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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d006508_P003
Zm00001d014451_P001
Zm00001d014456_P001
Zm00001d014458_P001
Zm00001d018614_P003
Zm00001d018615_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05200.1 Zm00001d006508_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014451_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014456_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d014458_P001 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018614_P003 AT1G05200.1 23590882
AT1G05200.1 Zm00001d018615_P001 AT1G05200.1 23590882
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90229 Sorghum plasma membrane 93.7 93.09
Zm00001d014451_P001 Maize plasma membrane 84.57 82.15
Zm00001d014456_P001 Maize plasma membrane 78.37 77.95
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 63.15 64.63
Solyc05g045650.2.1 Tomato plasma membrane 57.39 60.21
VIT_12s0059g02270.t01 Wine grape plasma membrane 59.02 58.77
Solyc07g052400.2.1 Tomato cytosol 51.63 58.57
KRH25388 Soybean plasma membrane 56.85 56.6
PGSC0003DMT400065539 Potato plasma membrane 57.72 56.43
KRH26793 Soybean plasma membrane 58.04 56.39
KRH56121 Soybean plasma membrane 56.85 56.3
PGSC0003DMT400013497 Potato plasma membrane 58.04 56.27
Zm00001d006508_P003 Maize plasma membrane 56.41 56.23
KRH22559 Soybean plasma membrane 57.5 55.86
CDY06165 Canola plasma membrane 51.85 54.76
Zm00001d018614_P003 Maize plastid 56.09 53.81
Bra015398.1-P Field mustard plasma membrane 55.22 53.42
AT1G05200.1 Thale cress plasma membrane 55.65 53.39
AT2G32390.5 Thale cress plasma membrane 55.22 53.31
CDY49512 Canola plasma membrane 55.22 53.31
CDY46839 Canola plasma membrane 55.0 53.21
CDY10044 Canola plasma membrane 54.24 53.14
Bra005589.1-P Field mustard plasma membrane 53.7 52.28
Bra032480.1-P Field mustard plasma membrane 54.02 51.72
Zm00001d018615_P001 Maize plasma membrane 53.26 51.04
Zm00001d002532_P003 Maize plasma membrane 51.09 50.48
Zm00001d015007_P003 Maize plasma membrane 49.02 50.06
CDY66698 Canola plasma membrane 45.87 47.47
CDY48271 Canola plastid 38.04 47.36
Zm00001d054016_P004 Maize plasma membrane 48.59 47.0
CDX84735 Canola plasma membrane 45.33 46.96
Zm00001d033769_P001 Maize golgi, plasma membrane 31.63 46.12
CDY12211 Canola plasma membrane 43.15 44.66
GSMUA_Achr5P00750_001 Banana mitochondrion 64.02 31.46
Zm00001d005782_P001 Maize plasma membrane 31.74 29.8
Zm00001d018332_P001 Maize plastid 32.07 29.62
Zm00001d020568_P001 Maize golgi 29.89 28.62
Zm00001d052064_P001 Maize mitochondrion, plasma membrane 31.2 28.22
Zm00001d018329_P001 Maize plasma membrane 30.54 28.1
Zm00001d005783_P002 Maize plasma membrane 29.46 27.79
Zm00001d020563_P001 Maize plasma membrane 27.93 27.0
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300UniProt:A0A1D6GTJ2InterPro:ANF_lig-bd_rcpt
ProteinID:AQK66317.1GO:GO:0003674GO:GO:0004871GO:GO:0004970GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0035235GO:GO:0038023InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_pln
PFAM:PF00060PFAM:PF00497PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891
PANTHER:PTHR43891:SF17InterPro:Peripla_BP_ISMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850SignalP:SignalP-noTM
InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI000845052EEnsemblPlantsGene:Zm00001d014458EnsemblPlants:Zm00001d014458_P001EnsemblPlants:Zm00001d014458_T001
SEG:seg:::::
Description
Glutamate receptor 3.4
Coordinates
chr5:+:48260780..48266573
Molecular Weight (calculated)
101124.0 Da
IEP (calculated)
6.359
GRAVY (calculated)
0.087
Length
920 amino acids
Sequence
(BLAST)
001: MGAAQLVILF LALATAVGAP PSEVAVGALF TYDSTIGRAA KLAIELAVDD VNSDGKVLPR TQLNLVPQDT NCSGFLGTIE ALQLMEKNVV ALIGPQSSGI
101: GHVISHVVNE LHVPLLSFAA TDPTLSASEY PYFIRTTISD YFQMNAIASI VDYYQWKRVT AIFVDDDYGR GGVEALGDAL ALKRAKISYK AAIPPNSNTD
201: VINDVLFKAN MMESRVMIVH VNPDTGMRIF SVAKNLQMMA SGYVWIVTDW LAAVLDSSAN RGLKDMSHIQ GLIVLRQHIP ESEAKDKFIS KWNNVAHNRN
301: ITSGLNSYGF YAYDSVWAVA RAVDKFLSNG QQINFSTDPR LEDSNGSTLH LSSLKIFDGG EQMLHQLLLT NFTGVTGPVQ FDSEHNLVRP AYDILNVVGS
401: GSRLIGYWSN YSGLSVAAPE TLYQMPRNTS TSAQQLHDVV WPGDSTTKPK GWVFPNTGLP LRVGVPIKAS FKELVSGRGD NMSGYCIEIF NAAIKLLPYP
501: VPCQFITIGD GTKNPSYIDI IRMVAANSLD AAVGDFAIVR NGTQLAEYTQ PYIESGLVIV APVKHVTSSA WAFLEPFTLE MWCVTVALFI LVGIVVWLLE
601: HRTNEEFRGS PRRQVITMLW FSFSTMFFSH RENTVSTLGR FVLIIWLFVV LIITSSYTAS LTSILTVQQL STGITGIDSL VSSSLPIGYQ AGKFTKRYLT
701: ENFNVPLSRL VPLNSIQEYA DALNRGPKNG GVAAIVDEKP YIDIFLSNYC SFRIVGEEFT KEGWGFAFQR DSPLAADLST AILQLSESGQ LQRIHDEWFS
801: RSSCSSDDSE VGATRLGLGS FWGLFLVCAL ICLFALLVFF IRVCRQYNQY SSSEAAGEPS TAAADPVLRQ RRPSRLGSFK DLIQFVDKKE EEIKKTMKRR
901: SGEKDSQAAG FSYAQSVASA
Best Arabidopsis Sequence Match ( AT1G05200.1 )
(BLAST)
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.