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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G217700.1 Wheat plasma membrane 93.86 93.76
TraesCS5A01G218600.1 Wheat plasma membrane 93.42 93.32
TraesCS5D01G226600.1 Wheat plasma membrane 93.86 92.14
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 41.89 76.4
HORVU5Hr1G072170.1 Barley plasma membrane 65.02 74.31
HORVU5Hr1G010420.17 Barley plasma membrane 72.04 73.0
EER98936 Sorghum plasma membrane 73.36 70.72
OQU89534 Sorghum plasma membrane 68.53 68.61
HORVU5Hr1G063530.5 Barley plasma membrane 55.59 55.29
HORVU5Hr1G063500.1 Barley plasma membrane 56.14 55.11
HORVU7Hr1G081410.3 Barley plasma membrane 32.02 51.05
GSMUA_Achr3P04970_001 Banana plasma membrane 51.54 49.11
VIT_04s0069g00200.t01 Wine grape cytosol 23.14 47.85
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 28.84 47.39
VIT_04s0069g00380.t01 Wine grape cytosol 20.72 46.1
GSMUA_Achr9P13570_001 Banana plasma membrane 44.85 44.85
VIT_04s0069g00720.t01 Wine grape cytosol 29.06 44.39
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 40.24 44.32
VIT_04s0069g00560.t01 Wine grape plasma membrane 43.09 43.86
VIT_04s0069g00540.t01 Wine grape plasma membrane 33.99 43.85
VIT_04s0069g00170.t01 Wine grape plasma membrane 43.2 42.55
VIT_04s0069g00670.t01 Wine grape plasma membrane 42.21 41.89
VIT_04s0069g00620.t01 Wine grape plasma membrane 44.63 41.11
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 38.82 40.88
VIT_04s0069g00060.t01 Wine grape plasma membrane 42.76 39.84
Bra032072.1-P Field mustard plasma membrane 38.6 39.29
AT2G29110.2 Thale cress plasma membrane 40.46 38.92
KRH50532 Soybean plasma membrane 34.43 38.86
KRH50533 Soybean plasma membrane 34.1 38.78
Bra018409.1-P Field mustard cytosol, nucleus, plasma membrane 39.25 38.33
AT2G29100.2 Thale cress plasma membrane 39.58 38.32
Solyc08g006500.2.1 Tomato extracellular 40.79 38.31
Bra040758.1-P Field mustard cytosol, peroxisome, plasma membrane 24.89 38.28
VIT_04s0069g00230.t01 Wine grape plasma membrane 42.54 37.93
Bra040760.1-P Field mustard cytosol 34.87 37.77
CDY70035 Canola cytosol, plasma membrane 33.33 37.58
AT2G24720.1 Thale cress plasma membrane 37.83 37.5
CDY00544 Canola plasma membrane 31.91 37.36
AT5G27100.1 Thale cress plasma membrane 36.84 37.29
CDY31756 Canola cytosol, peroxisome, plastid 35.42 37.21
CDY54213 Canola plasma membrane 35.96 36.9
CDY31755 Canola cytosol 37.28 36.84
PGSC0003DMT400023744 Potato cytosol 35.2 36.73
Bra032063.1-P Field mustard plasma membrane 37.06 36.62
CDY51113 Canola plasma membrane 34.43 36.55
Bra040761.1-P Field mustard cytosol 37.28 36.52
CDY38574 Canola plasma membrane 38.71 36.5
AT2G29120.1 Thale cress plasma membrane 38.05 36.45
AT2G24710.3 Thale cress plasma membrane 36.62 36.34
Bra023313.1-P Field mustard plasma membrane 34.21 36.32
CDY36173 Canola plasma membrane 31.91 36.1
CDX85724 Canola plasma membrane 33.99 36.09
CDY39533 Canola plasma membrane 38.27 35.94
CDY45595 Canola plasma membrane 33.66 35.7
CDY31759 Canola cytosol, peroxisome, plasma membrane 18.31 35.46
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 20.94 35.44
HORVU5Hr1G063440.1 Barley plasma membrane 37.94 35.23
CDX72325 Canola plasma membrane 25.99 35.16
CDY58212 Canola cytosol, plasma membrane 32.13 35.13
AT5G11210.5 Thale cress plasma membrane 35.09 34.86
HORVU7Hr1G031400.1 Barley plasma membrane 27.63 34.71
CDY56837 Canola plasma membrane 34.65 34.42
HORVU5Hr1G063480.2 Barley golgi, plasma membrane 36.73 34.29
CDX73196 Canola cytosol, peroxisome, plasma membrane 34.21 34.17
HORVU6Hr1G083680.5 Barley plasma membrane 37.94 34.16
AT4G31710.2 Thale cress plasma membrane 34.1 34.1
HORVU6Hr1G083570.16 Barley plasma membrane 37.94 33.99
HORVU5Hr1G063430.8 Barley plasma membrane 34.21 33.23
AT5G11180.2 Thale cress plasma membrane 34.87 32.89
CDY50141 Canola plasma membrane 18.97 32.64
