Factsheet for Zm00001d054016_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033769_P001	Maize	golgi, plasma membrane	64.14	96.67
Zm00001d015007_P003	Maize	plasma membrane	88.75	93.67
KXG29299	Sorghum	plasma membrane	90.75	93.2
OQU84212	Sorghum	mitochondrion	78.65	82.29
TraesCSU01G108800.1	Wheat	plasma membrane	78.23	80.61
TraesCS6B01G066200.1	Wheat	plasma membrane	77.92	80.46
TraesCS6A01G049900.1	Wheat	plasma membrane	77.6	79.96
TraesCS6B01G065500.1	Wheat	plasma membrane	77.71	79.81
TraesCS6A01G048800.1	Wheat	plasma membrane	77.71	79.81
TraesCS6B01G065700.1	Wheat	plasma membrane	77.29	79.63
TraesCSU01G107900.1	Wheat	plasma membrane	77.39	79.48
TraesCSU01G108000.1	Wheat	plasma membrane	76.87	79.11
Os02t0117500-01	Rice	plasma membrane	78.44	79.03
HORVU2Hr1G049510.4	Barley	plasma membrane	77.39	78.89
HORVU0Hr1G036590.3	Barley	plasma membrane	77.39	78.89
TraesCS6A01G048700.1	Wheat	plasma membrane	76.76	78.83
TraesCSU01G107700.2	Wheat	plasma membrane	76.55	78.62
HORVU6Hr1G009520.1	Barley	plasma membrane	76.45	78.51
TraesCS6A01G049000.1	Wheat	plasma membrane	76.76	78.41
TraesCS6B01G065400.1	Wheat	plasma membrane	76.24	78.29
HORVU0Hr1G018770.1	Barley	plasma membrane	65.93	78.08
GSMUA_Achr3P27050_001	Banana	plasma membrane	57.41	59.67
GSMUA_Achr9P23900_001	Banana	plasma membrane	57.1	59.15
Zm00001d002532_P003	Maize	plasma membrane	54.47	55.64
KRH60898	Soybean	plasma membrane	52.89	54.38
KRH51581	Soybean	plasma membrane	53.0	54.25
VIT_07s0031g02170.t01	Wine grape	plasma membrane	53.31	54.17
VIT_18s0122g00990.t01	Wine grape	plasma membrane	53.0	53.96
CDY35797	Canola	plasma membrane	45.85	53.04
VIT_03s0038g03920.t01	Wine grape	plasma membrane	51.0	52.89
CDY71348	Canola	golgi, plasma membrane	14.72	52.83
Solyc04g082610.2.1	Tomato	plasma membrane	51.42	52.69
PGSC0003DMT400025675	Potato	plasma membrane	51.0	52.09
Bra034931.1-P	Field mustard	plasma membrane	50.79	51.99
AT1G42540.2	Thale cress	plasma membrane	50.68	51.66
KRH39417	Soybean	golgi, plasma membrane, plastid	50.47	51.61
KRH07800	Soybean	plasma membrane	49.53	51.42
CDX69127	Canola	plasma membrane	48.79	50.88
AT4G35290.2	Thale cress	plasma membrane	48.69	50.77
KRH39414	Soybean	plasma membrane	50.26	50.74
Bra011603.1-P	Field mustard	plasma membrane	48.58	50.6
CDX76331	Canola	plasma membrane	48.05	50.22
KRH14012	Soybean	plasma membrane	48.27	50.16
CDY70557	Canola	extracellular, plasma membrane	28.08	50.09
Solyc02g082480.2.1	Tomato	plasma membrane	50.37	50.0
CDY68928	Canola	extracellular, plasma membrane	27.97	49.91
CDY52597	Canola	plasma membrane	47.84	49.89
CDY65624	Canola	plasma membrane	45.64	49.89
KRH39412	Soybean	plasma membrane	49.63	49.84
CDY24327	Canola	plasma membrane	47.63	49.67
Zm00001d006508_P003	Maize	plasma membrane	47.95	49.4
KRH28939	Soybean	plasma membrane	48.48	49.15
KRH76527	Soybean	plasma membrane	48.48	49.15
AT2G17260.1	Thale cress	plasma membrane	47.74	49.08
CDX73718	Canola	plasma membrane	45.85	48.93
CDX80728	Canola	cytosol	12.41	48.76
Zm00001d018614_P003	Maize	plastid	49.0	48.59
Zm00001d014458_P001	Maize	plasma membrane	47.0	48.59
CDX78008	Canola	plasma membrane	45.32	48.37
Bra036795.1-P	Field mustard	plasma membrane	45.32	48.37
Zm00001d014451_P001	Maize	plasma membrane	47.95	48.15
AT3G51480.1	Thale cress	plasma membrane	45.22	47.62
CDX75491	Canola	cytosol, plasma membrane, plastid	10.2	47.55
Zm00001d018615_P001	Maize	plasma membrane	47.74	47.29
Zm00001d014456_P001	Maize	plasma membrane	44.9	46.16
CDX95758	Canola	cytosol	19.56	45.7
CDX75490	Canola	extracellular, plasma membrane, vacuole	27.34	44.67
KRH74102	Soybean	cytosol, nucleus, peroxisome	29.23	42.84
Bra020812.1-P	Field mustard	plasma membrane	40.48	37.97
PGSC0003DMT400038012	Potato	plasma membrane	46.58	36.07
Zm00001d018332_P001	Maize	plastid	30.49	29.12
Zm00001d020568_P001	Maize	golgi	29.23	28.93
Zm00001d005783_P002	Maize	plasma membrane	29.34	28.62
Zm00001d005782_P001	Maize	plasma membrane	29.44	28.57
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	30.07	28.12
Zm00001d018329_P001	Maize	plasma membrane	29.44	28.0
Zm00001d020563_P001	Maize	plasma membrane	27.02	27.0
Os02t0117600-01	Rice	plastid	0.21	0.83

