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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75491 Canola cytosol, plasma membrane, plastid 22.64 96.57
CDX76331 Canola plasma membrane 95.52 91.32
CDY71348 Canola golgi, plasma membrane 26.78 87.92
CDX69127 Canola plasma membrane 88.97 84.87
AT4G35290.2 Thale cress plasma membrane 85.4 81.47
CDX75490 Canola extracellular, plasma membrane, vacuole 53.56 80.07
CDY24327 Canola plasma membrane 77.7 74.12
CDY52597 Canola plasma membrane 77.36 73.79
VIT_03s0038g03920.t01 Wine grape plasma membrane 62.18 59.0
KRH14012 Soybean plasma membrane 59.66 56.72
GSMUA_Achr9P23900_001 Banana plasma membrane 54.83 51.96
KRH74102 Soybean cytosol, nucleus, peroxisome 38.62 51.77
GSMUA_Achr3P27050_001 Banana plasma membrane 54.02 51.37
CDY35797 Canola plasma membrane 47.93 50.73
GSMUA_Achr5P19180_001 Banana plasma membrane 50.92 49.22
CDX78008 Canola plasma membrane 50.34 49.16
CDX73718 Canola plasma membrane 50.23 49.05
Os02t0117500-01 Rice plasma membrane 52.53 48.41
Zm00001d015007_P003 Maize plasma membrane 50.11 48.39
CDX80728 Canola cytosol 13.45 48.35
TraesCS6B01G066200.1 Wheat plasma membrane 51.15 48.32
CDY06165 Canola plasma membrane 48.28 48.22
TraesCSU01G108800.1 Wheat plasma membrane 50.92 48.0
TraesCS6A01G049900.1 Wheat plasma membrane 50.8 47.89
TraesCSU01G107900.1 Wheat plasma membrane 50.92 47.84
HORVU0Hr1G018770.1 Barley plasma membrane 44.14 47.82
Os04t0585200-02 Rice extracellular 29.66 47.78
TraesCS2B01G477300.4 Wheat plasma membrane 50.46 47.77
TraesCS2A01G455200.2 Wheat plasma membrane 50.34 47.66
TraesCS6A01G048800.1 Wheat plasma membrane 50.69 47.62
KXG29299 Sorghum plasma membrane 50.69 47.62
TraesCS6A01G048700.1 Wheat plasma membrane 50.57 47.52
CDY70557 Canola extracellular, plasma membrane 29.08 47.47
TraesCS2D01G455600.2 Wheat plasma membrane 50.11 47.44
TraesCSU01G107700.2 Wheat plasma membrane 50.46 47.41
TraesCS6B01G065400.1 Wheat plasma membrane 50.34 47.3
HORVU0Hr1G036590.3 Barley plasma membrane 50.57 47.16
HORVU2Hr1G049510.4 Barley plasma membrane 50.57 47.16
Zm00001d002532_P003 Maize plasma membrane 50.46 47.15
CDY68928 Canola extracellular, plasma membrane 28.85 47.09
TraesCS6B01G065700.1 Wheat plasma membrane 49.89 47.02
TraesCS6B01G065500.1 Wheat plasma membrane 50.0 46.98
HORVU6Hr1G009520.1 Barley plasma membrane 49.89 46.87
KXG26996 Sorghum plasma membrane 50.34 46.84
TraesCSU01G108000.1 Wheat plasma membrane 49.66 46.75
CDY10044 Canola plasma membrane 50.34 46.65
HORVU2Hr1G104920.3 Barley plasma membrane 50.8 46.53
TraesCS6A01G049000.1 Wheat plasma membrane 49.66 46.4
OQU84212 Sorghum mitochondrion 48.16 46.09
CDY49512 Canola plasma membrane 50.46 46.07
CDY46839 Canola plasma membrane 50.23 45.95
Zm00001d054016_P004 Maize plasma membrane 49.89 45.64
CDX95758 Canola cytosol 21.26 45.45
Zm00001d033769_P001 Maize golgi, plasma membrane 31.38 43.26
CDY66698 Canola plasma membrane 43.1 42.18
CDX84735 Canola plasma membrane 42.76 41.89
PGSC0003DMT400038012 Potato plasma membrane 56.67 40.15
CDY48271 Canola plastid 33.68 39.65
CDY48270 Canola plasma membrane 41.38 39.05
CDY12211 Canola plasma membrane 39.77 38.92
CDY66699 Canola plasma membrane 41.26 38.77
