Factsheet for Bra011603.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75491	Canola	cytosol, plasma membrane, plastid	22.34	100.0
CDX75490	Canola	extracellular, plasma membrane, vacuole	60.24	94.5
AT4G35290.2	Thale cress	plasma membrane	85.32	85.42
Bra020812.1-P	Field mustard	plasma membrane	71.3	64.2
VIT_03s0038g03920.t01	Wine grape	plasma membrane	61.88	61.61
KRH14012	Soybean	plasma membrane	59.69	59.56
GSMUA_Achr9P23900_001	Banana	plasma membrane	55.31	55.01
GSMUA_Achr3P27050_001	Banana	plasma membrane	54.76	54.64
Bra034931.1-P	Field mustard	plasma membrane	54.0	53.07
Bra036795.1-P	Field mustard	plasma membrane	51.26	52.53
GSMUA_Achr5P19180_001	Banana	plasma membrane	51.7	52.44
KRH74102	Soybean	cytosol, nucleus, peroxisome	37.02	52.08
Zm00001d015007_P003	Maize	plasma membrane	51.04	51.72
TraesCS6B01G066200.1	Wheat	plasma membrane	51.59	51.14
Os02t0117500-01	Rice	plasma membrane	52.79	51.06
TraesCS6A01G049900.1	Wheat	plasma membrane	51.48	50.92
TraesCSU01G108800.1	Wheat	plasma membrane	51.37	50.81
TraesCS2A01G455200.2	Wheat	plasma membrane	51.04	50.71
HORVU0Hr1G018770.1	Barley	plasma membrane	44.58	50.68
TraesCS2B01G477300.4	Wheat	plasma membrane	50.82	50.49
TraesCS2D01G455600.2	Wheat	plasma membrane	50.6	50.27
KXG29299	Sorghum	plasma membrane	50.93	50.22
Zm00001d002532_P003	Maize	plasma membrane	51.15	50.16
TraesCS6A01G048700.1	Wheat	plasma membrane	50.71	50.0
TraesCSU01G107900.1	Wheat	plasma membrane	50.71	50.0
HORVU2Hr1G049510.4	Barley	plasma membrane	51.04	49.95
HORVU0Hr1G036590.3	Barley	plasma membrane	51.04	49.95
TraesCS6A01G048800.1	Wheat	plasma membrane	50.6	49.89
TraesCS6B01G065400.1	Wheat	plasma membrane	50.38	49.68
TraesCSU01G107700.2	Wheat	plasma membrane	50.38	49.68
KXG26996	Sorghum	plasma membrane	50.71	49.52
TraesCS6B01G065700.1	Wheat	plasma membrane	50.05	49.51
TraesCS6B01G065500.1	Wheat	plasma membrane	50.16	49.46
HORVU6Hr1G009520.1	Barley	plasma membrane	50.05	49.35
OQU84212	Sorghum	mitochondrion	49.07	49.28
TraesCSU01G108000.1	Wheat	plasma membrane	49.84	49.24
Bra015398.1-P	Field mustard	plasma membrane	51.26	49.21
TraesCS6A01G049000.1	Wheat	plasma membrane	49.95	48.98
HORVU2Hr1G104920.3	Barley	plasma membrane	50.82	48.84
Zm00001d054016_P004	Maize	plasma membrane	50.6	48.58
Bra032480.1-P	Field mustard	plasma membrane	50.27	47.76
Bra005589.1-P	Field mustard	plasma membrane	49.29	47.62
Zm00001d033769_P001	Maize	golgi, plasma membrane	32.86	47.54
Os04t0585200-02	Rice	extracellular	28.04	47.41
PGSC0003DMT400038012	Potato	plasma membrane	57.17	42.51
Bra005591.1-P	Field mustard	plasma membrane	41.18	40.78
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.02	33.9
Bra032072.1-P	Field mustard	plasma membrane	30.45	31.03
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	31.33	30.62
Bra040760.1-P	Field mustard	cytosol	28.15	30.52
Bra040761.1-P	Field mustard	cytosol	30.56	29.97
Bra032063.1-P	Field mustard	plasma membrane	29.35	29.04
Bra023313.1-P	Field mustard	plasma membrane	26.07	27.71
Bra015817.1-P	Field mustard	plasma membrane	27.93	25.27
Bra023989.1-P	Field mustard	cytosol	26.07	24.16
Bra022887.1-P	Field mustard	plasma membrane	42.28	20.79
Os02t0117600-01	Rice	plastid	0.11	0.41

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	EnsemblPlantsGene:Bra011603
EnsemblPlants:Bra011603.1	EnsemblPlants:Bra011603.1-P	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	UniProt:M4D546	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PANTHER:PTHR43891	PANTHER:PTHR43891:SF18	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850
SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000254712F	SEG:seg	:

Description

AT4G35290 (E=0.0) GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | GLUR2 (GLUTAMATE RECEPTOR 2); intracellular ligand-gated ion channel

