Factsheet for Zm00001d018329_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018332_P001	Maize	plastid	50.2	50.4
Zm00001d052064_P001	Maize	mitochondrion, plasma membrane	51.2	50.34
GSMUA_Achr6P26740_001	Banana	cytosol, plasma membrane, plastid	30.6	46.29
GSMUA_Achr4P02110_001	Banana	cytosol	36.2	44.8
VIT_04s0069g00560.t01	Wine grape	plasma membrane	35.3	39.4
Bra040758.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.0	38.79
VIT_04s0069g00390.t01	Wine grape	mitochondrion, plasma membrane	31.9	38.53
VIT_04s0069g00670.t01	Wine grape	plasma membrane	35.4	38.52
VIT_04s0069g00620.t01	Wine grape	plasma membrane	38.1	38.48
Solyc08g006500.2.1	Tomato	extracellular	37.2	38.31
CDY31759	Canola	cytosol, peroxisome, plasma membrane	18.0	38.22
CDY50141	Canola	plasma membrane	20.2	38.11
VIT_04s0069g00170.t01	Wine grape	plasma membrane	35.2	38.01
KRH50532	Soybean	plasma membrane	30.3	37.5
VIT_04s0069g00010.t01	Wine grape	mitochondrion, plasma membrane	32.3	37.3
Zm00001d005782_P001	Maize	plasma membrane	36.1	36.84
Bra040760.1-P	Field mustard	cytosol	31.0	36.82
AT2G29110.2	Thale cress	plasma membrane	34.9	36.81
AT2G29100.2	Thale cress	plasma membrane	34.5	36.62
CDY31755	Canola	cytosol	33.6	36.4
VIT_04s0069g00200.t01	Wine grape	cytosol	16.0	36.28
Bra040761.1-P	Field mustard	cytosol	33.7	36.2
CDY31756	Canola	cytosol, peroxisome, plastid	31.4	36.18
CDY70035	Canola	cytosol, plasma membrane	29.2	36.09
VIT_04s0069g00540.t01	Wine grape	plasma membrane	25.5	36.07
KRH50533	Soybean	plasma membrane	28.8	35.91
VIT_04s0069g00060.t01	Wine grape	plasma membrane	35.1	35.85
CDY58212	Canola	cytosol, plasma membrane	29.9	35.85
Zm00001d005783_P002	Maize	plasma membrane	34.9	35.79
Bra018409.1-P	Field mustard	cytosol, nucleus, plasma membrane	33.4	35.76
VIT_04s0069g00260.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	19.6	35.32
AT2G29120.1	Thale cress	plasma membrane	33.5	35.19
VIT_04s0069g00720.t01	Wine grape	cytosol	20.7	34.67
AT5G27100.1	Thale cress	plasma membrane	31.2	34.63
CDY51113	Canola	plasma membrane	29.6	34.46
CDX85724	Canola	plasma membrane	29.6	34.46
CDX72325	Canola	plasma membrane	23.2	34.42
VIT_04s0069g00230.t01	Wine grape	plasma membrane	35.2	34.41
CDY00544	Canola	plasma membrane	26.8	34.4
CDY39533	Canola	plasma membrane	33.4	34.4
VIT_04s0069g00380.t01	Wine grape	cytosol	14.1	34.39
Bra023313.1-P	Field mustard	plasma membrane	29.5	34.34
Zm00001d020568_P001	Maize	golgi	33.0	34.34
PGSC0003DMT400023744	Potato	cytosol	29.9	34.21
CDY38574	Canola	plasma membrane	33.0	34.13
AT5G11210.5	Thale cress	plasma membrane	31.2	33.99
Zm00001d020563_P001	Maize	plasma membrane	31.6	33.19
CDX73196	Canola	cytosol, peroxisome, plasma membrane	30.2	33.08
AT4G31710.2	Thale cress	plasma membrane	30.0	32.89
AT2G24720.1	Thale cress	plasma membrane	30.2	32.83
Bra032072.1-P	Field mustard	plasma membrane	29.3	32.7
CDY54213	Canola	plasma membrane	28.8	32.4
AT5G11180.2	Thale cress	plasma membrane	31.2	32.26
CDY56837	Canola	plasma membrane	29.6	32.24
AT2G24710.3	Thale cress	plasma membrane	29.5	32.1
Bra032063.1-P	Field mustard	plasma membrane	29.1	31.53
Zm00001d018614_P003	Maize	plastid	30.0	31.28
Zm00001d002532_P003	Maize	plasma membrane	29.0	31.15
Zm00001d014456_P001	Maize	plasma membrane	28.7	31.03
CDY45595	Canola	plasma membrane	26.6	30.93
Zm00001d006508_P003	Maize	plasma membrane	28.5	30.88
CDY36173	Canola	plasma membrane	24.8	30.77
Bra015817.1-P	Field mustard	plasma membrane	31.0	30.72
CDY68132	Canola	plasma membrane	31.0	30.72
Zm00001d014458_P001	Maize	plasma membrane	28.1	30.54
Zm00001d018615_P001	Maize	plasma membrane	29.2	30.42
Zm00001d014451_P001	Maize	plasma membrane	28.8	30.41
Zm00001d015007_P003	Maize	plasma membrane	27.4	30.41
Zm00001d054016_P004	Maize	plasma membrane	28.0	29.44
CDY13449	Canola	cytosol	27.0	28.15
Bra023989.1-P	Field mustard	cytosol	27.2	27.61
Zm00001d033769_P001	Maize	golgi, plasma membrane	17.0	26.94
CDY63640	Canola	cytosol	14.0	25.78
VIT_04s0069g00330.t01	Wine grape	plastid	34.9	19.83

