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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78008 Canola plasma membrane 96.97 96.97
CDX95758 Canola cytosol 42.65 93.37
AT3G51480.1 Thale cress plasma membrane 86.87 85.71
VIT_07s0031g02170.t01 Wine grape plasma membrane 63.52 60.47
KRH07800 Soybean plasma membrane 60.27 58.62
KRH39412 Soybean plasma membrane 60.83 57.23
CDY35797 Canola plasma membrane 52.75 57.18
KRH28939 Soybean plasma membrane 58.25 55.33
GSMUA_Achr3P27050_001 Banana plasma membrane 56.79 55.3
KRH76527 Soybean plasma membrane 58.14 55.22
Solyc02g082480.2.1 Tomato plasma membrane 59.37 55.22
GSMUA_Achr5P19180_001 Banana plasma membrane 55.44 54.89
GSMUA_Achr9P23900_001 Banana plasma membrane 56.23 54.58
CDY70557 Canola extracellular, plasma membrane 31.65 52.91
CDY68928 Canola extracellular, plasma membrane 31.65 52.91
CDX80728 Canola cytosol 14.37 52.89
CDX69127 Canola plasma membrane 52.41 51.21
CDX76331 Canola plasma membrane 51.96 50.88
CDY24327 Canola plasma membrane 51.96 50.77
CDY71348 Canola golgi, plasma membrane 15.04 50.57
CDY52597 Canola plasma membrane 51.52 50.33
Zm00001d002532_P003 Maize plasma membrane 52.53 50.27
CDY65624 Canola plasma membrane 49.05 50.23
TraesCS2A01G455200.2 Wheat plasma membrane 51.63 50.05
TraesCS2B01G477300.4 Wheat plasma membrane 51.63 50.05
TraesCS2D01G455600.2 Wheat plasma membrane 51.63 50.05
CDY06165 Canola plasma membrane 48.71 49.83
HORVU0Hr1G018770.1 Barley plasma membrane 44.33 49.19
Zm00001d015007_P003 Maize plasma membrane 49.49 48.95
TraesCSU01G107900.1 Wheat plasma membrane 50.84 48.92
KXG26996 Sorghum plasma membrane 51.18 48.77
TraesCS6A01G049000.1 Wheat plasma membrane 50.84 48.66
TraesCS6A01G048800.1 Wheat plasma membrane 50.51 48.6
TraesCS6B01G065500.1 Wheat plasma membrane 50.51 48.6
KXG29299 Sorghum plasma membrane 50.39 48.49
CDY49512 Canola plasma membrane 51.85 48.48
TraesCS6B01G065700.1 Wheat plasma membrane 50.17 48.43
TraesCSU01G108000.1 Wheat plasma membrane 50.17 48.38
TraesCS6B01G065400.1 Wheat plasma membrane 50.17 48.27
TraesCS6A01G048700.1 Wheat plasma membrane 50.17 48.27
HORVU2Hr1G104920.3 Barley plasma membrane 51.4 48.21
HORVU6Hr1G009520.1 Barley plasma membrane 50.06 48.16
CDY46839 Canola plasma membrane 51.4 48.16
CDY10044 Canola plasma membrane 50.73 48.14
TraesCS6B01G066200.1 Wheat plasma membrane 49.61 47.99
TraesCSU01G108800.1 Wheat plasma membrane 49.61 47.89
TraesCS6A01G049900.1 Wheat plasma membrane 49.61 47.89
TraesCSU01G107700.2 Wheat plasma membrane 49.72 47.84
HORVU0Hr1G036590.3 Barley plasma membrane 49.72 47.48
HORVU2Hr1G049510.4 Barley plasma membrane 49.72 47.48
Os02t0117500-01 Rice plasma membrane 50.28 47.46
CDX75491 Canola cytosol, plasma membrane, plastid 10.77 47.06
Os04t0585200-02 Rice extracellular 28.17 46.48
OQU84212 Sorghum mitochondrion 47.14 46.2
Zm00001d054016_P004 Maize plasma membrane 48.93 45.85
CDX75490 Canola extracellular, plasma membrane, vacuole 29.07 44.5
Zm00001d033769_P001 Maize golgi, plasma membrane 31.31 44.22
CDY48271 Canola plastid 35.47 42.76
CDY66698 Canola plasma membrane 42.65 42.74
CDX84735 Canola plasma membrane 41.86 42.0
CDX84734 Canola plasma membrane 43.32 41.68
CDY15337 Canola plasma membrane 41.75 41.61
CDY48270 Canola plasma membrane 42.87 41.43
CDY66699 Canola plasma membrane 42.87 41.25
CDY12210 Canola plasma membrane 42.09 40.72
CDY12211 Canola plasma membrane 39.39 39.48
CDY31759 Canola cytosol, peroxisome, plasma membrane 16.84 31.85
CDY58212 Canola cytosol, plasma membrane 29.07 31.06
CDY70035 Canola cytosol, plasma membrane 27.95 30.78
CDY31756 Canola cytosol, peroxisome, plastid 29.85 30.65
