Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63640 | Canola | cytosol | 100.0 | 13.63 |
| CDY13449 | Canola | cytosol | 100.0 | 7.72 |
| CDY70557 | Canola | extracellular, plasma membrane | 2.7 | 0.38 |
| CDY68928 | Canola | extracellular, plasma membrane | 2.7 | 0.38 |
| CDY54213 | Canola | plasma membrane | 4.05 | 0.34 |
| CDY56837 | Canola | plasma membrane | 4.05 | 0.33 |
| CDY00544 | Canola | plasma membrane | 2.7 | 0.26 |
| CDX95758 | Canola | cytosol | 1.35 | 0.25 |
| CDY45595 | Canola | plasma membrane | 2.7 | 0.23 |
| CDX78008 | Canola | plasma membrane | 2.7 | 0.22 |
| CDX73718 | Canola | plasma membrane | 2.7 | 0.22 |
| CDY15337 | Canola | plasma membrane | 2.7 | 0.22 |
| CDY38574 | Canola | plasma membrane | 2.7 | 0.21 |
| CDY68132 | Canola | plasma membrane | 2.7 | 0.2 |
| CDX72325 | Canola | plasma membrane | 1.35 | 0.15 |
| CDY36173 | Canola | plasma membrane | 1.35 | 0.12 |
| CDY70035 | Canola | cytosol, plasma membrane | 1.35 | 0.12 |
| CDY58212 | Canola | cytosol, plasma membrane | 1.35 | 0.12 |
| CDY51113 | Canola | plasma membrane | 1.35 | 0.12 |
| CDX85724 | Canola | plasma membrane | 1.35 | 0.12 |
| CDY31756 | Canola | cytosol, peroxisome, plastid | 1.35 | 0.12 |
| CDY65624 | Canola | plasma membrane | 1.35 | 0.11 |
| CDX84735 | Canola | plasma membrane | 1.35 | 0.11 |
| CDY66698 | Canola | plasma membrane | 1.35 | 0.11 |
| CDX76331 | Canola | plasma membrane | 1.35 | 0.11 |
| CDY24327 | Canola | plasma membrane | 1.35 | 0.11 |
| CDY52597 | Canola | plasma membrane | 1.35 | 0.11 |
| CDX73196 | Canola | cytosol, peroxisome, plasma membrane | 1.35 | 0.11 |
| CDY12210 | Canola | plasma membrane | 1.35 | 0.11 |
| CDY48270 | Canola | plasma membrane | 1.35 | 0.11 |
| CDY31755 | Canola | cytosol | 1.35 | 0.11 |
| CDY66699 | Canola | plasma membrane | 1.35 | 0.11 |
| CDX84734 | Canola | plasma membrane | 1.35 | 0.11 |
| CDY39533 | Canola | plasma membrane | 1.35 | 0.1 |
| CDX80728 | Canola | cytosol | 0.0 | 0.0 |
| Solyc04g078860.2.1 | Tomato | plasma membrane | 0.0 | 0.0 |
| PGSC0003DMT400020569 | Potato | cytosol | 0.0 | 0.0 |
| KRH15368 | Soybean | plasma membrane | 0.0 | 0.0 |
| KRH07014 | Soybean | golgi, plasma membrane | 0.0 | 0.0 |
| KRH07011 | Soybean | plasma membrane | 0.0 | 0.0 |
| KRH07010 | Soybean | mitochondrion | 0.0 | 0.0 |
| KRH05679 | Soybean | plasma membrane | 0.0 | 0.0 |
| CDY71348 | Canola | golgi, plasma membrane | 0.0 | 0.0 |
| CDX75490 | Canola | extracellular, plasma membrane, vacuole | 0.0 | 0.0 |
| CDX75491 | Canola | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
| CDY50141 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY06165 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY10044 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY12211 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY31759 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| CDY35797 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX69127 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY46839 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY48271 | Canola | plastid | 0.0 | 0.0 |
| CDY49512 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY72467 | EnsemblPlantsGene:GSBRNA2T00029923001 | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR015300 | PANTHER:PTHR31674 | PANTHER:PTHR31674:SF5 |
| ProteinID:CDY72467 | ProteinID:CDY72467.1 | SUPFAM:SSF101936 | UniParc:UPI0004EE25C6 | UniProt:A0A078K3I9 | MapMan:35.2 |
Description
BnaCnng77790DBnaCnng77790D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K3I9]
Coordinates
chrLK051216:+:1887..2108
Molecular Weight (calculated)
8295.3 Da
IEP (calculated)
9.754
GRAVY (calculated)
-0.396
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MNINGIKKQN EIILMDKHGV KCVTKLVRDG SKYGKRGLGK GCKDFCEAND VLKIGQPFMS ELVWEDSVPV LRSK
001: MANPLLYSPI NPQFFQPLLP GFTNHLDIPV AFFLKYLVGT NVGKTAELRS DASEMTWKVK IDGRRLSNGW EDFTIAHDLR VGDIVVFRQE GELVFHVTAL
101: GPSCCEIQYG EDTLEEDKIE KLCGTENVSS KKKSLKREAE SAPDNSLDSC FVATVTGSNL KRDTLYIPKE FALSNGLMNK YQIVLMNEEG ESWKIDLRRE
201: AYNYGRFYMR RGWRSFCIAN GKKPGDVFAF KLVKNEETPM IQLFPMTIED LDKLQSLPRH KIRKTEAAPS SPDLSSFVAT VTASNLSRDR LYLPKTFIMS
301: NGLLKKFQMC LMNEEGESWT IDVKHEAHTG RFLTIRGWRR FCVANGKKPG DLLKFKLVHN EETPVLQLLP LNSEDLHKLN PSNDTRHGQS LKVTKKEFLG
401: MEATENEFLG EEVYCNDSFK ASEKDTLPFA EPINEDIRQG QCSQTIKQEY VSTEEKNSTS QNRFVTLTLT HSSKLNLPFE FMKRNGIKKA GKITMVDRYD
501: AKWRTSLLMD KIGTMSLGRG SKGFCEVNGV EMNESFILEL IWEDTVPLLK FCSKV
101: GPSCCEIQYG EDTLEEDKIE KLCGTENVSS KKKSLKREAE SAPDNSLDSC FVATVTGSNL KRDTLYIPKE FALSNGLMNK YQIVLMNEEG ESWKIDLRRE
201: AYNYGRFYMR RGWRSFCIAN GKKPGDVFAF KLVKNEETPM IQLFPMTIED LDKLQSLPRH KIRKTEAAPS SPDLSSFVAT VTASNLSRDR LYLPKTFIMS
301: NGLLKKFQMC LMNEEGESWT IDVKHEAHTG RFLTIRGWRR FCVANGKKPG DLLKFKLVHN EETPVLQLLP LNSEDLHKLN PSNDTRHGQS LKVTKKEFLG
401: MEATENEFLG EEVYCNDSFK ASEKDTLPFA EPINEDIRQG QCSQTIKQEY VSTEEKNSTS QNRFVTLTLT HSSKLNLPFE FMKRNGIKKA GKITMVDRYD
501: AKWRTSLLMD KIGTMSLGRG SKGFCEVNGV EMNESFILEL IWEDTVPLLK FCSKV
Arabidopsis Description
REM10B3 domain-containing protein REM10 [Source:UniProtKB/Swiss-Prot;Acc:P0DH85]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.