Factsheet for VIT_04s0069g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0069g00200.t01	Wine grape	cytosol	41.16	91.38
VIT_04s0069g00670.t01	Wine grape	plasma membrane	84.07	89.55
VIT_04s0069g00380.t01	Wine grape	cytosol	36.87	88.05
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	49.44	87.21
VIT_04s0069g00560.t01	Wine grape	plasma membrane	79.78	87.17
VIT_04s0069g00230.t01	Wine grape	plasma membrane	85.8	82.11
VIT_04s0069g00170.t01	Wine grape	plasma membrane	76.81	81.21
VIT_04s0069g00540.t01	Wine grape	plasma membrane	53.63	74.26
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	63.43	71.71
VIT_04s0069g00720.t01	Wine grape	cytosol	43.11	70.69
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	58.84	69.57
VIT_04s0069g00620.t01	Wine grape	plasma membrane	67.42	66.67
PGSC0003DMT400067658	Potato	plastid	50.26	57.68
Solyc08g006500.2.1	Tomato	extracellular	55.67	56.13
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	34.93	51.74
GSMUA_Achr7P16350_001	Banana	cytosol, peroxisome, plasma membrane	37.08	49.79
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.13	49.75
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.29	49.57
AT2G29110.2	Thale cress	plasma membrane	47.91	49.47
AT2G29120.1	Thale cress	plasma membrane	47.8	49.16
AT5G27100.1	Thale cress	plasma membrane	45.05	48.95
Bra032072.1-P	Field mustard	plasma membrane	44.74	48.88
Bra032063.1-P	Field mustard	plasma membrane	45.97	48.75
CDY31759	Canola	cytosol, peroxisome, plasma membrane	23.29	48.41
CDY31756	Canola	cytosol, peroxisome, plastid	42.9	48.39
GSMUA_Achr3P04970_001	Banana	plasma membrane	47.19	48.28
CDY00544	Canola	plasma membrane	38.41	48.27
CDX72325	Canola	plasma membrane	33.2	48.22
TraesCS5A01G218900.1	Wheat	plasma membrane	38.2	48.2
Bra040760.1-P	Field mustard	cytosol	41.27	47.98
CDY70035	Canola	cytosol, plasma membrane	39.63	47.96
CDY45595	Canola	plasma membrane	41.88	47.67
CDY31755	Canola	cytosol	44.94	47.67
AT2G24720.1	Thale cress	plasma membrane	44.64	47.5
CDY58212	Canola	cytosol, plasma membrane	40.45	47.48
Bra040761.1-P	Field mustard	cytosol	45.05	47.37
GSMUA_AchrUn_...	Banana	golgi	41.16	47.3
CDY36173	Canola	plasma membrane	38.82	47.15
AT2G29100.2	Thale cress	plasma membrane	45.35	47.13
CDY54213	Canola	plasma membrane	42.8	47.13
Bra023313.1-P	Field mustard	plasma membrane	41.27	47.03
CDY38574	Canola	plasma membrane	46.37	46.95
CDX85724	Canola	plasma membrane	40.96	46.68
CDY51113	Canola	plasma membrane	40.96	46.68
CDY39533	Canola	plasma membrane	46.17	46.55
AT2G24710.3	Thale cress	plasma membrane	43.62	46.46
CDY56837	Canola	plasma membrane	43.51	46.41
VIT_04s0069g00330.t01	Wine grape	plastid	83.25	46.31
TraesCS7B01G242400.1	Wheat	plasma membrane	42.7	46.19
GSMUA_Achr6P01870_001	Banana	cytosol	41.27	46.12
AT4G31710.2	Thale cress	plasma membrane	42.8	45.94
KRH50532	Soybean	plasma membrane	37.9	45.92
CDX73196	Canola	cytosol, peroxisome, plasma membrane	42.7	45.78
AT5G11210.5	Thale cress	plasma membrane	42.9	45.75
CDY50141	Canola	plasma membrane	24.72	45.66
HORVU5Hr1G063420.2	Barley	cytosol, peroxisome, plasma membrane	25.13	45.64