CDY31755 Canola cytosol 31.31 30.23
CDX72325 Canola plasma membrane 22.56 29.82
CDY50141 Canola plasma membrane 17.62 29.62
CDY00544 Canola plasma membrane 25.59 29.27
CDY51113 Canola plasma membrane 27.72 28.75
CDY54213 Canola plasma membrane 28.62 28.68
CDX85724 Canola plasma membrane 27.5 28.52
CDY39533 Canola plasma membrane 30.75 28.22
CDX73196 Canola cytosol, peroxisome, plasma membrane 28.84 28.15
CDY38574 Canola plasma membrane 30.42 28.02
CDY56837 Canola plasma membrane 28.84 28.0
CDY36173 Canola plasma membrane 24.92 27.54
CDY45595 Canola plasma membrane 26.04 26.98
CDY68132 Canola plasma membrane 29.74 26.26
CDY13449 Canola cytosol 27.16 25.23
CDY63640 Canola cytosol 14.25 23.39
CDY72467 Canola cytosol 0.22 2.7
Os02t0117600-01 Rice plastid 0.0 0.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078CFD8InterPro:ANF_lig-bd_rcpt
EnsemblPlants:CDX73718ProteinID:CDX73718ProteinID:CDX73718.1GO:GO:0003674GO:GO:0004871GO:GO:0004930
GO:GO:0004970GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0007186
GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0038023InterPro:GPCR_3
EnsemblPlantsGene:GSBRNA2T00109316001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00060PFAM:PF00497PFAM:PF01094
PIRSF:PIRSF037090PRINTS:PR00248PANTHER:PTHR43891PANTHER:PTHR43891:SF13InterPro:Peripla_BP_ISMART:SM00079
SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTMInterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EEC8F0
SEG:seg:::::
Description
BnaC08g22850D
Coordinates
chrLK031799:-:2314662..2317912
Molecular Weight (calculated)
99362.3 Da
IEP (calculated)
8.782
GRAVY (calculated)
0.052
Length
891 amino acids
Sequence
(BLAST)
001: MKWLLLLLLL FHAVPLQGQS TNVSPRPQVV NIGSVFTFKS LIGKVIKVAM QAAVDDVNAN PTVLNNTRLN IIMHDTKFNG FMSIMEPLRF MENKTVAIIG
101: PQRPTSARVV SHVATELKIP ILSFTATDPT MSPRQFPFFI RTSQNDLFQM AAIADIVHHY GWREVIAIYG DDDYGQNGVA ALGDKLAEKR CRISYKAALP
201: PEPTRENITN LLIKVALSES RIIVVHAYFI WGLEVFNVAQ HLGMMSSGYV WIATNWLSTI IDTNSPPLPN NIQGVIALRL HTPDSVMKKS FVQRWRNVTN
301: VGLSTYGLYA YDTVWLLAHA IDDHLQRGGN VSFSKSPIIP ELRGGNLHLD ALKVFDGGNT FLESILKVDR VGLTGRMKFT KDRNLVNPAF DVINVIGTGH
401: RTIGYWSDHL GLSVMPPEEL EKTSSSGQKL HSVVWPGQTT QNPRGWVFSN NGRHLRIGVP NRYRFEEVVS VQSNGVITGF CVDVFVAALS LLPYAVPYEL
501: VALGNGHDNP SNTELVRLIT AGVFDAGVGD ITIITERTKM ADFTQPYVES GLVVVAPVKK LGSSAMAFLR PFTPQMWLIA ASSFLIVGAV IWCLEHKHND
601: DFRGPPRRQV ITTFWFSFST LFFSHRETTV SNLGRIVLLL WLFVVLIINS SYTASLTSIL TVHQLSSPIK GIETLETNND PIGYPQGSFV RDYLVNELRI
701: HESRLVPLRS PEEYEKALRD GPGKGGVAAI VDERAYIELF LSNRCEFGIV GQEFTKNGWG FAFPRNSPLA VDVSTAILQL SENGDLQRIR DKWLLRKACS
801: LQGAEIEVDR LELKSFWGLF VVCGLACVVA LAVYIVLMIR KFGRHCPVEA EGSIRRRSSP SASIHSFLSF VKEKEEDVKA RSSRERQLED I
Best Arabidopsis Sequence Match ( AT3G51480.1 )
(BLAST)
001: MKWFLLMLII CNAVPLQGLT KIVSARPQVV NIGSVFTFNS LIGKVIKVAM DAAVEDVNAS PSILNTTTLR IIMHDTKYNG FMSIMEPLQF MESETVAIIG
101: PQRSTTARVV AHVATELKIP ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA ALGDRLSEKR CRISYKAALP
201: PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN
301: LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG
401: TGYTTIGYWF NHSGLSVMPA DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI TGFCVDVFIA AINLLPYAVP
501: FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK
601: HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE
701: LNIHVSRLVP LRSPEEYDKA LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI LQLSENGDMQ RIRDKWLLRK
801: ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS
901: RCN
Arabidopsis Description
GLR3.6Glutamate receptor 3.6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W41]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.