CDY68132 Canola plasma membrane 35.64 32.21
Bra015817.1-P Field mustard plasma membrane 35.64 32.21
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 35.64 32.02
CDY63640 Canola cytosol 18.97 31.86
CDY13449 Canola cytosol 33.0 31.39
HORVU5Hr1G063490.1 Barley golgi, vacuole 14.47 31.06
HORVU2Hr1G045730.6 Barley plasma membrane 31.47 30.99
Bra023989.1-P Field mustard cytosol 33.44 30.96
HORVU2Hr1G049510.4 Barley plasma membrane 30.37 29.69
HORVU0Hr1G036590.3 Barley plasma membrane 30.37 29.69
HORVU1Hr1G086120.3 Barley plasma membrane 30.26 29.58
HORVU6Hr1G009520.1 Barley plasma membrane 29.82 29.37
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 29.82 29.09
HORVU0Hr1G018770.1 Barley plasma membrane 25.55 29.02
HORVU2Hr1G104920.3 Barley plasma membrane 29.71 28.53
VIT_04s0069g00330.t01 Wine grape plastid 42.43 21.99
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300EMBL:AK371221InterPro:ANF_lig-bd_rcpt
UniProt:F2E4Z7GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:HORVU5Hr1G063540EnsemblPlants:HORVU5Hr1G063540.6
InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090
PANTHER:PTHR43891PANTHER:PTHR43891:SF11InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850
SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0002007C8DSEG:seg:
Description
Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:F2E4Z7]
Coordinates
chrchr5H:-:493147002..493159134
Molecular Weight (calculated)
101603.0 Da
IEP (calculated)
6.325
GRAVY (calculated)
-0.043
Length
912 amino acids
Sequence
(BLAST)
001: MEKTPRTILF LLLLLLGDLG VAQDTTSKAD EFHVGVILNL GSLVGKVART SISLAVEDFY AAHRNYSTKL VLHVRDSMGN DIQAASAAIE LLDNYKLQAI
101: IGPQKSSEAV LISKIGNITR VPIVSFTATS PSLTSDTMPY FVRATLNDSA QVSSIASLVK AYGWREVVLV YDNTDYGRGI LPYLISALQE SDIHVLYQSV
201: ITSSATSEIM MQELYKLMTM QTRVFIVHMS SRLTSLLFTK AKEAGMMDKG FAWITTNGVA NIIDSLNPSV IEVMNGVLGV RYHVPKSREL DNFSIRWNRM
301: YQQDNPDESP FNKLSIVGLW AYDTIWALAQ AAEKVGISSA TNKQPWPVKN STCLESMVIS TNGPELLTAI VQNKFRGISG DFDLTDRQLK VSVFQIINVV
401: GRGWREIGFW SVKSGLSRQL NQNSLKTTGS ASILDLNPVI WPGESTEIPR GWEIPISGKK LRVGVHTSNC PEFIKTFRDP VTNVTSASGL SVDIFEEAIK
501: RLPFALTYEY LAFDTADTAS TGSYNDFIYQ VYLQKYDIAV GDITVRYNRS LYVDFTVPYT ESGVGMIVPV KENMIKNMWI FLKPLSTGMW FGSIIFFIYT
601: GVVAWLLEYL NGNQHVHGPF SLKQVGITIF FSIFEEKEKL TRFLSRIVLL VWMFVFLVLT SSYTASFASM LTVQQLSPTV TDVHELQRKG EYVGFHRGSY
701: IEGLLVDIGF ERSKIRPYET QEDFSAALSK GSKNGGIAAL VHEVPYIKLF LAKYSKGYAM VGPIYKSAGF AFALPKQSPL RAEISRAILN ITGEDSINEI
801: EKKWIYQNSH QHEDKIDGSG AITFESFGGL FLLTGVVTTC SLAVAMLMNW YKKYQQNAWS KEDDQNECGH GKQGENGDSQ EEQGDQNSNE HGNCSDIEKQ
901: TTLTVSLSSN TE
Best Arabidopsis Sequence Match ( AT2G29110.2 )
(BLAST)
001: MMNPKKNNNT FLSYFVCLFL LLEVGLGQNQ ISEIKVGVVL DLNTTFSKIC LTSINLALSD FYKDHPNYRT RLALHVRDSM KDTVQASAAA LDLIQNEQVS
101: AIIGPIDSMQ AKFMIKLANK TQVPTISFSA TSPLLTSIKS DYFVRGTIDD SYQVKAIAAI FESFGWRSVV AIYVDNELGE GIMPYLFDAL QDVQVDRSVI
201: PSEANDDQIL KELYKLMTRQ TRVFVVHMAS RLASRIFEKA TEIGMMEEGY VWLMTNGMTH MMRHIHHGRS LNTIDGVLGV RSHVPKSKGL EDFRLRWKRN
301: FKKENPWLRD DLSIFGLWAY DSTTALAMAV EKTNISSFPY NNASGSSNNM TDLGTLHVSR YGPSLLEALS EIRFNGLAGR FNLIDRQLES PKFEIINFVG
401: NEERIVGFWT PSNGLVNVNS NKTTSFTGER FGPLIWPGKS TIVPKGWEIP TNGKKIKVGV PVKKGFFNFV EVITDPITNI TTPKGYAIDI FEAALKKLPY
501: SVIPQYYRFE SPDDDYDDLV YKVDNGTLDA VVGDVTITAY RSLYADFTLP YTESGVSMMV PVRDNENKNT WVFLKPWGLD LWVTTACFFV LIGFVVWLFE
601: HRVNTDFRGP PHHQIGTSFW FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAN LTSFLTVQRF QPAAINVKDL IKNGDYVGYQ HGAFVKDFLI
701: KEGFNVSKLK PFGSSEECHA LLSNGSISAA FDEVAYLRAI LSQYCSKYAI VEPTFKTAGF GFAFPRNSPL TGDVSKAILN VTQGDEMQHI ENKWFMKQND
801: CPDPKTALSS NRLSLRSFWG LFLIAGIASF LALLIFVFLF LYENRHTLCD DSEDSIWRKL TSLFRNFDEK DIKSHTFKSS AVHHVSSPMT QYIPSPSTLQ
901: IAPRPHSPSQ DRAFELRRVS FTPNEERLTT QTIHFEDEES DIECVVEQ
Arabidopsis Description
ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.