Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73718 | Canola | plasma membrane | 93.37 | 42.65 |
| CDX78008 | Canola | plasma membrane | 90.91 | 41.53 |
| AT3G51480.1 | Thale cress | plasma membrane | 80.1 | 36.1 |
| CDY68928 | Canola | extracellular, plasma membrane | 38.57 | 29.46 |
| CDY70557 | Canola | extracellular, plasma membrane | 38.33 | 29.27 |
| Zm00001d033769_P001 | Maize | golgi, plasma membrane | 44.23 | 28.53 |
| Os04t0585200-02 | Rice | extracellular | 35.63 | 26.85 |
| CDY35797 | Canola | plasma membrane | 53.07 | 26.28 |
| KRH07800 | Soybean | plasma membrane | 57.25 | 25.44 |
| CDX75490 | Canola | extracellular, plasma membrane, vacuole | 36.36 | 25.43 |
| VIT_07s0031g02170.t01 | Wine grape | plasma membrane | 57.74 | 25.11 |
| KRH39412 | Soybean | plasma membrane | 57.74 | 24.82 |
| Solyc02g082480.2.1 | Tomato | plasma membrane | 56.27 | 23.9 |
| CDX69127 | Canola | plasma membrane | 52.58 | 23.46 |
| CDY24327 | Canola | plasma membrane | 52.58 | 23.46 |
| HORVU0Hr1G018770.1 | Barley | plasma membrane | 46.19 | 23.41 |
| KRH76527 | Soybean | plasma membrane | 53.81 | 23.35 |
| KRH28939 | Soybean | plasma membrane | 53.81 | 23.35 |
| CDY52597 | Canola | plasma membrane | 52.09 | 23.25 |
| CDX76331 | Canola | plasma membrane | 51.6 | 23.08 |
| GSMUA_Achr9P23900_001 | Banana | plasma membrane | 51.35 | 22.77 |
| GSMUA_Achr3P27050_001 | Banana | plasma membrane | 51.11 | 22.73 |
| Zm00001d002532_P003 | Maize | plasma membrane | 51.6 | 22.56 |
| CDY06165 | Canola | plasma membrane | 47.91 | 22.39 |
| TraesCS2B01G477300.4 | Wheat | plasma membrane | 50.37 | 22.31 |
| TraesCS2D01G455600.2 | Wheat | plasma membrane | 50.12 | 22.2 |
| TraesCS2A01G455200.2 | Wheat | plasma membrane | 49.88 | 22.09 |
| KXG26996 | Sorghum | plasma membrane | 50.37 | 21.93 |
| GSMUA_Achr5P19180_001 | Banana | plasma membrane | 47.91 | 21.67 |
| CDY65624 | Canola | plasma membrane | 45.45 | 21.26 |
| HORVU2Hr1G104920.3 | Barley | plasma membrane | 49.63 | 21.26 |
| Zm00001d015007_P003 | Maize | plasma membrane | 46.44 | 20.98 |
| KXG29299 | Sorghum | plasma membrane | 47.67 | 20.95 |
| TraesCS6A01G049000.1 | Wheat | plasma membrane | 47.67 | 20.84 |
| OQU84212 | Sorghum | mitochondrion | 46.44 | 20.79 |
| CDY10044 | Canola | plasma membrane | 47.91 | 20.77 |
| TraesCSU01G107900.1 | Wheat | plasma membrane | 47.17 | 20.73 |
| TraesCS6A01G048800.1 | Wheat | plasma membrane | 46.68 | 20.52 |
| TraesCS6B01G065400.1 | Wheat | plasma membrane | 46.68 | 20.52 |
| TraesCS6B01G065700.1 | Wheat | plasma membrane | 46.44 | 20.48 |
| CDY46839 | Canola | plasma membrane | 47.67 | 20.4 |
| CDY49512 | Canola | plasma membrane | 47.67 | 20.36 |
| TraesCSU01G108000.1 | Wheat | plasma membrane | 46.19 | 20.35 |
| TraesCS6B01G065500.1 | Wheat | plasma membrane | 46.19 | 20.3 |
| HORVU6Hr1G009520.1 | Barley | plasma membrane | 45.95 | 20.19 |
