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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70557 Canola extracellular, plasma membrane 99.25 99.25
Bra034931.1-P Field mustard plasma membrane 99.81 57.27
CDY35797 Canola plasma membrane 79.55 51.58
AT1G42540.2 Thale cress plasma membrane 88.56 50.59
Os04t0585200-02 Rice extracellular 47.84 47.22
CDX75490 Canola extracellular, plasma membrane, vacuole 47.09 43.13
Zm00001d033769_P001 Maize golgi, plasma membrane 48.78 41.2
CDX95758 Canola cytosol 29.46 38.57
Solyc04g082610.2.1 Tomato plasma membrane 61.54 35.34
PGSC0003DMT400025675 Potato plasma membrane 60.98 34.91
KRH60898 Soybean plasma membrane 60.23 34.7
VIT_18s0122g00990.t01 Wine grape plasma membrane 60.41 34.48
KRH51581 Soybean plasma membrane 59.66 34.23
GSMUA_Achr3P27050_001 Banana plasma membrane 55.91 32.57
GSMUA_Achr5P19180_001 Banana plasma membrane 53.85 31.89
CDX73718 Canola plasma membrane 52.91 31.65
GSMUA_Achr9P23900_001 Banana plasma membrane 54.41 31.59
CDX78008 Canola plasma membrane 52.72 31.54
Zm00001d015007_P003 Maize plasma membrane 51.22 30.3
TraesCS2A01G455200.2 Wheat plasma membrane 50.66 29.38
TraesCSU01G107900.1 Wheat plasma membrane 51.03 29.37
TraesCS6A01G048800.1 Wheat plasma membrane 50.84 29.27
TraesCSU01G108800.1 Wheat plasma membrane 50.66 29.25
TraesCS6B01G065500.1 Wheat plasma membrane 50.66 29.16
TraesCSU01G108000.1 Wheat plasma membrane 50.47 29.11
TraesCS6B01G066200.1 Wheat plasma membrane 50.28 29.1
KXG26996 Sorghum plasma membrane 51.03 29.09
HORVU2Hr1G104920.3 Barley plasma membrane 51.78 29.05
KXG29299 Sorghum plasma membrane 50.47 29.05
Zm00001d002532_P003 Maize plasma membrane 50.66 29.0
TraesCS2D01G455600.2 Wheat plasma membrane 49.91 28.94
CDY65624 Canola plasma membrane 47.09 28.85
TraesCS2B01G477300.4 Wheat plasma membrane 49.72 28.84
HORVU0Hr1G036590.3 Barley plasma membrane 50.47 28.83
HORVU2Hr1G049510.4 Barley plasma membrane 50.47 28.83
OQU84212 Sorghum mitochondrion 49.16 28.82
CDY24327 Canola plasma membrane 48.97 28.62
TraesCS6A01G048700.1 Wheat plasma membrane 49.72 28.62
HORVU6Hr1G009520.1 Barley plasma membrane 49.72 28.62
TraesCS6B01G065700.1 Wheat plasma membrane 49.53 28.6
TraesCS6A01G049900.1 Wheat plasma membrane 49.53 28.6
TraesCS6B01G065400.1 Wheat plasma membrane 49.34 28.4
TraesCS6A01G049000.1 Wheat plasma membrane 49.53 28.36
CDY52597 Canola plasma membrane 48.41 28.29
CDY06165 Canola plasma membrane 46.15 28.24
CDY10044 Canola plasma membrane 49.72 28.22
TraesCSU01G107700.2 Wheat plasma membrane 48.97 28.19
Os02t0117500-01 Rice plasma membrane 49.91 28.18
CDX76331 Canola plasma membrane 47.84 28.02
Zm00001d054016_P004 Maize plasma membrane 49.91 27.97
CDY66698 Canola plasma membrane 46.53 27.9
CDX69127 Canola plasma membrane 47.47 27.74
CDX84735 Canola plasma membrane 46.15 27.7
CDY46839 Canola plasma membrane 49.34 27.66
CDY49512 Canola plasma membrane 48.97 27.39
HORVU0Hr1G018770.1 Barley plasma membrane 39.21 26.03