TraesCS7A01G341200.1	Wheat	plasma membrane	41.68	45.59
TraesCS5D01G226500.2	Wheat	cytosol	40.65	45.43
GSMUA_Achr4P02110_001	Banana	cytosol	37.49	45.42
HORVU5Hr1G072250.1	Barley	cytosol, peroxisome, plastid	23.19	45.4
HORVU5Hr1G072170.1	Barley	plasma membrane	36.87	45.24
TraesCS5D01G228000.1	Wheat	plasma membrane	36.47	45.08
KRH50533	Soybean	plasma membrane	36.77	44.89
OQU89536	Sorghum	cytosol	41.37	44.8
TraesCS5D01G225900.1	Wheat	golgi	39.43	44.57
TraesCS5D01G266900.1	Wheat	golgi, plasma membrane	28.8	44.41
GSMUA_Achr9P13570_001	Banana	plasma membrane	41.37	44.41
HORVU5Hr1G063500.1	Barley	plasma membrane	42.08	44.35
Os09t0428300-00	Rice	plasma membrane	39.43	44.27
TraesCS5B01G217800.1	Wheat	plasma membrane	38.51	44.25
Os09t0429000-00	Rice	plasma membrane	42.08	44.16
AT5G11180.2	Thale cress	plasma membrane	43.51	44.05
VIT_11s0052g01020.t01	Wine grape	plasma membrane	40.76	43.85
HORVU5Hr1G063530.5	Barley	plasma membrane	41.06	43.84
TraesCS5D01G227800.1	Wheat	plasma membrane	41.27	43.72
TraesCS5A01G218700.1	Wheat	plasma membrane	40.76	43.51
TraesCS5A01G219800.1	Wheat	plasma membrane	41.06	43.46
TraesCS5A01G218400.1	Wheat	plasma membrane	41.06	43.41
TraesCS5A01G218600.1	Wheat	plasma membrane	40.35	43.26
TraesCS5B01G217000.1	Wheat	mitochondrion, plasma membrane	39.33	43.06
TraesCS5B01G217700.1	Wheat	plasma membrane	40.04	42.94
HORVU5Hr1G063540.6	Barley	plasma membrane	39.84	42.76
TraesCS5D01G226700.3	Wheat	plasma membrane	40.04	42.75
Os09t0429500-00	Rice	plasma membrane	41.16	42.6
TraesCS5D01G226600.1	Wheat	plasma membrane	40.35	42.52
CDY13449	Canola	cytosol	41.57	42.44
TraesCS5D01G226800.1	Wheat	plasma membrane	41.16	42.33
Os09t0428600-00	Rice	plasma membrane	23.39	42.33
Os09t0429400-00	Rice	golgi	40.25	42.18
TraesCS5B01G218900.1	Wheat	plasma membrane	40.76	42.18
TraesCS5B01G257800.1	Wheat	plasma membrane	38.82	42.08
Bra015817.1-P	Field mustard	plasma membrane	43.31	42.02
CDY68132	Canola	plasma membrane	43.31	42.02
TraesCS5D01G266800.1	Wheat	plasma membrane	38.3	41.95
TraesCS5B01G218700.1	Wheat	plasma membrane	39.94	41.91
EER98937	Sorghum	plasma membrane	40.35	41.8
HORVU7Hr1G081410.3	Barley	plasma membrane	24.41	41.78
Os09t0429200-00	Rice	plasma membrane	40.45	41.77
OQU84757	Sorghum	plasma membrane	38.82	41.71
HORVU5Hr1G063480.2	Barley	golgi, plasma membrane	41.47	41.56
HORVU5Hr1G010420.17	Barley	plasma membrane	38.2	41.56
TraesCS5D01G226300.1	Wheat	plasma membrane	40.76	41.52
TraesCS5B01G217200.1	Wheat	mitochondrion, plasma membrane	41.37	41.41
TraesCS5A01G218200.1	Wheat	plasma membrane	40.96	41.38
EER98936	Sorghum	plasma membrane	39.94	41.33
TraesCS5B01G046400.1	Wheat	plasma membrane	37.9	41.31
Os06t0190800-01	Rice	cytosol, plasma membrane	34.52	41.22
TraesCS5A01G042800.1	Wheat	plasma membrane	37.79	41.2
TraesCS5D01G226100.1	Wheat	mitochondrion, plasma membrane	41.16	41.04
TraesCS5A01G218000.1	Wheat	plasma membrane	40.86	40.82
TraesCS5B01G217400.1	Wheat	plasma membrane, plastid	41.27	40.77
Bra023989.1-P	Field mustard	cytosol	40.96	40.71
OQU89534	Sorghum	plasma membrane	37.69	40.5
