Factsheet for Solyc02g082480.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g02170.t01	Wine grape	plasma membrane	65.55	67.09
KRH07800	Soybean	plasma membrane	60.65	63.43
KRH39412	Soybean	plasma membrane	61.38	62.09
KRH76527	Soybean	plasma membrane	59.08	60.34
KRH28939	Soybean	plasma membrane	58.98	60.23
Bra036795.1-P	Field mustard	plasma membrane	55.43	59.6
CDX78008	Canola	plasma membrane	55.43	59.6
CDX73718	Canola	plasma membrane	55.22	59.37
Solyc04g082610.2.1	Tomato	plasma membrane	57.31	59.16
AT3G51480.1	Thale cress	plasma membrane	55.43	58.8
GSMUA_Achr3P27050_001	Banana	plasma membrane	55.64	58.25
GSMUA_Achr5P19180_001	Banana	plasma membrane	54.49	58.0
GSMUA_Achr9P23900_001	Banana	plasma membrane	55.43	57.84
CDX95758	Canola	cytosol	23.9	56.27
Solyc07g052400.2.1	Tomato	cytosol	47.18	55.73
Solyc05g045650.2.1	Tomato	plasma membrane	50.84	55.53
TraesCS2D01G455600.2	Wheat	plasma membrane	51.98	54.19
TraesCS2B01G477300.4	Wheat	plasma membrane	51.88	54.08
TraesCS2A01G455200.2	Wheat	plasma membrane	51.77	53.97
Zm00001d015007_P003	Maize	plasma membrane	50.31	53.5
TraesCS6A01G049900.1	Wheat	plasma membrane	50.84	52.76
Zm00001d002532_P003	Maize	plasma membrane	51.25	52.74
KXG26996	Sorghum	plasma membrane	51.46	52.73
TraesCS6B01G066200.1	Wheat	plasma membrane	50.52	52.55
Os02t0117500-01	Rice	plasma membrane	51.46	52.22
TraesCSU01G108800.1	Wheat	plasma membrane	50.31	52.22
HORVU2Hr1G104920.3	Barley	plasma membrane	51.46	51.89
HORVU0Hr1G018770.1	Barley	plasma membrane	43.42	51.81
TraesCS6B01G065700.1	Wheat	plasma membrane	49.9	51.79
HORVU0Hr1G036590.3	Barley	plasma membrane	50.42	51.77
HORVU2Hr1G049510.4	Barley	plasma membrane	50.42	51.77
KXG29299	Sorghum	plasma membrane	50.0	51.73
TraesCS6A01G048800.1	Wheat	plasma membrane	49.9	51.62
TraesCS6A01G049000.1	Wheat	plasma membrane	50.1	51.56
TraesCSU01G108000.1	Wheat	plasma membrane	49.58	51.41
TraesCSU01G107900.1	Wheat	plasma membrane	49.69	51.4
TraesCSU01G107700.2	Wheat	plasma membrane	49.58	51.3
TraesCS6A01G048700.1	Wheat	plasma membrane	49.58	51.3
TraesCS6B01G065400.1	Wheat	plasma membrane	49.58	51.3
HORVU6Hr1G009520.1	Barley	plasma membrane	49.37	51.08
TraesCS6B01G065500.1	Wheat	plasma membrane	49.27	50.97
OQU84212	Sorghum	mitochondrion	48.33	50.94
Zm00001d054016_P004	Maize	plasma membrane	50.0	50.37
Zm00001d033769_P001	Maize	golgi, plasma membrane	32.99	50.08
Solyc07g052390.2.1	Tomato	nucleus	44.26	48.9
Os04t0585200-02	Rice	extracellular	27.04	47.96
Solyc06g063170.2.1	Tomato	cytosol	30.48	31.95
Solyc08g006500.2.1	Tomato	extracellular	31.52	31.1
Solyc06g063200.1.1	Tomato	plasma membrane	30.79	30.19
Solyc06g063190.2.1	Tomato	plasma membrane	30.27	29.35
Solyc06g063180.1.1	Tomato	plasma membrane	29.33	29.0
Solyc06g063210.2.1	Tomato	mitochondrion, plasma membrane	29.02	28.57
Solyc02g077290.1.1	Tomato	nucleus	26.41	27.35
Solyc04g078860.2.1	Tomato	plasma membrane	23.59	26.87
Os02t0117600-01	Rice	plastid	0.1	0.41

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	InterPro:ANF_lig-bd_rcpt	ProteinID:BAL15058.1
ncoils:Coil	UniProt:G5EKP3	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007267	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611	GO:GO:0009719
GO:GO:0009864	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023
InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PRINTS:PR01176	PANTHER:PTHR43891	PANTHER:PTHR43891:SF13	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	EnsemblPlantsGene:Solyc02g082480.2	EnsemblPlants:Solyc02g082480.2.1	TMHMM:TMhelix	UniParc:UPI0002385741
SEG:seg	:	:	:	:	:

Description

Glutamate receptor 3.6 [Source:Projected from Arabidopsis thaliana (AT3G51480) UniProtKB/Swiss-Prot;Acc:Q84W41]