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	UniProt:A0A1D6HMT5	InterPro:ANF_lig-bd_rcpt
ProteinID:AQK75625.1	GO:GO:0003674	GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0035235	GO:GO:0038023	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090	PANTHER:PTHR43891	PANTHER:PTHR43891:SF9
InterPro:Peripla_BP_I	SMART:SM00079	SUPFAM:SSF53822	SUPFAM:SSF53850	SignalP:SignalP-noTM	InterPro:Solute-binding_3/MltF_N
TMHMM:TMhelix	UniParc:UPI000220E41E	EnsemblPlantsGene:Zm00001d018329	EnsemblPlants:Zm00001d018329_P001	EnsemblPlants:Zm00001d018329_T001	SEG:seg

Description

Glutamate receptor 2.7

Coordinates

chr5:-:218519848..218523059

Molecular Weight (calculated)

107461.0 Da

IEP (calculated)

5.237

GRAVY (calculated)

-0.053

Length

1000 amino acids

Sequence
(BLAST)

001: MQMRFAATSA SFVLLCLLAA LLGHWPAAAA ETVNVGVILD LASAPGRRWR TSISMAVEDY YATHTNSTTR VDLHFRDSSG DAVAAASAAV DLIRNAKAQA
101: IIDGSRTAAA AEFVARIGDR AHVPVLAFSA APATWTARFS VATAPGDSSQ AAPIAGVLEN FHWRSAVLLH EDSRSGAGIV PALSDALRGA GATVAHRAAV
201: PADASDDRLD AVLYRASAMT ARVFVVHMPF PLALRLFHRA KGAGMMSDGY VWIATSAVGD TGDGDGDALG SDDADAMQGV VSVRQYAPPT SEVSDFARRF
301: KARFQLENNG SQDTTEPTTS TLQAYDTAFA AAAAVEAAGI SGSAFEPPTG GGTELDQLGV SATGEKLLKA VLDTTFEGLA GKFRLLDGQP QTPAYEIVNF
401: AADGLTTVGF WTTKSGVSQE FDAGSGEGLK KVSFPGAGES DTRIPDGWAF SPVERSLVIA VPVKHGFQQF VQVYNDTTSD RTMVSGYCID VFEAAIKALP
501: YPVYYQYAPY YGIGNASSSS YDQMVELIPE EKADAVVGDV SITVVRMGDA DFTMPYTESG WSMVVAVQAQ TATGMFFFLK PLTPALWLVS LAAFIFTGFV
601: IWVIEHRINP EFRGTPLQQF GIIFHYAFST LVFAHRENVV SNLSKFLMVI WVFAVLILTS SYTASLTSML TVQKLRPAVT DVNDLIDNGD YVGYQEGSFV
