Factsheet for Bra005591.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
golgi 4
plasma membrane 8
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48270	Canola	plasma membrane	98.59	98.59
AT2G32400.1	Thale cress	plasma membrane	86.66	86.75
VIT_12s0059g02260.t01	Wine grape	plasma membrane	54.66	55.45
KRH26791	Soybean	plasma membrane	53.9	54.68
KRH22563	Soybean	plasma membrane	53.47	54.24
Solyc07g052390.2.1	Tomato	nucleus	49.02	52.13
PGSC0003DMT400065543	Potato	plasma membrane	50.76	51.43
GSMUA_Achr5P00740_001	Banana	plasma membrane	47.29	50.76
Bra022887.1-P	Field mustard	plasma membrane	87.2	43.3
Bra036795.1-P	Field mustard	plasma membrane	41.21	42.65
Bra015398.1-P	Field mustard	plasma membrane	43.49	42.17
Bra034931.1-P	Field mustard	plasma membrane	42.19	41.87
Bra005589.1-P	Field mustard	plasma membrane	42.84	41.8
Bra032480.1-P	Field mustard	plasma membrane	42.95	41.21
Bra011603.1-P	Field mustard	plasma membrane	40.78	41.18
Bra020812.1-P	Field mustard	plasma membrane	34.71	31.56
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.17	31.37
Bra032072.1-P	Field mustard	plasma membrane	29.18	30.02
Bra032063.1-P	Field mustard	plasma membrane	29.28	29.25
Bra023313.1-P	Field mustard	plasma membrane	26.79	28.75
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.96	28.59
Bra040760.1-P	Field mustard	cytosol	26.03	28.5
Bra040761.1-P	Field mustard	cytosol	27.77	27.5
Bra015817.1-P	Field mustard	plasma membrane	27.98	25.57
Bra023989.1-P	Field mustard	cytosol	26.46	24.77

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	EnsemblPlantsGene:Bra005591
EnsemblPlants:Bra005591.1	EnsemblPlants:Bra005591.1-P	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	UniProt:M4CN03	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF15	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI00025476CE	SEG:seg

Description

AT2G32400 (E=0.0) GLR5, GLR3.7, ATGLR3.7 | GLR5 (GLUTAMATE RECEPTOR 5); intracellular ligand-gated ion channel

Coordinates

chrA05:-:6394658..6398235

Molecular Weight (calculated)

102922.0 Da

IEP (calculated)

7.641

GRAVY (calculated)

0.078

Length

922 amino acids

Sequence
(BLAST)

001: MGFGIDSSVA ITVLIVAILV VPMGCQRPQV VNLGAVFTFD SVIGRAAKVA LEAAVSDVNA DTSVLKDTEL RLLMKDSSCN VFHGSFGAFE VLEKEVVAMV
101: GPLSSSVAHT LTDIAKGLQF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSAIVDLISF HGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDDTSIA NALNKSKSLG PRVYILHFGP DPSLRIFSIA QKLQMMTNEY VWLATDWLAV TLDSSVSDNS TLKRLEGVVG LRQHIPESVK MHQFTHKMNS
301: NKSMNAYAFH AYDTVWMIAY GIEKMLNDGV NITFSYSEKL IQAQGAKLHL ERVKIFNSGK LLLEKLLQVN FTGIAGQVQF GSGRNVIGCD YDIINVDRTG
401: VHTVGFWSKH GGFSVVAPET RHTRKKSGFA FEEKLGNITW PGGGREKPRG WVIADVANPL KIVIPKRVSF VEFVTEENNS SHRIKGLCID IFTEALKFVP
501: YSVPYIFESF GDGRSSPNYN QMIQMVADGV YDAAVGDIAI VPTRSKLVDF SQPYASTGLV VVIPANDDNA TWIFLRPFTI GLWCVVIASF FCIAIVIWIL
601: EHRINEDFRG PPRRQLITMI LFSFSTLFKR NQEDTISNLA RLVMIVWLFL LMVLTASYTA NLTSILTVQQ LPSAITGIDS LRASEVPVGY QSGTFTLEYL
701: TYSLGMARSR LVPLESTEEY ERALKLGPTA FGGVAAIVDE LPYIEGFLAE RPGFKIVGEP FMHRGWGFAF KRDSPLAIDM STAILKLAET RKLQEIRERW
801: LCNTSCAEKS NWNPEPNQLH LKSFKGLYLV CIAITVSAFL VFVLRMIRQF VRYRRMERTS SLPLASWSSS PSMRLRELVF GFVEFVDEKE EAIKRMFRRS
901: DDSSNNPSHV VEVQADSEVR QI

Best Arabidopsis Sequence Match ( AT2G32400.1 )
(BLAST)

001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N

Arabidopsis Description

GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.