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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • plastid 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66698 Canola plasma membrane 94.82 94.71
CDY48271 Canola plastid 70.61 84.84
Bra005589.1-P Field mustard plasma membrane 82.43 77.46
CDY12211 Canola plasma membrane 76.69 76.6
AT2G32390.5 Thale cress plasma membrane 79.5 74.08
CDY49512 Canola plasma membrane 70.61 65.79
CDY06165 Canola plasma membrane 64.19 65.44
CDY46839 Canola plasma membrane 69.93 65.3
CDY10044 Canola plasma membrane 68.36 64.64
Solyc05g045650.2.1 Tomato plasma membrane 54.39 55.07
VIT_12s0059g02270.t01 Wine grape plasma membrane 56.42 54.22
KRH26793 Soybean plasma membrane 56.87 53.33
Solyc07g052400.2.1 Tomato cytosol 48.65 53.27
PGSC0003DMT400065539 Potato plasma membrane 56.42 53.24
KRH22559 Soybean plasma membrane 56.31 52.8
PGSC0003DMT400013497 Potato plasma membrane 56.08 52.48
KRH25388 Soybean plasma membrane 54.5 52.38
KRH56121 Soybean plasma membrane 54.28 51.88
GSMUA_Achr9P11690_001 Banana plasma membrane 49.77 49.5
GSMUA_Achr9P30180_001 Banana mitochondrion, plasma membrane 49.66 49.05
GSMUA_Achr9P02750_001 Banana plasma membrane 49.44 47.87
CDX75491 Canola cytosol, plasma membrane, plastid 10.92 47.55
GSMUA_Achr6P00460_001 Banana plasma membrane 49.32 47.35
CDY68928 Canola extracellular, plasma membrane 27.7 46.15
CDY70557 Canola extracellular, plasma membrane 27.48 45.78
TraesCS2D01G265700.1 Wheat plasma membrane 47.64 45.68
TraesCS2B01G285400.1 Wheat plasma membrane 47.64 45.58
TraesCS2A01G257200.1 Wheat plasma membrane 47.52 45.43
Zm00001d014458_P001 Maize plasma membrane 46.96 45.33
EER90229 Sorghum plasma membrane 47.18 45.25
KXG20640 Sorghum plasma membrane 47.3 45.16
Zm00001d014451_P001 Maize plasma membrane 47.97 44.98
HORVU1Hr1G086120.3 Barley plasma membrane 47.18 44.91
KXG20638 Sorghum plasma membrane 48.54 44.9
TraesCS2B01G246200.1 Wheat plasma membrane 45.27 44.87
TraesCS1D01G398500.1 Wheat plasma membrane 47.18 44.77
Os06t0680500-01 Rice cytosol, plasma membrane 44.71 44.61
TraesCS1A01G390300.2 Wheat plasma membrane 47.07 44.56
EER97313 Sorghum plasma membrane 46.28 44.48
Zm00001d014456_P001 Maize plasma membrane 46.28 44.43
TraesCS7A01G455200.1 Wheat plasma membrane 46.4 44.11
Zm00001d006508_P003 Maize plasma membrane 45.83 44.1
HORVU7Hr1G104490.2 Barley golgi, plasma membrane 46.4 44.06
TraesCS2D01G226400.1 Wheat plasma membrane 45.83 43.95
TraesCS1B01G418500.1 Wheat plasma membrane 46.28 43.86