Coordinates

chrA01:-:1449556..1453100

Molecular Weight (calculated)

101406.0 Da

IEP (calculated)

8.239

GRAVY (calculated)

0.059

Length

913 amino acids

Sequence
(BLAST)

001: MFWVLALLSS FIVLSGDVIV LSEGASSRPH HINVGAIFSL STLYGQVADI AMKAAEDDVN SDPTFLNGSK LRILMYDAKR NGFLSIMKAL QFMETDSVAI
101: IGPQTSIMAH VLSYLGNELN VPMCSFTALD PTLSPLQFPF FVQTAPSDLF LMRAVAEMIT YYGWSDVIAL YNDDDNSRNG VTSLGDELEG RRCKISYKAV
201: LPLDVVIGSP REIVDELVKI QGMESRVIIV NTFPKTGRMI FKEAKRLGMM GRGYVWIATT WMTSLLDSAN PLSLPKVAKS LTGVLTLRIH TPESRKKRDF
301: AARWKKLSNG TVGLNVYGLY AYDTVWIIAR AVKSLLDSGA NISFSSDSRL NHLKGGTLNL AALSMFDQGQ QFLDYIVETK MSGVTGPVEF LPDRSMIQPA
401: YDIINVVGDG LRQIGYWSNH SGLSVIPPEL LFSKPSNRSS SNQHLKNVTW PGGGSVTPRG WVFPDNGRRL RIGVPNRASF KDFVSKVNGS NQIDGYSINV
501: FEAAVKLLSY PVPHEFVLFG DGLKNPNYND LVNNLTTGVF DAVVGDIAIV TKRTRIVDFT QPYIESGLVV VAPVTKLNDT PWAFLRPFTP PMWAVTAAFF
601: LIVGSVIWIL EHRINDEFRG PPRRQIVTIL WFSFSTMFFS HRENTVSTLG RIVLLIWLFV VLIITSSYTA SLTSILTVQQ LNSPIKGVDT LISSSGRVGF
701: QVGSYAENYM IDELNIARSR LVALGSPKEY ATALQNGTVA AIVDERPYVD LFLSEFCGFA IRGQEFTRSG WGFAFPRDSP LAVDMSTAIL GLSEAGKLQK
801: IHDKWLSKSN CSNVNGSASD DDPEQLKLRS FWGLFLLCGI ACFIALFIYF FMIVRDFCNH HKKPEEEEAT VPSPEVSRSK TLQTFLAYFD EKEAESSRRL
901: KRKRNDDLSL KSS

Best Arabidopsis Sequence Match ( AT4G35290.4 )
(BLAST)

001: MFWVLVLLSF IVLIGDGMIS EGAGLRPRYV DVGAIFSLGT LQGEVTNIAM KAAEEDVNSD PSFLGGSKLR ITTYDAKRNG FLTIMGALQF METDAVAIIG
101: PQTSIMAHVL SHLANELSVP MLSFTALDPS LSALQFPFFV QTAPSDLFLM RAIAEMISYY GWSEVIALYN DDDNSRNGIT ALGDELEGRR CKISYKAVLP
201: LDVVITSPRE IINELVKIQG MESRVIIVNT FPKTGKKIFE EAQKLGMMEK GYVWIATTWL TSLLDSVNPL PAKTAESLRG VLTLRIHTPN SKKKKDFVAR
301: WNKLSNGTVG LNVYGLYAYD TVWIIARAVK RLLDSRANIS FSSDPKLTSM KGGGSLNLGA LSIFDQGSQF LDYIVNTNMT GVTGQIQFLP DRSMIQPSYD
401: IINVVDDGFR QIGYWSNHSG LSIIPPESLY KKLSNRSSSN QHLNNVTWPG GTSETPRGWV FPNNGRRLRI GVPDRASFKE FVSRLDGSNK VQGYAIDVFE
501: AAVKLISYPV PHEFVLFGDG LKNPNFNEFV NNVTIGVFDA VVGDIAIVTK RTRIVDFTQP YIESGLVVVA PVTKLNDTPW AFLRPFTPPM WAVTAAFFLI
601: VGSVIWILEH RINDEFRGPP RKQIVTILWF SFSTMFFSHR ENTVSTLGRA VLLIWLFVVL IITSSYTASL TSILTVQQLN SPIRGVDTLI SSSGRVGFQV
701: GSYAENYMID ELNIARSRLV PLGSPKEYAA ALQNGTVAAI VDERPYVDLF LSEFCGFAIR GQEFTRSGWG FAFPRDSPLA IDMSTAILGL SETGQLQKIH
801: DKWLSRSNCS NLNGSVSDED SEQLKLRSFW GLFLVCGISC FIALFIYFFK IVRDFFRHGK YDEEATVPSP ESSRSKSLQT FLAYFDEKED ESKRRMKRKR
901: NDDLSLKPSR PI

Arabidopsis Description

GLR3.2Glutamate receptor 3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q93YT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.