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	ProteinID:AQK61073.1
ncoils:Coil	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
UniProt:K7UT49	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891
PANTHER:PTHR43891:SF4	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI0002211F62	EnsemblPlantsGene:Zm00001d054016	EnsemblPlants:Zm00001d054016_P004	EnsemblPlants:Zm00001d054016_T004
SEG:seg	:	:	:	:	:

Description

Glutamate receptor 3.3

Coordinates

chr4:-:245187634..245193207

Molecular Weight (calculated)

105386.0 Da

IEP (calculated)

6.915

GRAVY (calculated)

0.060

Length

951 amino acids

Sequence
(BLAST)

001: MRIAFLVLLV LSLFLLPNGI GKSLAARPSV VNIGSILRLN STTGGVSDVA IRAAVEDINS DPTVLNGTTL HVQTRDTNCD DGFLGMVQAL QFMETDVIAI
101: IGPQCSPIAH IISYVANELQ VPLMSFASDA TLSSIQFPFF VRTMPSDLYQ MAAVAAVIDY YQWKIVTAIY VDDDYGRNGI AALDDELTAR RCKISFKIGF
201: RSNAKKSDLL NLLVTVSNME SRVIILHTGS EPGLKLLSLA NGLNMMGNGY VWIATDWLSA YLDANSSVSA ETINGMQGVL TVRPHTPKSK VKSNLVSKWS
301: SLSKKYNHSD LRTSAYGFYV YDSVWTVARA LDAFFDDGGR ISFTNDSRLR DETGGTLHLE AMSVFDMGNK LLNKIRNVNF TGVSGQVQFN AQFELIHPAY
401: DIISIIGNGM RTIGFWSNYT RLLSTVLPED LYSKPPNTSL ANQQLYDVIW PGETAQRPRG WAFPSNAKEL KIGVPNRFSF KDFVSKDNAT GSMKGYCIDV
501: FTQALALLPY PVTYRFIPFG NGTENPHYSQ LVQMVADNVS VDMHFFPPHF IMYSSDKSKL ILQDFDAAIG DIVITMSRTK AVDFTQPFIE SGLVILSPIK
601: KHITNSWAFL QPFTLGMWCV TGLSFLVVGV VIWILEHRIN NDFRGSPRQQ IITIVWFSFS TLFFAHRENT MSTLGRGVLL IWLFVVLIIQ SSYTASLTSI
701: LTVQQLDTSI RGLDDLKNSD YPIGFQVGSF VEEYMIKELN ISQSRLKALG SPEEYAENLK LGPKKGGVMA IVDERPYVEL FLSTYCKIAV AGSDFTSGGW
801: GFAFPRDSPL QIDLSTAILT LSENGELQRI HDKWLKTGDC STDNAEFVDS NQLRLESFMG LFLICGAACV LALLIYLGIT IRQYLRHEQP GPAISVDAGS
901: STSKRSLRKF ISFADDKQPP PKKKRAMSLS RSSMPTMPMS NRPGADIDVE S

Best Arabidopsis Sequence Match ( AT1G42540.1 )
(BLAST)

001: MKQLWTFFFL SFLCSGLFRR THSEKPKVVK IGSIFSFDSV IGKVAKIAID EAVKDVNSNP DILSGTKFSV SMQNSNCSGF MGMVEALRFM EKDIVGIIGP
101: QCSVVAHMIS HMANELRVPL LSFAVTDPVM SPLQFPYFIR TTQSDLYQMD AIASIVDFYG WKEVIAVFVD DDFGRNGVAA LNDKLASRRL RITYKAGLHP
201: DTAVNKNEIM NMLIKIMLLQ PRIVVIHVYS ELGFAVFKEA KYLGMMGNGY VWIATDWLST NLDSSSPLPA ERLETIQGVL VLRPHTPDSD FKREFFKRWR
301: KMSGASLALN TYGLYAYDSV MLLARGLDKF FKDGGNISFS NHSMLNTLGK SGNLNLEAMT VFDGGEALLK DILGTRMVGL TGQLQFTPDR SRTRPAYDII
401: NVAGTGVRQI GYWSNHSGLS TVLPELLYTK EKPNMSTSPK LKHVIWPGET FTKPRGWVFS NNGKELKIGV PLRVSYKEFV SQIRGTENMF KGFCIDVFTA
501: AVNLLPYAVP VKFIPYGNGK ENPSYTHMVE MITTGNFDGV VGDVAIVTNR TKIVDFTQPY AASGLVVVAP FKKLNSGAWA FLRPFNRLMW AVTGCCFLFV
601: GIVVWILEHR TNDEFRGPPK RQCVTILWFS FSTMFFAHRE NTVSTLGRLV LIIWLFVVLI INSSYTASLT SILTVQQLSS PIKGIESLRE RDDPIGYQVG
701: SFAESYLRNE LNISESRLVP LGTPEAYAKA LKDGPSKGGV AAIVDERPYV ELFLSSNCAY RIVGQEFTKS GWGFAFPRDS PLAIDLSTAI LELAENGDLQ
801: RIHDKWLMKN ACTLENAELE SDRLHLKSFW GLFLICGVAC LLALFLYFVQ IIRQLYKKPT DDAIARDQQQ NHDSSSMRST RLQRFLSLMD EKEESKHESK
901: KRKIDGSMND TSGSTRSRGF DRERSFNSVN PLD

Arabidopsis Description

GLR3.3Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.