TraesCS7B01G355500.1 Wheat plasma membrane 46.06 43.74
HORVU2Hr1G045730.6 Barley plasma membrane 45.38 43.52
TraesCS2A01G220700.1 Wheat plasma membrane 45.38 43.43
CDY65624 Canola plasma membrane 41.89 42.76
TraesCS7D01G444100.2 Wheat plasma membrane 46.4 42.65
Zm00001d018614_P003 Maize plastid 45.95 42.54
Os07t0103100-01 Rice plasma membrane 45.61 42.36
EER95720 Sorghum plastid 46.4 42.34
CDY24327 Canola plasma membrane 43.47 42.32
CDX75490 Canola extracellular, plasma membrane, vacuole 27.48 41.92
CDY52597 Canola plasma membrane 43.02 41.89
CDX73718 Canola plasma membrane 42.0 41.86
CDX78008 Canola plasma membrane 42.0 41.86
Zm00001d018615_P001 Maize plasma membrane 44.93 41.56
CDX80728 Canola cytosol 11.26 41.32
CDY35797 Canola plasma membrane 38.18 41.24
CDX69127 Canola plasma membrane 42.12 41.01
CDX76331 Canola plasma membrane 41.89 40.88
CDY71348 Canola golgi, plasma membrane 12.05 40.38
EER95721 Sorghum plastid 43.13 39.04
CDX95758 Canola cytosol 17.68 38.57
CDY15337 Canola plasma membrane 36.6 36.35
CDY48270 Canola plasma membrane 37.61 36.23
CDY12210 Canola plasma membrane 37.5 36.16
CDX84734 Canola plasma membrane 37.61 36.07
CDY66699 Canola plasma membrane 37.05 35.53
CDY58212 Canola cytosol, plasma membrane 23.31 24.82
CDY36173 Canola plasma membrane 22.52 24.81
CDY54213 Canola plasma membrane 24.77 24.75
CDY45595 Canola plasma membrane 23.87 24.65
CDY70035 Canola cytosol, plasma membrane 22.18 24.35
CDY31755 Canola cytosol 24.89 23.94
GSMUA_Achr5P00750_001 Banana mitochondrion 50.34 23.88
CDY39533 Canola plasma membrane 26.01 23.79
CDY00544 Canola plasma membrane 20.72 23.62
CDY31756 Canola cytosol, peroxisome, plastid 22.97 23.5
CDX72325 Canola plasma membrane 17.79 23.44
CDY38574 Canola plasma membrane 25.45 23.37
CDX85724 Canola plasma membrane 22.52 23.28
CDY51113 Canola plasma membrane 22.41 23.17
CDX73196 Canola cytosol, peroxisome, plasma membrane 23.76 23.11
CDY56837 Canola plasma membrane 23.65 22.88
CDY63640 Canola cytosol 13.96 22.84
CDY68132 Canola plasma membrane 25.0 22.0
CDY13449 Canola cytosol 22.41 20.75
CDY31759 Canola cytosol, peroxisome, plasma membrane 10.7 20.17
CDY50141 Canola plasma membrane 11.26 18.87
CDY72467 Canola cytosol 0.11 1.35
Protein Annotations
Gene3D:1.10.287.70MapMan:24.3.9Gene3D:3.40.190.10Gene3D:3.40.50.2300GO:A0A078D6K4InterPro:ANF_lig-bd_rcpt
EnsemblPlants:CDX84735ProteinID:CDX84735ProteinID:CDX84735.1GO:GO:0003674GO:GO:0004871GO:GO:0004970
GO:GO:0005215GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987
