 42.88
GSMUA_Achr3P04970_001 Banana plasma membrane 51.25 42.74
VIT_04s0069g00540.t01 Wine grape plasma membrane 36.72 41.44
HORVU7Hr1G081410.3 Barley plasma membrane 29.45 41.08
VIT_04s0069g00560.t01 Wine grape plasma membrane 45.99 40.96
VIT_04s0069g00170.t01 Wine grape plasma membrane 46.49 40.06
GSMUA_Achr9P13570_001 Banana plasma membrane 44.86 39.25
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 40.73 39.25
VIT_04s0069g00670.t01 Wine grape plasma membrane 44.86 38.96
VIT_04s0069g00620.t01 Wine grape plasma membrane 46.62 37.58
Bra032072.1-P Field mustard plasma membrane 41.73 37.17
KRH50533 Soybean plasma membrane 37.09 36.91
VIT_04s0069g00060.t01 Wine grape plasma membrane 45.24 36.87
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 39.97 36.84
Solyc08g006500.2.1 Tomato extracellular 44.36 36.46
AT2G29100.2 Thale cress plasma membrane 42.61 36.09
AT2G29110.2 Thale cress plasma membrane 42.86 36.08
AT2G24720.1 Thale cress plasma membrane 41.23 35.76
CDY54213 Canola plasma membrane 39.72 35.66
KRH50532 Soybean plasma membrane 35.84 35.4
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 41.23 35.22
VIT_04s0069g00230.t01 Wine grape plasma membrane 44.74 34.9
Bra023313.1-P Field mustard plasma membrane 37.34 34.69
AT2G29120.1 Thale cress plasma membrane 41.35 34.66
CDY00544 Canola plasma membrane 33.71 34.53
CDX85724 Canola plasma membrane 37.09 34.46
AT5G27100.1 Thale cress plasma membrane 38.85 34.41
Bra032063.1-P Field mustard plasma membrane 39.72 34.34
CDY51113 Canola plasma membrane 36.97 34.34
AT2G24710.3 Thale cress plasma membrane 39.47 34.28
CDY36173 Canola plasma membrane 34.09 33.75
Bra040760.1-P Field mustard cytosol 35.46 33.61
CDY38574 Canola plasma membrane 40.73 33.61
CDX72325 Canola plasma membrane 28.2 33.38
CDY31756 Canola cytosol, peroxisome, plastid 36.22 33.29
CDY45595 Canola plasma membrane 35.84 33.26
CDY63640 Canola cytosol 22.56 33.15
CDY31755 Canola cytosol 38.22 33.04
CDY39533 Canola plasma membrane 40.1 32.96
CDY70035 Canola cytosol, plasma membrane 33.33 32.88
Bra040761.1-P Field mustard cytosol 38.22 32.76
CDY56837 Canola plasma membrane 37.59 32.68
AT5G11210.5 Thale cress plasma membrane 37.47 32.57
AT4G31710.2 Thale cress plasma membrane 37.22 32.57
PGSC0003DMT400023744 Potato cytosol 35.46 32.38
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 24.06 32.38
HORVU5Hr1G063440.1 Barley plasma membrane 39.72 32.28
CDX73196 Canola cytosol, peroxisome, plasma membrane 36.47 31.87
HORVU5Hr1G063480.2 Barley golgi, plasma membrane 38.72 31.63
CDY58212 Canola cytosol, plasma membrane 32.96 31.53
HORVU7Hr1G031400.1 Barley plasma membrane 28.32 31.13
AT5G11180.2 Thale cress plasma membrane 37.72 31.13
HORVU5Hr1G063430.8 Barley plasma membrane 36.47 30.99
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 38.6 30.34
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 20.43 30.24
HORVU6Hr1G083680.5 Barley plasma membrane 38.22 30.11
CDY68132 Canola plasma membrane 37.97 30.03
Bra015817.1-P Field mustard plasma membrane 37.97 30.03
CDY13449 Canola cytosol 35.84 29.82
HORVU6Hr1G083570.16 Barley plasma membrane 37.72 29.57
Bra023989.1-P Field mustard cytosol 36.47 29.54
HORVU2Hr1G045730.6 Barley plasma membrane 32.33 27.86
CDY31759 Canola cytosol, peroxisome, plasma membrane 15.79 26.75
HORVU6Hr1G009520.1 Barley plasma membrane 30.45 26.24
CDY50141 Canola plasma membrane 17.42 26.23