CDY12211 Canola plasma membrane 40.9 24.52
CDY63640 Canola cytosol 23.83 23.39
CDY48271 Canola plastid 31.71 22.87
CDY48270 Canola plasma membrane 38.46 22.23
CDY12210 Canola plasma membrane 37.9 21.93
CDY15337 Canola plasma membrane 36.77 21.92
CDX84734 Canola plasma membrane 37.71 21.71
CDY66699 Canola plasma membrane 37.52 21.6
CDY54213 Canola plasma membrane 29.46 17.66
CDY00544 Canola plasma membrane 24.95 17.07
CDY45595 Canola plasma membrane 25.52 15.81
CDY36173 Canola plasma membrane 23.64 15.63
CDY56837 Canola plasma membrane 26.83 15.58
CDY13449 Canola cytosol 27.39 15.22
CDY31756 Canola cytosol, peroxisome, plastid 24.77 15.21
CDY31755 Canola cytosol 26.27 15.17
CDX85724 Canola plasma membrane 24.39 15.13
CDY39533 Canola plasma membrane 27.2 14.93
CDY38574 Canola plasma membrane 27.02 14.89
CDX73196 Canola cytosol, peroxisome, plasma membrane 25.14 14.68
CDY70035 Canola cytosol, plasma membrane 22.14 14.59
CDX72325 Canola plasma membrane 18.39 14.54
CDY51113 Canola plasma membrane 23.26 14.44
CDY68132 Canola plasma membrane 27.2 14.37
CDY58212 Canola cytosol, plasma membrane 22.14 14.15
CDY50141 Canola plasma membrane 3.0 3.02
CDY72467 Canola cytosol 0.38 2.7
CDY31759 Canola cytosol, peroxisome, plasma membrane 2.06 2.34
CDX80728 Canola cytosol 0.38 0.83
CDY71348 Canola golgi, plasma membrane 0.38 0.75
CDX75491 Canola cytosol, plasma membrane, plastid 0.19 0.49
Os02t0117600-01 Rice plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY68928EnsemblPlantsGene:GSBRNA2T00081436001Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078JN41GO:GO:0005575
GO:GO:0016020GO:GO:0016021InterPro:ANF_lig-bd_rcptInterPro:Peripla_BP_IPANTHER:PTHR43891PANTHER:PTHR43891:SF8
PFAM:PF01094PRINTS:PR01176ProteinID:CDY68928ProteinID:CDY68928.1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF53822SUPFAM:SSF53850UniParc:UPI0004EF3077UniProt:A0A078JN41MapMan:24.3.9:
Description
BnaA08g29720DBnaA08g29720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JN41]
Coordinates
chrLK038280:+:2695..4725
Molecular Weight (calculated)
59271.3 Da
IEP (calculated)
9.106
GRAVY (calculated)
0.032
Length
533 amino acids
Sequence
(BLAST)
001: MKLLWSFLFL SCLCLGFLGH GHSEKPEVVK IGSIFSFNSV IGRVAKIAIE EAVKDVNSNP DILVGTRLQV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TSQSDLYQME AIASIVDLYG WKEVIAVFVD DDYGRNGVAA LNDKLASRRL RITYKAGLHP
201: DNAVNKNEIM NMLIKIMLLQ PRIIVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST TLDSSSPLPS ERLESIQGAL VLRPHTPDSK LKREFFARWR
301: KNPDAPLALH TYGLYAYDSV MLLARALDKY FKHGGKVSFS NDSMLDALGK SGSLNLEAMT VFDGGEALLK DILGTHMVGL TGQLQFTTDR SRIRPAYDII
401: NVAGTGVRQI GYWSNHSGLS VLPPESLTKP NMSASQKLRH VIWPGEAFQK PRGWAFSNNG KELKIGVPRR VSYKEFVSQI RGTENMFKGF CIDVFTAAVN
501: LLPYAVPVKF IPYGNGKENP SYTHMVEMIT SGV
Best Arabidopsis Sequence Match ( AT1G42540.3 )
(BLAST)
001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHSM SKENLLCHWL LFGF
Arabidopsis Description
GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.