GO:GO:0016020GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00142020001InterPro:Iontro_rcptInterPro:Iontropic_Glu_rcpt_plnPFAM:PF00497
PFAM:PF01094PIRSF:PIRSF037090PRINTS:PR01176PANTHER:PTHR43891PANTHER:PTHR43891:SF12InterPro:Peripla_BP_I
SMART:SM00079SUPFAM:SSF53822SUPFAM:SSF53850InterPro:Solute-binding_3/MltF_NTMHMM:TMhelixUniParc:UPI0004EE23BE
SEG:seg:::::
Description
BnaA03g14950D
Coordinates
chrLK031838:+:994899..998797
Molecular Weight (calculated)
99012.6 Da
IEP (calculated)
7.247
GRAVY (calculated)
-0.201
Length
888 amino acids
Sequence
(BLAST)
001: MYQVVMTPFV FLSGPFFSFD VDFNGQGAGR ESFLRNSSFS SRPSSVNVGA LFTYDSFIGR AAKPAFMVAI EDVNADQNIL RGTKLNIVFH DSNCSGFVGT
101: MGALQVMENK VVAAIGPQSS GIGHLISHVA NELHVPLLSF AATDPTLSSL QYPYFLRTTQ NDYFQMNAVA DFVSYCRWRE VVAIFVDDEY GRNGISVLGD
201: ALAKKRAKIS YKAAFRPGAD NSSLRDLLVS VNLMESRIFV VHVNPDSGLN VFSVAKSLGM MGSGYVWIAT DWLLTALDSR LDPNTMDLLQ GVVAFRHYTP
301: ESNEKRRFKA RWKSLRSKES SGGDDGFNSY AMYAYDNVWL VARALDVFFS QGNRVTFSSD PNLRKTNGTN IKFSALSVFN EGERFLQVIH DMNYTGLTGP
401: IQFDLEKNRI NPAYDVVNIN SRDPKRVGYW SNHTGFSVEP PETFYSKPPN TSAEHQRLNE IIWPGGVTKP PRGWVFPDNG EPLKIGVPNR VSYKNYASEE
501: KNQLGVKGYC IRLPIDIFEA AVELLPYPVP RTYILYGDGK RNPSYDNLVN EVASNNFDVA VGDITIVTNR TKFVDFTQPF MESGLVVPSF GFLNTGLTKS
601: FVDLLGVKSS QFSGLASQQC SSLTVRTPLQ TGTYKTSSFR LTSRIEGMDS LITSSEPIGV QDGTFAYKYL VNELNIAPSR IIPLKNEEDY LSALQLGPRG
701: GGVAAIVDEL PYIKALLSNS NCEFRTVGQE FTRTGWGFAF QRDSPLAVDM STAILQLSEE GKLEKIRKKW LTYSHECSVQ IADTENYQLS VQSFWGLFLI
801: CGIVWFIALT LFCWKVFWQC QGLRPEEESD ELRVSEEASS SRSGRSLRAG SFKDLIKVVD KREVEIKEML KQKSSKKLKA SQSSAETP
Best Arabidopsis Sequence Match ( AT2G32390.4 )
(BLAST)
001: MGFFVMIRDV SMGFMLLCIS ALWVLPIQGA GRESFSRNSS SSSLPSSVNV GALFTYDSFI GRAAKLAFVA AIEDINADQS ILRGTKLNIV FQDTNCSGFV
101: GTMGALQLME NKVVAAIGPQ SSGIGHIISH VANELHVPFL SFAATDPTLS SLQYPYFLRT TQNDYFQMNA ITDFVSYFRW REVVAIFVDD EYGRNGISVL
201: GDALAKKRAK ISYKAAFPPG ADNSSISDLL ASVNLMESRI FVVHVNPDSG LNIFSVAKSL GMMGSGYVWI TTDWLLTALD SMEPLDPRAL DLLQGVVAFR
301: HYTPESDNKR QFKGRWKNLR FKESLKSDDG FNSYALYAYD SVWLVARALD VFFSQGNTVT FSNDPSLRNT NDSGIKLSKL HIFNEGERFL QVILEMNYTG
401: LTGQIEFNSE KNRINPAYDI LNIKSTGPLR VGYWSNHTGF SVAPPETLYS KPSNTSAKDQ RLNEIIWPGE VIKPPRGWVF PENGKPLKIG VPNRVSYKNY
501: ASKDKNPLGV KGFCIDIFEA AIQLLPYPVP RTYILYGDGK KNPSYDNLIS EVAANIFDVA VGDVTIITNR TKFVDFTQPF IESGLVVVAP VKGAKSSPWS
601: FLKPFTIEMW AVTGALFLFV GAVIWILEHR FNEEFRGPPR RQIITVFWFS FSTMFFSHSM HTITFKIIRK HQREETLGSF LLLPRSQGVL FFFLC
Arabidopsis Description
GLR3.5Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.