| TraesCSU01G107700.2 | Wheat | plasma membrane | 45.95 | 20.19 |
| Os02t0117500-01 | Rice | plasma membrane | 46.68 | 20.13 |
| TraesCS6A01G048700.1 | Wheat | plasma membrane | 45.7 | 20.09 |
| TraesCS6B01G066200.1 | Wheat | plasma membrane | 45.21 | 19.98 |
| HORVU2Hr1G049510.4 | Barley | plasma membrane | 45.7 | 19.94 |
| HORVU0Hr1G036590.3 | Barley | plasma membrane | 45.7 | 19.94 |
| TraesCS6A01G049900.1 | Wheat | plasma membrane | 45.21 | 19.93 |
| TraesCSU01G108800.1 | Wheat | plasma membrane | 45.21 | 19.93 |
| Zm00001d054016_P004 | Maize | plasma membrane | 45.7 | 19.56 |
| CDY66698 | Canola | plasma membrane | 40.05 | 18.34 |
| CDX84735 | Canola | plasma membrane | 38.57 | 17.68 |
| CDY15337 | Canola | plasma membrane | 38.82 | 17.67 |
| CDY12211 | Canola | plasma membrane | 38.33 | 17.55 |
| CDX84734 | Canola | plasma membrane | 39.8 | 17.49 |
| CDY66699 | Canola | plasma membrane | 39.31 | 17.28 |
| CDX72325 | Canola | plasma membrane | 28.5 | 17.21 |
| CDY48270 | Canola | plasma membrane | 38.08 | 16.81 |
| CDY12210 | Canola | plasma membrane | 37.35 | 16.5 |
| CDY63640 | Canola | cytosol | 21.38 | 16.02 |
| CDY00544 | Canola | plasma membrane | 30.22 | 15.79 |
| CDY54213 | Canola | plasma membrane | 31.7 | 14.51 |
| CDY36173 | Canola | plasma membrane | 28.26 | 14.27 |
| CDY70035 | Canola | cytosol, plasma membrane | 28.26 | 14.22 |
| CDY58212 | Canola | cytosol, plasma membrane | 28.99 | 14.15 |
| CDY56837 | Canola | plasma membrane | 30.71 | 13.62 |
| CDX73196 | Canola | cytosol, peroxisome, plasma membrane | 30.47 | 13.58 |
| CDY51113 | Canola | plasma membrane | 28.5 | 13.5 |
| CDY48271 | Canola | plastid | 24.32 | 13.4 |
| CDX85724 | Canola | plasma membrane | 28.26 | 13.39 |
| CDY45595 | Canola | plasma membrane | 28.26 | 13.37 |
| CDY31756 | Canola | cytosol, peroxisome, plastid | 28.26 | 13.25 |
| CDY31755 | Canola | cytosol | 28.5 | 12.57 |
| CDY39533 | Canola | plasma membrane | 29.98 | 12.56 |
| CDY38574 | Canola | plasma membrane | 29.48 | 12.41 |
| CDY68132 | Canola | plasma membrane | 30.22 | 12.19 |
| CDY13449 | Canola | cytosol | 28.26 | 11.99 |
| CDY31759 | Canola | cytosol, peroxisome, plasma membrane | 11.3 | 9.77 |
| CDY50141 | Canola | plasma membrane | 9.58 | 7.36 |
| CDY72467 | Canola | cytosol | 0.25 | 1.35 |
| CDX75491 | Canola | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
| Os02t0117600-01 | Rice | plastid | 0.0 | 0.0 |
| CDX80728 | Canola | cytosol | 0.0 | 0.0 |
| CDY71348 | Canola | golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.287.70 | MapMan:24.3.9 | Gene3D:3.40.190.10 | Gene3D:3.40.50.2300 | GO:A0A078E8N6 | InterPro:ANF_lig-bd_rcpt |
| EnsemblPlants:CDX95758 | ProteinID:CDX95758 | ProteinID:CDX95758.1 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0004970 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0038023 | EnsemblPlantsGene:GSBRNA2T00101670001 | InterPro:Iontro_rcpt | PFAM:PF00497 | PFAM:PF01094 |