TraesCS5D01G051300.1	Wheat	golgi	37.08	40.38
Zm00001d020568_P001	Maize	golgi	39.63	40.37
KXG35670	Sorghum	plasma membrane	40.25	40.33
KXG35672	Sorghum	mitochondrion, plasma membrane	39.94	40.31
Zm00001d020563_P001	Maize	plasma membrane	39.12	40.23
TraesCS6D01G330900.1	Wheat	plasma membrane	41.37	40.18
Os02t0787600-01	Rice	golgi	40.45	40.08
HORVU6Hr1G083680.5	Barley	plasma membrane	41.47	40.08
HORVU5Hr1G063440.1	Barley	plasma membrane	40.14	40.02
HORVU5Hr1G063490.1	Barley	golgi, vacuole	17.36	40.0
Os09t0431200-01	Rice	endoplasmic reticulum, extracellular	38.71	39.89
OQU89527	Sorghum	plasma membrane	37.9	39.89
Zm00001d005783_P002	Maize	plasma membrane	39.53	39.69
TraesCS6A01G347900.1	Wheat	plasma membrane	40.86	39.68
KXG19504	Sorghum	golgi, plasma membrane, vacuole	35.14	39.49
HORVU7Hr1G031400.1	Barley	plasma membrane	29.21	39.39
TraesCS6D01G330500.1	Wheat	plasma membrane	40.86	39.33
HORVU6Hr1G083570.16	Barley	plasma membrane	40.86	39.29
TraesCS6B01G381400.1	Wheat	plasma membrane	40.45	39.05
TraesCS2D01G462300.1	Wheat	plasma membrane	38.82	39.01
TraesCS5D01G226400.1	Wheat	plasma membrane	37.79	38.99
TraesCS6A01G347400.1	Wheat	plastid	41.37	38.94
CDY63640	Canola	cytosol	21.55	38.86
TraesCS6B01G380800.1	Wheat	plasma membrane	40.55	38.85
KXG31244	Sorghum	mitochondrion	40.14	38.83
TraesCS5A01G259100.1	Wheat	cytosol, nucleus, plasma membrane	28.91	38.82
TraesCS5A01G218300.1	Wheat	plasma membrane	37.79	38.78
TraesCS5B01G217500.1	Wheat	plasma membrane	37.69	38.76
Zm00001d018332_P001	Maize	plastid	39.33	38.65
TraesCS2D01G025600.1	Wheat	plasma membrane	25.64	38.5
Zm00001d005782_P001	Maize	plasma membrane	38.3	38.27
KXG35671	Sorghum	plasma membrane	38.1	38.06
GSMUA_Achr6P01860_001	Banana	cytosol, peroxisome, plasma membrane	37.39	37.89
TraesCS7B01G057800.1	Wheat	plasma membrane	33.91	37.73
TraesCS3A01G023600.2	Wheat	plasma membrane	34.73	37.69
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	38.82	37.36
Os09t0431100-01	Rice	plasma membrane	35.75	36.65
TraesCS6B01G438400.1	Wheat	plasma membrane	33.71	36.63
TraesCS5B01G217100.1	Wheat	plasma membrane	34.93	36.54
TraesCS5D01G226000.1	Wheat	plasma membrane	34.63	36.33
HORVU5Hr1G063510.1	Barley	golgi, mitochondrion, plasma membrane	37.39	36.06
TraesCS7A01G154100.1	Wheat	plasma membrane	34.42	36.0
HORVU5Hr1G063430.8	Barley	plasma membrane	34.32	35.78
Zm00001d018329_P001	Maize	plasma membrane	35.85	35.1
VIT_12s0059g02270.t01	Wine grape	plasma membrane	32.69	34.63
TraesCS6B01G380900.1	Wheat	plasma membrane	34.01	34.58
VIT_18s0122g00990.t01	Wine grape	plasma membrane	32.79	34.37
VIT_03s0038g03920.t01	Wine grape	plasma membrane	31.87	34.02
VIT_19s0014g01830.t01	Wine grape	plasma membrane	25.43	32.42
VIT_12s0059g02260.t01	Wine grape	plasma membrane	29.83	32.12
VIT_07s0031g02170.t01	Wine grape	plasma membrane	29.93	31.3
VIT_10s0003g00790.t01	Wine grape	plasma membrane	29.21	31.22
VIT_10s0003g00760.t01	Wine grape	plasma membrane	27.99	26.97
VIT_19s0014g01760.t01	Wine grape	plasma membrane	28.5	25.02
VIT_19s0014g01770.t01	Wine grape	cytosol	31.15	19.29
Os09t0428750-01	Rice	mitochondrion	0.1	0.83

