Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065543 | Potato | plasma membrane | 95.85 | 91.32 |
| VIT_12s0059g02260.t01 | Wine grape | plasma membrane | 64.94 | 61.94 |
| KRH22563 | Soybean | plasma membrane | 60.78 | 57.98 |
| KRH26791 | Soybean | plasma membrane | 59.86 | 57.1 |
| GSMUA_Achr5P00740_001 | Banana | plasma membrane | 54.21 | 54.71 |
| AT2G32400.1 | Thale cress | plasma membrane | 53.63 | 50.49 |
| Bra005591.1-P | Field mustard | plasma membrane | 52.13 | 49.02 |
| CDY12210 | Canola | plasma membrane | 52.02 | 48.97 |
| CDY15337 | Canola | plasma membrane | 50.4 | 48.88 |
| CDY48270 | Canola | plasma membrane | 51.9 | 48.81 |
| Solyc05g045650.2.1 | Tomato | plasma membrane | 49.25 | 48.69 |
| CDY66699 | Canola | plasma membrane | 51.44 | 48.16 |
| CDX84734 | Canola | plasma membrane | 51.33 | 48.06 |
| Solyc07g052400.2.1 | Tomato | cytosol | 43.48 | 46.49 |
| Solyc04g082610.2.1 | Tomato | plasma membrane | 49.48 | 46.23 |
| Solyc02g082480.2.1 | Tomato | plasma membrane | 48.9 | 44.26 |
| Solyc06g063170.2.1 | Tomato | cytosol | 32.18 | 30.53 |
| Solyc08g006500.2.1 | Tomato | extracellular | 33.45 | 29.87 |
| Solyc06g063200.1.1 | Tomato | plasma membrane | 32.41 | 28.76 |
| Solyc06g063190.2.1 | Tomato | plasma membrane | 32.3 | 28.34 |
| Solyc06g063210.2.1 | Tomato | mitochondrion, plasma membrane | 30.22 | 26.93 |
| Solyc06g063180.1.1 | Tomato | plasma membrane | 29.87 | 26.73 |
| Solyc02g077290.1.1 | Tomato | nucleus | 28.37 | 26.59 |
| Solyc04g078860.2.1 | Tomato | plasma membrane | 25.03 | 25.8 |
| Bra022887.1-P | Field mustard | plasma membrane | 51.67 | 24.12 |
Protein Annotations
| Gene3D:1.10.287.70 | MapMan:24.3.9 | Gene3D:3.40.190.10 | Gene3D:3.40.50.2300 | InterPro:ANF_lig-bd_rcpt | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0004871 | GO:GO:0004970 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006811 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035235 | GO:GO:0038023 | InterPro:Iontro_rcpt | InterPro:Iontropic_Glu_rcpt_pln |
| UniProt:K4CFD8 | PFAM:PF00060 | PFAM:PF00497 | PFAM:PF01094 | PIRSF:PIRSF037090 | PRINTS:PR01176 |
| PANTHER:PTHR43891 | PANTHER:PTHR43891:SF15 | InterPro:Peripla_BP_I | SMART:SM00079 | SUPFAM:SSF53822 | SUPFAM:SSF53850 |
| InterPro:Solute-binding_3/MltF_N | EnsemblPlantsGene:Solyc07g052390.2 | EnsemblPlants:Solyc07g052390.2.1 | TMHMM:TMhelix | UniParc:UPI000276B81F | SEG:seg |
Description
Glutamate receptor 3.7 [Source:Projected from Arabidopsis thaliana (AT2G32400) UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
Coordinates
chr7:+:60903513..60908262
Molecular Weight (calculated)
96839.7 Da
IEP (calculated)
7.658
GRAVY (calculated)
0.048
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAVKKAME LAVSDINGDP SILNGTSLNL IMEDSECSVF KGSIGALQVT EKQVVAIIGP QSSAIAHMIS FISNGLHVPL ISYAATDPTL SSLQFPFFLR
101: TTQSDQSQME AVADIVYFYE WKEVIAIFLD DDYGRNGIAA LNDALTNKML KISYKLPLPI NYDITDIMYV LNQSKSLGPR VFVVHINPDS QLRFFNAVHK