701: HGELLQMKFD PSRLRSYSTP AEYADALSKG SAGGGVAAVF DEVPYLKVFL SQYCDGYTMS GPVYKGTGLG FAFARGSPMA TEVSRAIVGL TEGDDMDLIE
801: RKWFGVPGSC VDGVDADNAS LTLWNFSGLF LITAVAATLV LLAYLVTFIY RERHEVRAAA EPGSGSVSLK RFRAWLQHYD RKDMSAPHFR QQQGWSDSPS
901: TNGGSSHGRK REGAEQEDAT ATRDFGGPRA SPLSDHSRMD SVSRSPLERK GSNEFRTPFE QRMGEAAAAS GERRSSTPER KQSLKFAQDT EERKKLPLSP

Best Arabidopsis Sequence Match ( AT2G29100.1 )
(BLAST)

001: MKTNNTFLSY FVCGFLLMGV GLGQNQTSEI KVGVVLDLNT TFSKICLTSI KMAVSDFYAD HPNYLTRLTL HVRDSMEDTV QASAAALDLI KTEQVSAIIG
101: PINSMQADFM IKLANKTQVP TITFSATSPL LTSIKSPYFV RATIDDSSQV RAIASIFKFF RWRRVVAIYV DNEFGEGFMP FLFDALQDVE VKRSVIPPEA
201: IDDEIQKELR KLMERQARVF VVHMESSLAL RVFQIARDIG MMEEGYVWLM TNGMTHMMRH INNGRSLNTI EGVLGVRSHV PKSKELGDFR LRWKRTFEKE
301: NPSMRDDLNV FALWAYDSIT ALAKAVEKAN TKSLWYDNGS TLSKNRTDLG NVGVSLYGPS LQKAFSEVRF NGLAGEFKLI DGQLQSPKFE IINFVGNEER
401: IIGFWTPRDG LMDATSSNKK TLGPVIWPGK SKIVPKGWEI PGKKLRVGVP MKKGFFDFVK VTINPITNKK TPTGYAIEIF EAALKELPYL VIPEYVSFES
501: PNNYNNLVYQ VYDKTWDAVV GDITITANRS LYADFTLPFT ESGVSMMVPV RDNENKDTWV FLEPWSLELW VTTGCFFVFI GFVVWLFEHR VNTDFRGPPQ
601: YQIGTSLWFS FSTMVFAHRE NVVSNLARFV VVVWCFVVLV LTQSYTASLT SFLTVQSLQP TVTNVNDLIK NRDCVGYQGG AFVKDILLGL GFHEDQLKPF
701: DSAKDADDLL SKGKSKGIAA AFDEVAYLKA ILSQSCSKYV MVEPTFKTGG FGFAFPKNSP LTGEFSRAIL NLTQNNVTQQ IEDRWFPKKN DCPDPMTALS
801: SNRLNLSSFL GLFLIAGTAI SFSLLVFVAL FLYEHRHTLG DDSEDSLWRK LKFLFKIFDE KDMNSHTFKN SAIHNISSPM THKTPSPSTV QITPWPQSPS
901: QNREFELRRV SFSPSEERFT TQPIIHHEDG ESDIECRVEQ

Arabidopsis Description

ATGLR2.9Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.