Factsheet for TraesCSU01G108800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G066200.1	Wheat	plasma membrane	97.94	98.15
TraesCS6A01G049900.1	Wheat	plasma membrane	97.4	97.4
HORVU2Hr1G049510.4	Barley	plasma membrane	97.18	96.14
HORVU0Hr1G036590.3	Barley	plasma membrane	97.18	96.14
TraesCSU01G107700.2	Wheat	plasma membrane	86.02	85.75
TraesCSU01G107900.1	Wheat	plasma membrane	86.02	85.75
TraesCSU01G108000.1	Wheat	plasma membrane	85.81	85.71
KXG29299	Sorghum	plasma membrane	81.69	81.43
Zm00001d015007_P003	Maize	plasma membrane	78.76	80.69
Os02t0117500-01	Rice	plasma membrane	82.23	80.4
Zm00001d033769_P001	Maize	golgi, plasma membrane	54.82	80.19
Zm00001d054016_P004	Maize	plasma membrane	80.61	78.23
OQU84212	Sorghum	mitochondrion	72.91	74.04
GSMUA_Achr3P27050_001	Banana	plasma membrane	59.59	60.11
GSMUA_Achr9P23900_001	Banana	plasma membrane	59.37	59.7
VIT_18s0122g00990.t01	Wine grape	plasma membrane	55.58	54.93
CDY71348	Canola	golgi, plasma membrane	15.71	54.72
VIT_07s0031g02170.t01	Wine grape	plasma membrane	55.15	54.38
KRH51581	Soybean	plasma membrane	54.6	54.25
KRH60898	Soybean	plasma membrane	54.28	54.16
CDY35797	Canola	plasma membrane	48.0	53.89
Solyc04g082610.2.1	Tomato	plasma membrane	53.74	53.45
VIT_03s0038g03920.t01	Wine grape	plasma membrane	52.98	53.33
PGSC0003DMT400025675	Potato	plasma membrane	53.3	52.85
Bra034931.1-P	Field mustard	plasma membrane	52.98	52.64
KRH39417	Soybean	golgi, plasma membrane, plastid	52.65	52.26
AT1G42540.2	Thale cress	plasma membrane	52.76	52.2
CDX76331	Canola	plasma membrane	50.81	51.54
KRH39414	Soybean	plasma membrane	52.55	51.49
AT4G35290.2	Thale cress	plasma membrane	50.81	51.43
Bra011603.1-P	Field mustard	plasma membrane	50.81	51.37
CDX69127	Canola	plasma membrane	50.7	51.32
KRH07800	Soybean	plasma membrane	50.81	51.2
KRH14012	Soybean	plasma membrane	50.6	51.04
CDY65624	Canola	plasma membrane	48.0	50.92
CDY70557	Canola	extracellular, plasma membrane	29.36	50.84
CDY68928	Canola	extracellular, plasma membrane	29.25	50.66
KRH76527	Soybean	plasma membrane	51.25	50.43
CDY52597	Canola	plasma membrane	49.73	50.33
Solyc02g082480.2.1	Tomato	plasma membrane	52.22	50.31
CDY24327	Canola	plasma membrane	49.51	50.11
KRH28939	Soybean	plasma membrane	50.92	50.11
KRH39412	Soybean	plasma membrane	51.25	49.95
AT2G17260.1	Thale cress	plasma membrane	49.73	49.62
CDX73718	Canola	plasma membrane	47.89	49.61
CDX75491	Canola	cytosol, plasma membrane, plastid	10.94	49.51
CDX78008	Canola	plasma membrane	47.45	49.16
Bra036795.1-P	Field mustard	plasma membrane	47.45	49.16
CDX80728	Canola	cytosol	12.78	48.76
AT3G51480.1	Thale cress	plasma membrane	47.35	48.39
CDX95758	Canola	cytosol	19.93	45.21
CDX75490	Canola	extracellular, plasma membrane, vacuole	28.49	45.19
KRH74102	Soybean	cytosol, nucleus, peroxisome	30.12	42.84
Bra020812.1-P	Field mustard	plasma membrane	42.8	38.95
PGSC0003DMT400038012	Potato	plasma membrane	47.67	35.83
Os02t0117600-01	Rice	plastid	0.43	1.65

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF4
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	EnsemblPlantsGene:TraesCSU01G108800	EnsemblPlants:TraesCSU01G108800.1	TIGR:cd06366	TIGR:cd13686	SEG:seg

Description

No Description!

Coordinates

chrUn:+:94818194..94821746

Molecular Weight (calculated)

102224.0 Da

IEP (calculated)

7.566

GRAVY (calculated)

0.062

Length

923 amino acids

Sequence
(BLAST)

001: MGIAFPMVLV LSLLLYTNGI SKSLAARPPV VNIGSILQLN STTGGVAAIA INAALEDINS DPTVLNGTTL KVETKDTNCF DGFLGMVQAL QFMETDVIAI
101: VGPQCSAIAH IISYVANELR VPLMSFASDA TLSSIQFPFF VRTAPSDLYQ MAAVAAVVDY NHWKIVTAIY VDDDYGRNGI AALDDALTAK RCKISYKIGF
201: PANAKKSELI NLLVSVSYME SRVIILHTGA EPGLKLFSMA NRLNMMGNGY VWIATDWLSA YLDANSSVPA ETISGMQGVL TLRPHIPNSK MKSNLISKWS
301: RQSQKYNHSD LRVNTYGFYV YDSVWTVARA LDAFFDDGGS ISFSNDSRLR DATGGTLHLE AMSIFDKGRK LLEKIRKVNF TGPSGHVQFD ASGDLIHPAY
401: EIINVIGNGM RTIGFWSNYS GLLSTVPPEA LYSKPPNTSL ANQQLYDVIW PGETAQRPRG WVFPSNAKEL KIGIPNRFSF REFVTKDNVT GSMKGYCIDV
501: FTQALALLPY PVTYKFVPFG SGTENPHYDK LIEMVESNEL DGAVGDIAVT MKRTVNADFT QPFIETGLVI LAPVKRHITT SWAFLQPFTL EMWCVTGLFF
601: LVVGVVVWVL EHRINDEFRG SPRQQMITIF WFSFSTLFFA HRENTMSTLG RGVLIIWLFV VLIIQSSYTA SLTSILTVQQ LDTSIKGIDD LKNSDAPVGF
701: QVGSFAQDYM VNELNISRSR LRALGSPKEY AKALELGPKK GGVMAIVDER PYVELFLSTY CKIAVAGSDF TSRGWGFAFP RDSPLQVDLS TAILSLSENG
801: ELQRIHDKWL KTGECAADES EMINSNQLRL ESFWGLFLIC GVACVISLLI YFGIMLRKYM RHEPKKSLRR FISFVDDKEP PKNRKKRSMS LPASSTATAP
901: MTALDVERPA RPVRNGSVID IEG

Best Arabidopsis Sequence Match ( AT4G35290.4 )
(BLAST)

001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI

Arabidopsis Description

GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.