Protein Annotations

Gene3D:1.10.287.70	EntrezGene:100264189	wikigene:100264189	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300
UniProt:A5AVQ8	EMBL:AM437340	InterPro:ANF_lig-bd_rcpt	ProteinID:CAN62891	ProteinID:CAN62891.1	ProteinID:CCB48826
ProteinID:CCB48826.1	EMBL:FN595500	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt
InterPro:Iontropic_Glu_rcpt_pln	EntrezGene:LOC100264189	wikigene:LOC100264189	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094
PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF3	InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI000151F8F4	ArrayExpress:VIT_04s0069g00060	EnsemblPlantsGene:VIT_04s0069g00060
EnsemblPlants:VIT_04s0069g00060.t01	RefSeq:XP_002268958	RefSeq:XP_002268958.2	SEG:seg	:	:

Description

Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A5AVQ8]

Coordinates

chr4:+:7892040..7897638

Molecular Weight (calculated)

109181.0 Da

IEP (calculated)

8.139

GRAVY (calculated)

0.013

Length

979 amino acids

Sequence
(BLAST)

001: MAMAQNTTIP VKVGVVLDMD TWLGKMGLSC ISMALSDFYA YHGHYKTRLI PKIRDSKRDV VGAAAAALYL LQNEEVQAII GPASSLQANF VIGLGDKAHV
101: PIISFSATSP SLSSLRSQYF VRATLNDSAQ VPAIRAIVQA FGWRQVVLIY LDNEYGNGVI PYLTDALQEI DTRISYRSVI HPLATDDQIL EELYKLMTMP
201: TRVFIVHMFA PIGPRLFVRA NEIGMMEEGY VWILTDGLTD ILGTLDPSVI DSMQGVLGVK PHVPRSKKLE SFKIRWKREI QQEYPTNESF ELNIFGLWAY
301: DAACGLAMAV EKLGATNFRF QKSNFSRNST DLDTVGVSLI GPNLLQSLLY TRFRGLSGDF QIVNRQLQSS AFEVVNVIGK GERGVGFWTP ENGTVRKLDS
401: TSKPNLGTIV WPGESPSIPK GWVLPTNGKK LRIGVPVTKG FGEFVKVTRD PSSNATKVSG FSIAVFDAVM AALPYAVPYE YIPFQTPDGN PAGDDNDLIY
501: QVYLQKYDAV VGAITILANR SLYVDFTLPY TESGVSMVVP TIDERKENAW VFLKPLTWDL WVTSFCFFVF IGFVIWVLEH RVNKDFRGPR SYQVGTIFWF