Coordinates

chr2:-:46181841..46186606

Molecular Weight (calculated)

106684.0 Da

IEP (calculated)

7.836

GRAVY (calculated)

0.010

Length

958 amino acids

Sequence
(BLAST)

001: MKYGSFQTLV SRLHIFVPKF TMRLFWTIIL VVLYNGCSSE GVNSTLSARP KVVNIGCMVS FNTLVGKVTK VAAEAAVEDI NSNPDVLGGT KLNMITLDSN
101: ASGFLGIVEA IRFMETDTMA IVGPQSSVIA HVVSNIANEL QVPLLSFAAT DPSLSSLQYP FFVRTSPSDK YQMEAIAEMV EYYEWREVIA IYIDDDFGRN
201: GIAALADQLA KRRCSISYKA AMRPGATLDD ARDALVQVAL RESRIMVVHT YPTKGLEIFS MARYLGMIDK GYVWIATNWL STILDAGSPL PSDEKENLEG
301: AITLRIHTPG SELKQKFVSR WSNLTRKAGL AGSSRMSTYA LYAYDTVWLL ARAINEFFNQ GGKVSFSKDP RLTELNSGSM NLDSMSIFNG GKLLRDNIFK
401: VNMTGVTGPF SFTSEKELFR PTFEVINVVG TGFRKVGYWS EYSGLSIVPP ETLYSKPPNR SSSNQQLQSI IWPGQITEKP RGWVFPNNGR QLKIGVPNRA
501: SFREFVGKVP GVDSFRGYCI EVFTTAIDLL PYALPYKLVA FGDGHNNPDD TELIRLITAG VYDAAIGDIA ITTNRTKMVD FTQPYIESGL VVVAPVKEQN
601: SNAWAFLSPF TPKMWCVTGV FFLIVGTVIW ILEHRLNDEF RGPPSKQIVT VLWFSFSTLF TAQRENTVST FGRIVLLIWL FVVLIINSSY TASLTSILTV
701: QKLSSPITGI ESLVNTKEPI GYQWGSFARN YLIQELRIDE SRLVPLNLPE DYAKALKDGP SRGGVAAVVD ERAYMELFLS SRCQFSILGQ EFTKNGWGFA
801: FPRDSPLAVD MSTAILKLSE NGELQRIHDK WLSGIACTSQ STKLEVDRLQ LKSFSGLFFL CGLACFLALL IYFVMLACQY CQYYPNSEVA SESSRSGRLQ
901: TFLSFADEKE ESVRSRSKRR QLEVTSVRSI DQDASVNGSR TDRSEIYSNR VVSFGESV

Best Arabidopsis Sequence Match ( AT3G51480.1 )
(BLAST)

001: MKWFLLMLII CNAVPLQGLT KIVSARPQVV NIGSVFTFNS LIGKVIKVAM DAAVEDVNAS PSILNTTTLR IIMHDTKYNG FMSIMEPLQF MESETVAIIG
101: PQRSTTARVV AHVATELKIP ILSFSATDPT MSPLQFPFFI RTSQNDLFQM AAIADIVQFY GWREVVAIYG DDDYGRNGVA ALGDRLSEKR CRISYKAALP
201: PAPTRENITD LLIKVALSES RIIVVHASFI WGLELFNVAR NLGMMSTGYV WIATNWLSTI IDTDSPLPLD TINNIQGVIT LRLHTPNSIM KQNFVQRWHN
301: LTHVGLSTYA LYAYDTVWLL AQAIDDFFKK GGNVSFSKNP IISELGGGNL HLDALKVFDG GKIFLESILQ VDRIGLTGRM KFTSDRNLVN PAFDVLNVIG
401: TGYTTIGYWF NHSGLSVMPA DEMENTSFSG QKLHSVVWPG HSIKIPRGWV FSNNGRHLRI GVPNRYRFEE VVSVKSNGMI TGFCVDVFIA AINLLPYAVP
501: FELVAFGNGH DNPSNSELVR LITTGVYDAG VGDITIITER TKMADFTQPY VESGLVVVAP VRKLGSSAMA FLRPFTPQMW LIAAASFLIV GAVIWCLEHK
601: HNDEFRGPPR RQVITTFWFS FSTLFFSHRE TTTSNLGRIV LIIWLFVVLI INSSYTASLT SILTVHQLSS PIKGIETLQT NHDPIGYPQG SFVRDYLIHE
701: LNIHVSRLVP LRSPEEYDKA LRDGPGKGGV AAVVDERAYI ELFLSNRCEF GIVGQEFTKN GWGFAFPRNS PLAVDVSAAI LQLSENGDMQ RIRDKWLLRK
801: ACSLQGAEIE VDRLELKSFW GLFVVCGVAC VLALAVYTVL MIRQFGQQCP EEAEGSIRRR SSPSARIHSF LSFVKEKEED AKARSSRERQ LEDISANGSS
901: RCN

Arabidopsis Description

GLR3.6Glutamate receptor 3.6 [Source:UniProtKB/Swiss-Prot;Acc:Q84W41]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.