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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70035 Canola cytosol, plasma membrane 84.89 87.52
CDY31755 Canola cytosol 94.84 85.7
CDY31759 Canola cytosol, peroxisome, plasma membrane 44.84 79.41
CDY31756 Canola cytosol, peroxisome, plastid 79.38 76.27
CDY50141 Canola plasma membrane 46.04 72.45
CDY39533 Canola plasma membrane 74.82 64.26
CDY38574 Canola plasma membrane 74.1 63.91
AT2G29110.2 Thale cress plasma membrane 69.9 61.5
AT2G29100.2 Thale cress plasma membrane 67.15 59.45
VIT_04s0069g00010.t01 Wine grape mitochondrion, plasma membrane 48.56 46.77
VIT_04s0069g00390.t01 Wine grape mitochondrion, plasma membrane 46.04 46.38
PGSC0003DMT400067658 Potato plastid 45.92 44.9
VIT_04s0069g00560.t01 Wine grape plasma membrane 46.4 43.19
VIT_04s0069g00170.t01 Wine grape plasma membrane 47.84 43.09
VIT_04s0069g00670.t01 Wine grape plasma membrane 46.76 42.44
GSMUA_Achr7P16350_001 Banana cytosol, peroxisome, plasma membrane 35.73 40.88
VIT_04s0069g00060.t01 Wine grape plasma membrane 47.48 40.45
VIT_04s0069g00620.t01 Wine grape plasma membrane 47.48 40.0
CDX72325 Canola plasma membrane 32.25 39.91
Solyc08g006500.2.1 Tomato extracellular 45.56 39.13
HORVU7Hr1G081410.3 Barley plasma membrane 26.74 38.99
HORVU5Hr1G063420.2 Barley cytosol, peroxisome, plasma membrane 25.18 38.96
VIT_04s0069g00230.t01 Wine grape plasma membrane 47.72 38.91
VIT_04s0069g00540.t01 Wine grape plasma membrane 32.97 38.9
GSMUA_Achr6P01870_001 Banana cytosol 40.53 38.58
HORVU7Hr1G031400.1 Barley plasma membrane 33.45 38.43
GSMUA_Achr6P26740_001 Banana cytosol, plasma membrane, plastid 30.46 38.43
HORVU5Hr1G063490.1 Barley golgi, vacuole 19.54 38.35
CDY36173 Canola plasma membrane 36.57 37.84
CDY51113 Canola plasma membrane 38.13 37.02
CDY00544 Canola plasma membrane 34.53 36.97
GSMUA_AchrUn_... Banana golgi 37.65 36.85
TraesCS2D01G025600.1 Wheat plasma membrane 28.78 36.81
CDX85724 Canola plasma membrane 37.65 36.55
VIT_04s0069g00260.t01 Wine grape endoplasmic reticulum, golgi, vacuole 24.22 36.4
VIT_04s0069g00720.t01 Wine grape cytosol 26.02 36.35
HORVU5Hr1G072250.1 Barley cytosol, peroxisome, plastid 21.7 36.2
OQU89536 Sorghum cytosol 39.21 36.17
Os09t0429000-00 Rice plasma membrane 40.41 36.12
Os06t0190800-01 Rice cytosol, plasma membrane 35.49 36.1
VIT_04s0069g00200.t01 Wine grape cytosol 19.06 36.05
CDY45595 Canola plasma membrane 37.05 35.93
CDX73196 Canola cytosol, peroxisome, plasma membrane 39.33 35.93
TraesCS7B01G242400.1 Wheat plasma membrane 38.97 35.91
GSMUA_Achr3P04970_001 Banana plasma membrane 41.13 35.84
Os09t0428300-00 Rice plasma membrane 37.41 35.78
CDY56837 Canola plasma membrane 39.21 35.62
TraesCS5D01G226500.2 Wheat cytosol 37.41 35.62
CDY54213 Canola plasma membrane 37.89 35.55
VIT_04s0069g00380.t01 Wine grape cytosol 17.39 35.37
TraesCS7A01G341200.1 Wheat plasma membrane 37.65 35.08
KRH50533 Soybean plasma membrane 33.57 34.91
GSMUA_Achr4P02110_001 Banana cytosol 33.81 34.9
KRH50532 Soybean plasma membrane 33.81 34.9
Os09t0429400-00 Rice golgi 38.49 34.37