601: SFSTLVFAQN ERIVSNLARI VMIVWFFVVL ILTQSYTASL TSMLTVRQLN PTITDTNELI KKGERVGCQY GSFIYEFLIK SMKFEESKLV NYNSTEELDE
701: LFSKGGIAAA FDEIPCIKIF LAKYCSKYTA VGPIYKFDGF GFVFPKGSPL VADVSRKVLS VTEGAKMSQF EKAWFGQIPS CPELTSSVSS NSISLNSFWG
801: LFLIAGVTSF VALITCITIF LHENREALIN LNPPSSRWRK IKAMATLFDE KDLRSHTFRK SDQLPDKQHQ GHGCSYSLAS YTNCPPSPSS LLIPTHSNFA
901: FFSEQGTPSS GHGDPVSPNR PMSPHILFEY ELANINHEQI NKMPCPKILS KGVTINSHIK PESSKCKLNI VENNSRSFS

Best Arabidopsis Sequence Match ( AT5G27100.1 )
(BLAST)

001: MKRENNLVLS LLFFVIVFLM QVGEAQNRIT NVNVGIVNDI GTAYSNMTLL CINMSLSDFY SSHPETQTRL VTTVVDSKND VVTAAAAALD LITNKEVKAI
101: LGPWTSMQAQ FMIEMGQKSQ VPIVTYSATS PSLASIRSQY FFRATYDDSS QVHAIKEIIK LFGWREVAPV YVDDTFGEGI MPRLTDVLQE INVRIPYRTV
201: ISPNATDDEI SVELLRMMTL PTRVFVVHLV ELLASRFFAK ATEIGLMKQG YVWILTNTIT DVLSIMNETE IETMQGVLGV KTYVPRSKEL ENFRSRWTKR
301: FPISDLNVYG LWAYDATTAL ALAIEEAGTS NLTFVKMDAK RNVSELQGLG VSQYGPKLLQ TLSRVRFQGL AGDFQFINGE LQPSVFEIVN VNGQGGRTIG
401: FWMKEYGLFK NVDQKPASKT TFSSWQDRLR PIIWPGDTTS VPKGWEIPTN GKRLQIGVPV NNTFQQFVKA TRDPITNSTI FSGFSIDYFE AVIQAIPYDI
501: SYDFIPFQDG GYDALVYQVY LGKYDAVVAD TTISSNRSMY VDFSLPYTPS GVGLVVPVKD SVRRSSTIFL MPLTLALWLI SLLSFFIIGL VVWVLEHRVN
601: PDFDGPGQYQ LSTIFWFSFS IMVFAPRERV LSFWARVVVI IWYFLVLVLT QSYTASLASL LTTQHLHPTV TNINSLLAKG ESVGYQSSFI LGRLRDSGFS
701: EASLVSYGSP EHCDALLSKG QAEGGVSAVL MEVPYVRIFL GQYCNKYKMV QTPFKVDGLG FVFPIGSPLV ADISRAILKV EESNKANQLE NAWFKPIDES
801: CPDPLTNPDP NPSVSFRQLG FDSFWVLFLV AAIVCTMALL KFVYQFLKEN PNQRNLRVLW EKFNEPDQKS YIKDVTKCQC SSGQGMPKNG QEGANAVNNG
901: N

Arabidopsis Description

GLR2.1Glutamate receptor 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O04660]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.