CDX84734 Canola plasma membrane 41.26 38.77
CDY15337 Canola plasma membrane 39.66 38.59
CDY12210 Canola plasma membrane 40.8 38.55
CDY70035 Canola cytosol, plasma membrane 27.47 29.54
CDY31756 Canola cytosol, peroxisome, plastid 28.97 29.03
CDY54213 Canola plasma membrane 29.54 28.91
CDY39533 Canola plasma membrane 31.61 28.32
CDY31755 Canola cytosol 29.89 28.17
CDX85724 Canola plasma membrane 27.59 27.94
CDY58212 Canola cytosol, plasma membrane 26.78 27.94
CDY38574 Canola plasma membrane 31.03 27.92
CDY51113 Canola plasma membrane 27.47 27.82
CDX72325 Canola plasma membrane 21.38 27.6
CDY45595 Canola plasma membrane 27.13 27.44
CDY36173 Canola plasma membrane 25.4 27.42
CDY31759 Canola cytosol, peroxisome, plasma membrane 14.83 27.39
CDY56837 Canola plasma membrane 28.28 26.8
CDX73196 Canola cytosol, peroxisome, plasma membrane 27.7 26.4
CDY00544 Canola plasma membrane 23.33 26.06
CDY68132 Canola plasma membrane 28.62 24.68
CDY50141 Canola plasma membrane 14.83 24.34
CDY13449 Canola cytosol 25.86 23.46
CDY63640 Canola cytosol 14.6 23.39
CDY72467 Canola cytosol 0.11 1.35
Os02t0117600-01 Rice plastid 0.11 0.41
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078JG07UniProt:A0A078JG07
InterPro:ANF_lig-bd_rcptEnsemblPlants:CDY65624ProteinID:CDY65624ProteinID:CDY65624.1GO:GO:0003674GO:GO:0004871
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0035235
GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00046935001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497
PFAM:PF01094PIRSF:PIRSF037090PANTHER:PTHR43891PANTHER:PTHR43891:SF18InterPro:Peripla_BP_ISMART:SM00062
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelix
UniParc:UPI0004EF3DF3SEG:seg::::
Description
BnaCnng48020DGlutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A078JG07]
Coordinates
chrLK034865:-:17002..22009
Molecular Weight (calculated)
96460.3 Da
IEP (calculated)
8.045
GRAVY (calculated)
0.022
Length
870 amino acids
Sequence
(BLAST)
001: MSCVLVLLSV IVLSGDGIIS EGASRPHVVN VGAIFGLNTL HGKVAYIAMK AAEDDVNSDP SFLGGSKLRI LMNDAKRSGF LSIIGALKFM ETDVVAIIGP
101: QTSIMAHVLS YIANELKVPM LSFTALDPSL SPLQFPFFVQ TAPSDLFLMR AIAEMITYYG WSDVVALYND DDNSRNGITS LGDELEGRRC KISYKAVLPL
201: DVVITSPREI IDELTKIQGM ESRVIIVHTF PKTGRMIFEE AKKLGMMEQG YVWIATTWLT SLLDSYSPLP PKKIEAIRGV LTLRIHTRES RKRRDFGARW
301: NKLSNGTVGL NVYGLYAYDT VWIIARAVKS LLDSEANITF SSDSKLTSLK GGTLNLGALS IFDQGPQFLE FIVKTKMSGV TGPVQFLPDR SMLQPAYDII
401: NIVGDGFKQI GYWSNHSGLS VIPPESLYSK PPNRSSSNQH LYNVTWPGGT SETPRGWVLP NNGRRLRIGV PNRASFKDFV SSVNGSNKVE GYSIDVFEAA
501: IKLLPYPVAH EFVLFGDGLK NPNYNELVNN VSTGVFDAVV GDIAIVKRRI RIVDFTQPYI ESGLVVVAAV TKLNDTPWAF LRPFTPPMFT FSTMFFSHRE
601: NTVSTLGRVV LLIWLFVVLI ITSSYTASLT SILTVQQLNS PIKGVDTLMS SSERVGFQVG SYAENYMIDE LNIARSRLVA LGSPKEYATA LQNGTVSAIV
701: DERPYVDLFL SEFCGFAIRG QAFTRSGWGF AFPRDSPLAV DMSTAILGLS ETGKLQKIHD KWLSKSNCSN LNGSQSDDDP EQLKLRSFWG LFLLCGIACF
801: IALFIYFFMI VRDFCNHHKK PEEEEATVPS PEGSRSKTLQ TFLAYFDEKE AESNRRLKRK RNDDLSLKSS
Best Arabidopsis Sequence Match ( AT4G35290.4 )
(BLAST)
001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI
Arabidopsis Description
GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.