Os09t0429500-00 Rice plasma membrane 38.97 34.36
TraesCS5A01G218900.1 Wheat plasma membrane 31.89 34.28
TraesCS5B01G217800.1 Wheat plasma membrane 35.01 34.27
TraesCS5A01G218400.1 Wheat plasma membrane 37.77 34.02
GSMUA_Achr9P13570_001 Banana plasma membrane 37.05 33.88
HORVU5Hr1G063500.1 Barley plasma membrane 37.53 33.69
TraesCS5A01G219800.1 Wheat plasma membrane 37.29 33.62
OQU84757 Sorghum plasma membrane 36.33 33.26
TraesCS5D01G227800.1 Wheat plasma membrane 36.81 33.23
TraesCS7B01G057800.1 Wheat plasma membrane 35.01 33.18
Os09t0431200-01 Rice endoplasmic reticulum, extracellular 37.77 33.16
CDY35797 Canola plasma membrane 32.61 33.09
HORVU5Hr1G072170.1 Barley plasma membrane 31.53 32.96
TraesCS5D01G228000.1 Wheat plasma membrane 31.18 32.83
HORVU5Hr1G063530.5 Barley plasma membrane 36.09 32.82
TraesCS5B01G217200.1 Wheat mitochondrion, plasma membrane 38.49 32.82
CDY68132 Canola plasma membrane 39.69 32.8
TraesCS5D01G225900.1 Wheat golgi 33.93 32.68
TraesCS5D01G226100.1 Wheat mitochondrion, plasma membrane 38.25 32.48
HORVU5Hr1G010420.17 Barley plasma membrane 35.01 32.44
TraesCS5A01G218700.1 Wheat plasma membrane 35.61 32.39
KXG35672 Sorghum mitochondrion, plasma membrane 37.53 32.27
KXG19504 Sorghum golgi, plasma membrane, vacuole 33.69 32.26
TraesCS3A01G023600.2 Wheat plasma membrane 34.89 32.26
OQU89527 Sorghum plasma membrane 35.97 32.26
Zm00001d020563_P001 Maize plasma membrane 36.81 32.25
Zm00001d020568_P001 Maize golgi 37.05 32.15
HORVU5Hr1G063480.2 Barley golgi, plasma membrane 37.65 32.14
HORVU5Hr1G063540.6 Barley plasma membrane 35.13 32.13
TraesCS5A01G218200.1 Wheat plasma membrane 37.29 32.09
TraesCS5D01G226300.1 Wheat plasma membrane 36.93 32.05
TraesCS5A01G218000.1 Wheat plasma membrane 37.65 32.04
TraesCS5B01G218900.1 Wheat plasma membrane 36.33 32.03
Zm00001d005783_P002 Maize plasma membrane 37.41 32.0
HORVU5Hr1G063440.1 Barley plasma membrane 37.65 31.98
TraesCS5D01G266900.1 Wheat golgi, plasma membrane 24.34 31.97
TraesCS5D01G226700.3 Wheat plasma membrane 35.13 31.95
TraesCS5D01G266800.1 Wheat plasma membrane 34.17 31.88
TraesCS5A01G218600.1 Wheat plasma membrane 34.89 31.87
TraesCS5B01G218700.1 Wheat plasma membrane 35.61 31.83
TraesCS5B01G217500.1 Wheat plasma membrane 36.33 31.83
TraesCS5B01G217700.1 Wheat plasma membrane 34.77 31.76
CDY06165 Canola plasma membrane 33.09 31.69
TraesCS5A01G259100.1 Wheat cytosol, nucleus, plasma membrane 27.7 31.69
TraesCS5B01G217000.1 Wheat mitochondrion, plasma membrane 33.93 31.66
Zm00001d005782_P001 Maize plasma membrane 37.17 31.63
TraesCS5B01G217400.1 Wheat plasma membrane, plastid 37.53 31.58
Os09t0429200-00 Rice plasma membrane 35.85 31.54
TraesCS5D01G226600.1 Wheat plasma membrane 35.13 31.54
CDY13449 Canola cytosol 36.21 31.49
TraesCS5B01G257800.1 Wheat plasma membrane 34.05 31.45
TraesCS5A01G042800.1 Wheat plasma membrane 33.81 31.4
TraesCS5D01G226400.1 Wheat plasma membrane 35.73 31.4
TraesCS6D01G330900.1 Wheat plasma membrane 37.89 31.35
KXG31244 Sorghum mitochondrion 38.01 31.32
CDY71348 Canola golgi, plasma membrane 9.95 31.32