201: LKMNGSNYVW LMTDWFSTTL DSFSPKNRSL LSTLEGVVSL RPYIPQSAQK RAFLSRWRKL LQNELVHSGL TAYGLYAYDT VWVVARSIDN LLQQGGNISF
301: SLSNMLNGTT SDKLQLGKLK EFDGGGLLMN ILSLTNFTGL TGKIHFSQDR NLIGSGYEVI NIVKQEIHIV GYWSNFSGLS VLPPKPLQNK ETAVTNLNQN
401: LKSVSWPGGK SETPRGWVIA NDERPLRIGF PRRASFTEFV TLNASHNVQG YCIDLFYEAR KLVPYDIPFT FVPFGSGLAN PDYNAFVNMV ATDVFDAAIG
501: DIAIVTNRTR MVDFTQPYVS TGLVIVAPID TSESSAWVFL KPFTLEMWGV TALSFLIIAV VIWILEHRVN EDFRGPPKRQ ITTMFLFSFS TLFKTNQENT
601: VSTLGRMVMV VWLFLLLVIT SSYTASLTSI LTVQQLSSPI TGIDSLIASN SLIGYQVGSF AYSYLKDILN IAPSRLKSLR SPEEFEAALR QGLGNGGVMA
701: IVDELPYMEL FLQNRTDFGI IGRPFTKSGW GFAFKKDSPL ANDMSTAILK LAESGKLQEI HEKWFCQLGC PTDRRKDSVP DQLHLSSFWA LYLLSGAVTV
801: LALLIFLLKS IRQYIRYKRN HTDLSSPSNT RCSHVIYSFF DFIDEKEEAI KRIFAQQDNA QPQTNGS
101: TTQSDQSQME AVADIVYFYE WKEVIAIFLD DDYGRNGIAA LNDALTNKML KISYKLPLPI NYDITDIMYV LNQSKSLGPR VFVVHINPDS QLRFFNAVHK
201: LKMNGSNYVW LMTDWFSTTL DSFSPKNRSL LSTLEGVVSL RPYIPQSAQK RAFLSRWRKL LQNELVHSGL TAYGLYAYDT VWVVARSIDN LLQQGGNISF
301: SLSNMLNGTT SDKLQLGKLK EFDGGGLLMN ILSLTNFTGL TGKIHFSQDR NLIGSGYEVI NIVKQEIHIV GYWSNFSGLS VLPPKPLQNK ETAVTNLNQN
401: LKSVSWPGGK SETPRGWVIA NDERPLRIGF PRRASFTEFV TLNASHNVQG YCIDLFYEAR KLVPYDIPFT FVPFGSGLAN PDYNAFVNMV ATDVFDAAIG
501: DIAIVTNRTR MVDFTQPYVS TGLVIVAPID TSESSAWVFL KPFTLEMWGV TALSFLIIAV VIWILEHRVN EDFRGPPKRQ ITTMFLFSFS TLFKTNQENT
601: VSTLGRMVMV VWLFLLLVIT SSYTASLTSI LTVQQLSSPI TGIDSLIASN SLIGYQVGSF AYSYLKDILN IAPSRLKSLR SPEEFEAALR QGLGNGGVMA
701: IVDELPYMEL FLQNRTDFGI IGRPFTKSGW GFAFKKDSPL ANDMSTAILK LAESGKLQEI HEKWFCQLGC PTDRRKDSVP DQLHLSSFWA LYLLSGAVTV
801: LALLIFLLKS IRQYIRYKRN HTDLSSPSNT RCSHVIYSFF DFIDEKEEAI KRIFAQQDNA QPQTNGS
001: MGLGIDPSVA ITALIVVILV VPMDCQRPQL VNIGAVFAFD SVIGRAAKVA LEAAVSDVNN DKSFLKETEL RLLMEDSACN VFRGSFGAFE LLEKEVVAMI
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N
101: GPISSSVAHT ISDIAKGLHF PLVSFAATDP TLSALQFPFF LRTTPNDAHQ MSALVDLINF YGWKEVISVY SDDELGRNGV SALDDELYKK RSRISYKVPL
201: SVHSDEKFLT NALNKSKSIG PRVYILHFGP DPLLRIFDIA QKLQMMTHEY VWLATDWLSV TLDSLSDKGT LKRLEGVVGL RQHIPESVKM EHFTHKLQSN
301: RSMNAYALHA YDTVWMIAHG IEELLNEGIN ITFSYSEKLL HARGTKLHLE KIKFFNSGEL LLEKLLKVNF TGIAGQVQFG SGRNVIGCDY EIINVNKTDV
401: HTVGFWSKNG GFSVVAPKTR HSQKKTSFVS DEKLGDITWP GGGREKPRGW VIADSADPLK IVVPRRVSFV EFVTEEKNSS HRIQGFCIDV FIEALKFVPY
501: SVPYIFEPFG NGHSSPNYNH LIQMVTDGVY DAAVGDIAIV PSRSKLVDFS QPYASTGLVV VIPANDDNAT WIFLRPFTSR LWCVVLVSFL VIAVVIWILE
601: HRINEDFRGP PRRQLSTMLL FSFSTLFKRN QEDTISNLAR LVMIVWLFLL MVLTASYTAN LTSILTVQQL PSAITGIDSL RASEVPIGYQ AGTFTLEYLT
701: YSLGMARSRL VPLDSTEEYE KALKLGPTNW GGVAAIVDEL PYIELFLAER TGFKIVGEPF MHRGWGFAFK RDSPLAIDMS TAILKLSETR KLQEIRKKWL
801: CKTNCAGKSN WNPEPNQLHL KSFKGLYLVC IAITVSAFLV FVLRMIRQFV RYRRMERTSS MPRASWSASP TLRLRELVFD FVEFVDEKEE AIKRMFRRSD
901: DSNNNPSHVG EVQADTEVPR N
Arabidopsis Description
GLR3.7Glutamate receptor 3.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDQ4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.