Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400059098 | Potato | golgi | 94.05 | 93.25 |
| PGSC0003DMT400027830 | Potato | plasma membrane | 84.22 | 91.86 |
| VIT_10s0003g00790.t01 | Wine grape | plasma membrane | 48.22 | 48.69 |
| KRH21332 | Soybean | plasma membrane | 45.08 | 44.41 |
| KRH20347 | Soybean | nucleus | 40.76 | 44.35 |
| KRH50147 | Soybean | plasma membrane | 42.49 | 43.72 |
| VIT_10s0003g00760.t01 | Wine grape | plasma membrane | 46.92 | 42.72 |
| KRH21331 | Soybean | plasma membrane | 40.43 | 40.92 |
| KRH21326 | Soybean | plasma membrane | 40.54 | 40.5 |
| GSMUA_Achr2P15450_001 | Banana | plasma membrane | 33.3 | 38.74 |
| GSMUA_Achr4P30920_001 | Banana | plasma membrane | 31.89 | 37.53 |
| Solyc04g078860.2.1 | Tomato | plasma membrane | 30.92 | 34.01 |
| Solyc06g063170.2.1 | Tomato | cytosol | 32.0 | 32.39 |
| Solyc06g063190.2.1 | Tomato | plasma membrane | 32.43 | 30.36 |
| Solyc07g052400.2.1 | Tomato | cytosol | 26.16 | 29.84 |
| Solyc06g063200.1.1 | Tomato | plasma membrane | 31.46 | 29.79 |
| Solyc05g045650.2.1 | Tomato | plasma membrane | 27.78 | 29.3 |
| Solyc06g063210.2.1 | Tomato | mitochondrion, plasma membrane | 30.7 | 29.19 |
| Solyc06g063180.1.1 | Tomato | plasma membrane | 30.16 | 28.79 |
| Solyc08g006500.2.1 | Tomato | extracellular | 29.95 | 28.53 |
| Solyc07g052390.2.1 | Tomato | nucleus | 26.59 | 28.37 |
| Solyc04g082610.2.1 | Tomato | plasma membrane | 28.32 | 28.23 |
| Solyc02g082480.2.1 | Tomato | plasma membrane | 27.35 | 26.41 |
Protein Annotations
| Gene3D:1.10.287.70 | MapMan:24.3.9 | Gene3D:3.40.190.10 | Gene3D:3.40.50.2300 | InterPro:ANF_lig-bd_rcpt | ProteinID:BAL15047.1 |
| UniProt:G5EKN2 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0004970 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035235 | GO:GO:0038023 | InterPro:Iontro_rcpt | InterPro:Iontropic_Glu_rcpt_pln |
| PFAM:PF00060 | PFAM:PF00497 | PFAM:PF01094 | PIRSF:PIRSF037090 | PANTHER:PTHR43891 | PANTHER:PTHR43891:SF14 |
| InterPro:Peripla_BP_I | SMART:SM00079 | SUPFAM:SSF53822 | SUPFAM:SSF53850 | SignalP:SignalP-noTM | InterPro:Solute-binding_3/MltF_N |
| EnsemblPlantsGene:Solyc02g077290.1 | EnsemblPlants:Solyc02g077290.1.1 | TMHMM:TMhelix | UniParc:UPI0002385715 | SEG:seg | : |
Description
Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:G5EKN2]
Coordinates