| PANTHER:PTHR43891 | PANTHER:PTHR43891:SF13 | InterPro:Peripla_BP_I | SMART:SM00079 | SUPFAM:SSF53822 | SUPFAM:SSF53850 |
| InterPro:Solute-binding_3/MltF_N | TMHMM:TMhelix | UniParc:UPI0004EE6081 | SEG:seg | : | : |
Description
BnaC03g26390D
Coordinates
chrLK031890:+:1216943..1220072
Molecular Weight (calculated)
44918.9 Da
IEP (calculated)
7.160
GRAVY (calculated)
-0.036
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYAVLGSDS QGISSESEEE EKGKVELCNA PQHLGMMSSG YVWIATNWLS TIIDTNSPPL PNNIQGVIAL RLHTPDSVMK KSFVQRWRNV TNVGLSTYGL
101: YAYDTVWLLA HAIDDHLQRG GNVSFSKSPI IPELRGGNLH LDALKVFDGG NVFLESILKV DRVGLTGRMK FTKDRNLVNP SFDVINVIGT GHRTVGYWSD
201: HLGLSVMPPE ELEKTSSSGQ KLHSVVWPGQ TTQNPRGWVF SNNGRHLRIG VPNRYRFEEV VSVQSNGVIT GFCVDVFVAA LSLLPYAVPY ELVALGNGHD
301: NPSNTELVRL ITAGVFDAGV GDITIITERT KMADFTQPYV ESGLVVVAPV KKLGSNAMAF LRPFTPQMWL IAASSFLIVG AVIWCLEHKH NDDFRGPPRR
401: QVITTFW
101: YAYDTVWLLA HAIDDHLQRG GNVSFSKSPI IPELRGGNLH LDALKVFDGG NVFLESILKV DRVGLTGRMK FTKDRNLVNP SFDVINVIGT GHRTVGYWSD
201: HLGLSVMPPE ELEKTSSSGQ KLHSVVWPGQ TTQNPRGWVF SNNGRHLRIG VPNRYRFEEV VSVQSNGVIT GFCVDVFVAA LSLLPYAVPY ELVALGNGHD
301: NPSNTELVRL ITAGVFDAGV GDITIITERT KMADFTQPYV ESGLVVVAPV KKLGSNAMAF LRPFTPQMWL IAASSFLIVG AVIWCLEHKH NDDFRGPPRR
401: QVITTFW
001: MKWFLLMLII CNAVPLQGLT KIVSARPQVV NIGSVFTFNS LIGKVIKVAM DAAVEDVNAS PSILNTTTLR IIMHDTKYNG FMSIMEPLQF MESETVAIIG
101: PQRSTTARVV AHVATELKIP ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA ALGDRLSEKR CRISYKAALP
201: PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN
301: LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG
401: TGYTTIGYWF NHSGLSVMPA DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI TGFCVDVFIA AINLLPYAVP
501: FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK
601: HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE
701: LNIHVSRLVP LRSPEEYDKA LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI LQLSENGDMQ RIRDKWLLRK
801: ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS
901: RCN
101: PQRSTTARVV AHVATELKIP ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA ALGDRLSEKR CRISYKAALP
201: PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN
301: LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG
401: TGYTTIGYWF NHSGLSVMPA DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI TGFCVDVFIA AINLLPYAVP
501: FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK
601: HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE
701: LNIHVSRLVP LRSPEEYDKA LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI LQLSENGDMQ RIRDKWLLRK
801: ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS
901: RCN
Arabidopsis Description
GLR3.6Glutamate receptor 3.6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W41]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.