HORVU6Hr1G083680.5 Barley plasma membrane 38.01 31.29
Os09t0431100-01 Rice plasma membrane 35.73 31.2
Os02t0787600-01 Rice golgi 36.93 31.17
TraesCS5A01G218300.1 Wheat plasma membrane 35.61 31.13
EER98937 Sorghum plasma membrane 35.13 31.01
CDX80728 Canola cytosol 8.99 30.99
TraesCS5B01G046400.1 Wheat plasma membrane 33.21 30.85
TraesCS6B01G380800.1 Wheat plasma membrane 37.77 30.82
TraesCS5D01G226800.1 Wheat plasma membrane 35.13 30.78
KXG35671 Sorghum plasma membrane 36.09 30.71
TraesCS5D01G051300.1 Wheat golgi 33.09 30.7
TraesCS6A01G347900.1 Wheat plasma membrane 37.05 30.65
GSMUA_Achr6P01860_001 Banana cytosol, peroxisome, plasma membrane 35.49 30.64
Zm00001d018332_P001 Maize plastid 36.57 30.62
TraesCS6D01G330500.1 Wheat plasma membrane 37.29 30.58
TraesCS6B01G381400.1 Wheat plasma membrane 36.93 30.37
HORVU6Hr1G083570.16 Barley plasma membrane 37.05 30.35
TraesCS6B01G438400.1 Wheat plasma membrane 32.61 30.19
Os09t0428600-00 Rice plasma membrane 19.54 30.13
TraesCS2D01G462300.1 Wheat plasma membrane 35.13 30.08
TraesCS6A01G347400.1 Wheat plastid 37.41 30.0
EER98936 Sorghum plasma membrane 33.93 29.92
Zm00001d018329_P001 Maize plasma membrane 35.85 29.9
CDY63640 Canola cytosol 19.42 29.83
TraesCS7A01G154100.1 Wheat plasma membrane 33.21 29.59
CDY10044 Canola plasma membrane 32.85 29.18
CDX73718 Canola plasma membrane 31.06 29.07
HORVU5Hr1G063510.1 Barley golgi, mitochondrion, plasma membrane 35.37 29.06
TraesCS5B01G217100.1 Wheat plasma membrane 32.61 29.06
CDX95758 Canola cytosol 14.15 28.99
OQU89534 Sorghum plasma membrane 31.65 28.98
CDX78008 Canola plasma membrane 30.94 28.96
TraesCS5D01G226000.1 Wheat plasma membrane 32.37 28.94
KXG35670 Sorghum plasma membrane 33.81 28.86
HORVU5Hr1G063430.8 Barley plasma membrane 32.37 28.75
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 35.01 28.71
CDY49512 Canola plasma membrane 32.49 28.44
CDX69127 Canola plasma membrane 30.94 28.29
CDY46839 Canola plasma membrane 32.13 28.18
CDX76331 Canola plasma membrane 30.7 28.13
CDY24327 Canola plasma membrane 30.7 28.07
CDY52597 Canola plasma membrane 30.46 27.85
TraesCS6B01G380900.1 Wheat plasma membrane 32.13 27.83
CDX75491 Canola cytosol, plasma membrane, plastid 6.59 26.96
CDY65624 Canola plasma membrane 27.94 26.78
CDY15337 Canola plasma membrane 28.3 26.4
CDX84734 Canola plasma membrane 29.02 26.13
CDY66699 Canola plasma membrane 28.9 26.03
CDY48270 Canola plasma membrane 28.66 25.92
CDY12210 Canola plasma membrane 28.42 25.73
CDY12211 Canola plasma membrane 25.9 24.3
CDY66698 Canola plasma membrane 25.3 23.73
CDX84735 Canola plasma membrane 24.82 23.31
CDY48271 Canola plastid 20.14 22.73
VIT_04s0069g00330.t01 Wine grape plastid 47.48 22.5
CDY68928 Canola extracellular, plasma membrane 14.15 22.14
CDY70557 Canola extracellular, plasma membrane 14.15 22.14
CDX75490 Canola extracellular, plasma membrane, vacuole 14.51 20.79
Os09t0428750-01 Rice mitochondrion 0.72 4.96
CDY72467 Canola cytosol 0.12 1.35
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078J3F9UniProt:A0A078J3F9