chr2:+:42273040..42276977
Molecular Weight (calculated)
104457.0 Da
IEP (calculated)
8.741
GRAVY (calculated)
-0.141
Length
925 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIFILKAFL FMSLVTVKAT ANETIKIGAI IDLNSRIGKE QKTGINIAVE NYNHDRRNNK QLITVHFRNT SKDTIQDFFT AEELVERNHV KMIVIGMQTW
101: EETALIADIG KRHQVPIISF VTASYTPELV QLRWPFLVQM TTSSLDQINC TASVVSSYQW RKVIVIYEDD MYSDSSMLAV LTETLKGHGV EVEHQLILPQ
201: FSSLSDPREV VRREVVKLLQ KQSRVFIVLR SSVSTANHLF KEAKEIGLMG RDSAWILADS LADLLDSVDK AFISSIQGAL GIKNHYAEAT KSFRHFKGQF
301: QKIFRSEYPT EDHSEPGIHA LKAYDSITAF ANAVNNLGAK SSNDSVLMKN RILSSNFTGL TGNISFVNGV LSHPPTFRIV NIDGNRYNGL GFWSSMFGFS
401: KVLEAENGEL IGVNGSRVMK FSMVKWPGEL KRVPKGWAMP TDAKPLIIGV PGRTSFEKFV KVETVAETNE MKYTGFCIDL FKEVLKILEK NYTLPYDFEA
501: YDGSYPDLVQ QVINGRYDAI VGDITILAER TKYIEFTQPF AESGLTMVVP VKFDKSKKAW MFLKPFTGNM WVATGSVLVY TMLVVWFMEH QSNPEFRGRW
601: KDQLGTAMWF TFSSLFFAHR ENIKSNYTKT VVVVWLFLVF VLTSSYTASL TSMLTVPRLE PSVKDIGWIK RTNATVGCDG DSFVKDYLRQ VLELQNIKNI
701: SNQDDYPKEL ENGNIKAAFL EIPYQKIFLR EHCNQYVVAG PNYRFGGLAF AFQKGSPLAR DVSEAILTLT QDGTLNRLEE HWFALSKNCD NVDPTGETES
801: LTLGSFWGLY LVSGATSTLC LLFYVYHLFR KSRQLTGAFR DNILHPSTDQ SLWTKTAGII RYNKNDKPIV TLRRVTSARA AGLGVDERAD SRKWHLVSPS
901: DAAQIYDGSS QHPQLAVELG NSRSN
101: EETALIADIG KRHQVPIISF VTASYTPELV QLRWPFLVQM TTSSLDQINC TASVVSSYQW RKVIVIYEDD MYSDSSMLAV LTETLKGHGV EVEHQLILPQ
201: FSSLSDPREV VRREVVKLLQ KQSRVFIVLR SSVSTANHLF KEAKEIGLMG RDSAWILADS LADLLDSVDK AFISSIQGAL GIKNHYAEAT KSFRHFKGQF
301: QKIFRSEYPT EDHSEPGIHA LKAYDSITAF ANAVNNLGAK SSNDSVLMKN RILSSNFTGL TGNISFVNGV LSHPPTFRIV NIDGNRYNGL GFWSSMFGFS
401: KVLEAENGEL IGVNGSRVMK FSMVKWPGEL KRVPKGWAMP TDAKPLIIGV PGRTSFEKFV KVETVAETNE MKYTGFCIDL FKEVLKILEK NYTLPYDFEA
501: YDGSYPDLVQ QVINGRYDAI VGDITILAER TKYIEFTQPF AESGLTMVVP VKFDKSKKAW MFLKPFTGNM WVATGSVLVY TMLVVWFMEH QSNPEFRGRW
601: KDQLGTAMWF TFSSLFFAHR ENIKSNYTKT VVVVWLFLVF VLTSSYTASL TSMLTVPRLE PSVKDIGWIK RTNATVGCDG DSFVKDYLRQ VLELQNIKNI
701: SNQDDYPKEL ENGNIKAAFL EIPYQKIFLR EHCNQYVVAG PNYRFGGLAF AFQKGSPLAR DVSEAILTLT QDGTLNRLEE HWFALSKNCD NVDPTGETES
801: LTLGSFWGLY LVSGATSTLC LLFYVYHLFR KSRQLTGAFR DNILHPSTDQ SLWTKTAGII RYNKNDKPIV TLRRVTSARA AGLGVDERAD SRKWHLVSPS
901: DAAQIYDGSS QHPQLAVELG NSRSN
001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ
Arabidopsis Description
ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.