Factsheet for VIT_10s0003g00790.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
plasma membrane 6
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g00760.t01	Wine grape	plasma membrane	67.25	60.63
PGSC0003DMT400027830	Potato	plasma membrane	47.6	51.42
KRH20347	Soybean	nucleus	45.85	49.41
KRH50147	Soybean	plasma membrane	48.36	49.28
KRH21332	Soybean	plasma membrane	49.89	48.67
Solyc02g077290.1.1	Tomato	nucleus	48.69	48.22
PGSC0003DMT400059098	Potato	golgi	48.91	48.02
KRH21331	Soybean	plasma membrane	47.16	47.26
KRH21326	Soybean	plasma membrane	47.38	46.87
GSMUA_Achr2P15450_001	Banana	plasma membrane	35.26	40.63
GSMUA_Achr4P30920_001	Banana	plasma membrane	33.62	39.19
VIT_19s0014g01830.t01	Wine grape	plasma membrane	30.79	36.72
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	29.48	32.61
VIT_04s0069g00560.t01	Wine grape	plasma membrane	31.33	32.03
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	29.59	31.29
VIT_04s0069g00170.t01	Wine grape	plasma membrane	31.55	31.21
VIT_04s0069g00670.t01	Wine grape	plasma membrane	31.0	30.9
VIT_11s0052g01020.t01	Wine grape	plasma membrane	30.35	30.55
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	18.23	30.09
VIT_04s0069g00380.t01	Wine grape	cytosol	13.32	29.76
VIT_04s0069g00540.t01	Wine grape	plasma membrane	22.93	29.7
VIT_12s0059g02260.t01	Wine grape	plasma membrane	29.37	29.59
VIT_04s0069g00620.t01	Wine grape	plasma membrane	31.88	29.49
VIT_04s0069g00060.t01	Wine grape	plasma membrane	31.22	29.21
VIT_12s0059g02270.t01	Wine grape	plasma membrane	29.37	29.11
VIT_04s0069g00230.t01	Wine grape	plasma membrane	32.31	28.93
VIT_03s0038g03920.t01	Wine grape	plasma membrane	28.82	28.79
VIT_04s0069g00200.t01	Wine grape	cytosol	13.76	28.57
VIT_18s0122g00990.t01	Wine grape	plasma membrane	29.04	28.48
VIT_04s0069g00720.t01	Wine grape	cytosol	18.01	27.64
VIT_07s0031g02170.t01	Wine grape	plasma membrane	28.17	27.56
VIT_19s0014g01760.t01	Wine grape	plasma membrane	32.42	26.64
VIT_19s0014g01770.t01	Wine grape	cytosol	36.14	20.94
VIT_04s0069g00330.t01	Wine grape	plastid	32.42	16.88

Protein Annotations

Gene3D:1.10.287.70	EntrezGene:100260637	wikigene:100260637	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300
EMBL:AM464800	InterPro:ANF_lig-bd_rcpt	ProteinID:CAN63664	ProteinID:CAN63664.1	ProteinID:CCB55655	ProteinID:CCB55655.1
UniProt:F6HM67	EMBL:FN595992	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	EntrezGene:LOC100260637	wikigene:LOC100260637	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094
PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF14	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI00019840F5	ArrayExpress:VIT_10s0003g00790	EnsemblPlantsGene:VIT_10s0003g00790
EnsemblPlants:VIT_10s0003g00790.t01	RefSeq:XP_002272216	RefSeq:XP_002272216.1	SEG:seg	:	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:F6HM67]

Coordinates

chr10:-:2036760..2040965

Molecular Weight (calculated)

103051.0 Da

IEP (calculated)

5.758

GRAVY (calculated)

-0.103

Length

916 amino acids

Sequence
(BLAST)

001: MNVPSNSVNT APKSRFPCSL FIVFLLILSH AYIIAADYKP TNIGAIVDAS SRKGKEEKTA MEIAISRFNR DSKNLQLFLH FGNSTGEPIQ AAFTAQELIK
101: EKEVGVIVGT DTWQEAALVA DVGNRAQVPV LSLAASTITP PLRQIRWPFL TQMGSNVSEQ IRCISAIVGS YHWQRVIVVY EDDAHGGDSG MLAPLSEALQ
201: YFSTEIEYTV VLPPISSLSD PKEAINEELM KLLSIQSRVF IVLKSSPLMA THLFQEARRM GFMARESAWI ITDTISSFLD SIDTSAISYI EGALGIKTYY
301: SKTSRPFLEF SAQFQKMFEN EYPEEDNTKP GIHALRAYDS ISVIANALVR LASDTITPKR LLETILSSNF NGLSGKISFQ GGDQLDSNSL PLRIINLVGK
401: GYKELDFWTQ DLDHPFSREG GEANSSRRTT KVLDGPVIWP GYLKRVPKGW EMPTDEKRLK IGIPANTSFD KFVKVDEAQI DPEKKYTGFC IDIFREVIKI
501: LEQNYSLPYD FHPYDGTYDE LVDRVYTKTY DAVVGDMTIL ANRSRIVEFT QPFAESGLSM ITPVKSREAY KAWLFMKPFT MEMWVVTGVI LIYTMFIVWI
601: LEHQNNPEFQ GSWKDQLGTT LWFTFSSLFF AHKEKINSNI TRVVVVVWLM VVFVLTSSYT ASLSSMLTVQ RLEPNVTDIE WLKVHKLNVG CDGDSFVRKY
701: LEDVLDFKKD NIKNISSQYA YPNEFQKGTI SAAFLELPYE KVFMNRYCKK YTASNPLSRF GGLGFVFQKG SPIAADVSKA ILTLSERGIL QSLEDKWFPS
801: SDECSTTDTT ELSLQNFWAL YVLCGATSTI CFLLFLCRLL LKYFQQNAPS ESAWRRTVEL ANYIHKVEIK IPDRASDFSQ GSNRASSSGS PGWVLVSPSD
901: APEPSEASPP TAIQMI

Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)

001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.