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY58212ProteinID:CDY58212ProteinID:CDY58212.1ncoils:CoilGO:GO:0003674
GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0035235GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00023276001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060
PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PANTHER:PTHR43891PANTHER:PTHR43891:SF3InterPro:Peripla_BP_I
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SUPFAM:SSF81324InterPro:Solute-binding_3/MltF_NTMHMM:TMhelix
UniParc:UPI0004EE2B09SEG:seg::::
Description
BnaCnng32830DBnaCnng32830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078J3F9]
Coordinates
chrLK033646:-:47570..51942
Molecular Weight (calculated)
94309.6 Da
IEP (calculated)
8.484
GRAVY (calculated)
-0.218
Length
834 amino acids
Sequence
(BLAST)
001: VANKFQVPTI TFSATSPLLK SIDNPYFVRA TIDDSFQVEA IAAIVKSFGW RSVVAIYVNN EIGKEIMHSL SDALEDVEVQ RSAISQEASD DQILKELYKL
101: KTEQTRAFVI NMDASLGFRV LKKAREIGMM EEGYVWLLSN GMTHMMRDNG RSLETMQGLL GVRSYVPQSK EREDFSLRWK RKLEKENRTG DGTEPNVFAL
201: RAYDSVTALA MAVEKTNTKT YIKTYGSHLI EALSDIEFKG LAGEFKLINR QLESSTFEII NVVGDEERIV GSWTPSSGPV NAKSNKTTLF LGKRFGPVIW
301: PGNSTVVPKG WEIPTTGKKI KVGVPVKKGF INYVEIKTDP ISTVTTTTGY AIDIFEAALK KLPYSVIPQY YGYESPENNY NHLVQQLYEG KWDAVVGDIT
401: ITANRSLYVD FTLPYSESGV SMVVPLRDSK NKNAWVFLQP WSLDLWVTTV CFFVVIGFVV WLLEHRVNTD FRGPPHHQIG TSFWFSFSTM NFAHREKVVS
501: NLARFVVVVW CFVVLVLTQS YTANLTSFLT VQRLQPSATN VEDLIRNGES VGYQHGTFVR DFLRNLNFSE TQLKPFASAE ECDDLLSKGT WKGGIAAAFD
601: EVAYLKDIVS HNCSKYAMVE PSFKTVGFEP SFKTAGFGFA FPKNSPMTKD VSIAILNVTQ GKEMRRIENK WFNRVTSECP DPNSDLSSNR LSLSSFWGLF
701: LIAGVASFLA LLVFVALFLY EHRHTLCSNS EGSIWRKLKS LFRIFDEKDT RSHTFKSNAV HNVSSPITPC TPSPSNVQIR PLPRSMSLNR EFEIRRACFS
801: MSEERFRTQP KHDKQGESDI EFGAERQREV KQTQ
Best Arabidopsis Sequence Match ( AT2G29110.2 )
(BLAST)
001: MMNPKKNNNT FLSYFVCLFL LLEVGLGQNQ ISEIKVGVVL DLNTTFSKIC LTSINLALSD FYKDHPNYRT RLALHVRDSM KDTVQASAAA LDLIQNEQVS
101: AIIGPIDSMQ AKFMIKLANK TQVPTISFSA TSPLLTSIKS DYFVRGTIDD SYQVKAIAAI FESFGWRSVV AIYVDNELGE GIMPYLFDAL QDVQVDRSVI
201: PSEANDDQIL KELYKLMTRQ TRVFVVHMAS RLASRIFEKA TEIGMMEEGY VWLMTNGMTH MMRHIHHGRS LNTIDGVLGV RSHVPKSKGL EDFRLRWKRN
301: FKKENPWLRD DLSIFGLWAY DSTTALAMAV EKTNISSFPY NNASGSSNNM TDLGTLHVSR YGPSLLEALS EIRFNGLAGR FNLIDRQLES PKFEIINFVG
401: NEERIVGFWT PSNGLVNVNS NKTTSFTGER FGPLIWPGKS TIVPKGWEIP TNGKKIKVGV PVKKGFFNFV EVITDPITNI TTPKGYAIDI FEAALKKLPY
501: SVIPQYYRFE SPDDDYDDLV YKVDNGTLDA VVGDVTITAY RSLYADFTLP YTESGVSMMV PVRDNENKNT WVFLKPWGLD LWVTTACFFV LIGFVVWLFE
601: HRVNTDFRGP PHHQIGTSFW FSFSTMVFAH REKVVSNLAR FVVVVWCFVV LVLTQSYTAN LTSFLTVQRF QPAAINVKDL IKNGDYVGYQ HGAFVKDFLI
701: KEGFNVSKLK PFGSSEECHA LLSNGSISAA FDEVAYLRAI LSQYCSKYAI VEPTFKTAGF GFAFPRNSPL TGDVSKAILN VTQGDEMQHI ENKWFMKQND
801: CPDPKTALSS NRLSLRSFWG LFLIAGIASF LALLIFVFLF LYENRHTLCD DSEDSIWRKL TSLFRNFDEK DIKSHTFKSS AVHHVSSPMT QYIPSPSTLQ
901: IAPRPHSPSQ DRAFELRRVS FTPNEERLTT QTIHFEDEES DIECVVEQ
Arabidopsis Description
ATGLR2.8Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A1P8B074]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.