HORVU0Hr1G036590.3 Barley plasma membrane 30.58 26.15
HORVU2Hr1G049510.4 Barley plasma membrane 30.58 26.15
HORVU0Hr1G018770.1 Barley plasma membrane 26.07 25.9
HORVU1Hr1G086120.3 Barley plasma membrane 29.82 25.51
HORVU5Hr1G063490.1 Barley golgi, vacuole 13.53 25.41
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 29.2 24.92
HORVU2Hr1G104920.3 Barley plasma membrane 28.82 24.21
VIT_04s0069g00330.t01 Wine grape plastid 45.24 20.51
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A287RRB4InterPro:ANF_lig-bd_rcpt
GO:GO:0003674GO:GO:0004871GO:GO:0004930GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0007186GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:GPCR_3
EnsemblPlantsGene:HORVU5Hr1G072170EnsemblPlants:HORVU5Hr1G072170.1InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497
PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR00248PANTHER:PTHR43891PANTHER:PTHR43891:SF19InterPro:Peripla_BP_I
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelix
UniParc:UPI000B4670CESEG:seg::::
Description
Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A287RRB4]
Coordinates
chrchr5H:+:535092478..535108667
Molecular Weight (calculated)
88497.7 Da
IEP (calculated)
6.806
GRAVY (calculated)
0.066
Length
798 amino acids
Sequence
(BLAST)
001: MERGRRSIFF LLLLIAGFGA AQNGSGKADE FHVGVILDLG SLVGKVARTS VLLAAQEFYA VHQNYSTKLA LHVMDSVGSD VQAASAAIEL LESYKVQAII
101: GPQKSSEAVF ISNIGNVTQV PVISFTATSP ALASDNMPYF VRATLDDSAQ VKSIATLVQA CGWREVVVVY EDTDYGRDIL PYLTDALQEI DTRVPYRSVI
201: PSAATNEAII QELSVLLAMQ TRVFIVHMSS SMASLLFTKA KEAGMMNKGF AWITTNGVAN IIDSLNPSVI DAMNGVLGVR YHVPRSQKLD NLSIRWNRMY
301: QHDNPGESPF NKLSIVGLWG YDAIWALAQA VEKVGISGDR VKQPWSTKNS TCLESIPISS KGPELLTTIV QNKFKGLSGD FDLTDRKQLK VSVFQIINVV
401: ERGWREIGFW TINGLSRKSK KDYFRKIGQA SMLDLNPVIW PGESTEIPIG WEIPTGGKKL RVGVCSSEFT EFIKTYKDPI TNETTASGLS IDIFEEAVKR
501: LHRPLSYEYI EFDTADAPIS RSYNDFVYQV YLQEYDIAVA DITRRYNRSL YVDFTVAYTD SGVGMIVPVK ENVNTDMWLF LKPLSTEMWF GSVVFFIFTG
601: VVIWVLEHLI GNEHVHVPFS LKQLAIMILS IFEEKEELKR FLARIVLRVW RVVLLVLAAS YTASFASMLT VQQLSPTVTD VHELQKNGQY VGFHQGSYVE
701: GLLLDIGFHT SKIRPYATPD DFHTALSNGS IAAFIHEVPY IKLFLAKYSK GYTMVAPIYK SAGFAFALPK NSPLVAEMSR AIDNITGGXX XKEMDRSK
Best Arabidopsis Sequence Match ( AT2G24720.1 )
(BLAST)
001: MKNSKLFFRF LFLFFFFCLE SSRGQDNGKT QVNIGVVSDV GTSYPDVAML CINMSLADFY SSRPQFQTRL VVNVGDSKND VVGAATAAID LIKNKQVKAI
101: LGPWTSMQAH FLIEIGQKSR VPVVSYSATS PSLTSLRSPY FFRATYEDSS QVHAIKAIIK LFGWREVVPV YIDNTFGEGI MPRLTDSLQD INVRIPYRSV
201: IPLNATDQDI SVELLKMMNM PTRVFIVHMS SSLASTVFIK AKELGLMKPG YVWILTNGVM DGLRSINETG IEAMEGVLGI KTYIPKSKDL ETFRSRWKRR
301: FPQMELNVYG LWAYDATTAL AMAIEDAGIN NMTFSNVDTG KNVSELDGLG LSQFGPKLLQ TVSTVQFKGL AGDFHFVSGQ LQPSVFEIVN MIGTGERSIG
401: FWTEGNGLVK KLDQEPRSIG TLSTWPDHLK HIIWPGEAVS VPKGWEIPTN GKKLRIGVPK RIGFTDLVKV TRDPITNSTV VKGFCIDFFE AVIQAMPYDV
501: SYEFFPFEKP NGEPAGNHND LVHQVYLGQF DAVVGDTTIL ANRSSFVDFT LPFMKSGVGL IVPLKDEVKR DKFSFLKPLS IELWLTTLVF FFLVGISVWT
601: LEHRVNSDFR GPANYQASTI FWFAFSTMVF APRERVLSFG ARSLVVTWYF VLLVLTQSYT ASLASLLTSQ QLNPTITSMS SLLHRGETVG YQRTSFILGK
701: LNETGFPQSS LVPFDTAEEC DELLKKGPKN GGVAAAFLGT PYVRLFLGQY CNTYKMVEEP FNVDGFGFVF PIGSPLVADV SRAILKVAES PKAVELEHAW
801: FKKKEQSCPD PVTNPDSNPT VTAIQLGVGS FWFLFLVVFV VCVLALGKFT FCFLWKTKGK DLWKEFLKRD TDSYINDIEK CLCSQEMPEN SNKATNQTNY
901: GMELRVRNIV QVNQTDPDCL
Arabidopsis Description
GLR2.2Glutamate receptor 2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.