Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os06t0680500-01 | |
| Os07t0103100-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05200.1 | Os06t0680500-01 | AT1G05200.1 | 23590882 |
| AT1G05200.1 | Os07t0103100-01 | AT1G05200.1 | 23590882 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G104490.2 | Barley | golgi, plasma membrane | 80.22 | 76.36 |
| TraesCS7A01G455200.1 | Wheat | plasma membrane | 79.66 | 75.91 |
| TraesCS7B01G355500.1 | Wheat | plasma membrane | 79.21 | 75.4 |
| TraesCS7D01G444100.2 | Wheat | plasma membrane | 79.44 | 73.19 |
| GSMUA_Achr9P30180_001 | Banana | mitochondrion, plasma membrane | 62.7 | 62.07 |
| Solyc05g045650.2.1 | Tomato | plasma membrane | 59.1 | 59.98 |
| Solyc07g052400.2.1 | Tomato | cytosol | 53.93 | 59.19 |
| VIT_12s0059g02270.t01 | Wine grape | plasma membrane | 59.33 | 57.14 |
| CDY06165 | Canola | plasma membrane | 54.61 | 55.8 |
| KRH26793 | Soybean | plasma membrane | 58.65 | 55.12 |
| PGSC0003DMT400013497 | Potato | plasma membrane | 58.76 | 55.11 |
| KRH22559 | Soybean | plasma membrane | 58.54 | 55.02 |
| KRH25388 | Soybean | plasma membrane | 57.08 | 54.98 |
| PGSC0003DMT400065539 | Potato | plasma membrane | 57.98 | 54.84 |
| KRH56121 | Soybean | plasma membrane | 56.85 | 54.47 |
| CDY46839 | Canola | plasma membrane | 56.63 | 53.0 |
| Bra015398.1-P | Field mustard | plasma membrane | 56.63 | 53.0 |
| CDY49512 | Canola | plasma membrane | 56.4 | 52.68 |
| CDY10044 | Canola | plasma membrane | 55.39 | 52.5 |
| AT1G05200.1 | Thale cress | plasma membrane | 56.29 | 52.24 |
| Os07t0103100-01 | Rice | plasma membrane | 55.51 | 51.67 |
| AT2G32390.5 | Thale cress | plasma membrane | 54.94 | 51.31 |
| Bra005589.1-P | Field mustard | plasma membrane | 53.6 | 50.48 |
| Bra032480.1-P | Field mustard | plasma membrane | 54.27 | 50.26 |
| Os02t0117500-01 | Rice | plasma membrane | 50.11 | 47.25 |
| CDY66698 | Canola | plasma membrane | 45.51 | 45.56 |
| CDX84735 | Canola | plasma membrane | 44.61 | 44.71 |
| CDY12211 | Canola | plasma membrane | 44.38 | 44.43 |
| CDY48271 | Canola | plastid | 36.18 | 43.57 |
| Os04t0585200-02 | Rice | extracellular | 26.29 | 43.33 |
| Os06t0190800-01 | Rice | cytosol, plasma membrane | 29.33 | 31.83 |
| GSMUA_Achr5P00750_001 | Banana | mitochondrion | 64.16 | 30.5 |
| Os09t0428300-00 | Rice | plasma membrane | 29.66 | 30.28 |
| Os09t0429000-00 | Rice | plasma membrane | 31.69 | 30.23 |
| Os09t0429400-00 | Rice | golgi | 31.69 | 30.19 |
| Os09t0429500-00 | Rice | plasma membrane | 31.46 | 29.6 |
| Os02t0787600-01 | Rice | golgi | 32.7 | 29.45 |
| Os09t0431200-01 | Rice | endoplasmic reticulum, extracellular | 30.56 | 28.63 |
| Os09t0431100-01 | Rice | plasma membrane | 29.21 | 27.23 |
| Os09t0429200-00 | Rice | plasma membrane | 28.76 | 27.0 |
| Os09t0428600-00 | Rice | plasma membrane | 15.73 | 25.88 |
| Os09t0428750-01 | Rice | mitochondrion | 0.11 | 0.83 |
| Os02t0117600-01 | Rice | plastid | 0.22 | 0.83 |
Protein Annotations
| Gene3D:1.10.287.70 | MapMan:24.3.9 | Gene3D:3.40.190.10 | Gene3D:3.40.50.2300 | InterPro:ANF_lig-bd_rcpt | ProteinID:BAF20286.1 |
| ProteinID:BAS99140.1 | GO:GO:0003674 | GO:GO:0004871 | GO:GO:0004930 | GO:GO:0004970 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007186 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0035235 | GO:GO:0038023 |
| InterPro:Iontro_rcpt | InterPro:Iontropic_Glu_rcpt_pln | EnsemblPlantsGene:Os06g0680500 | EnsemblPlants:Os06t0680500-01 | PFAM:PF00060 | PFAM:PF00497 |
| PFAM:PF01094 | PIRSF:PIRSF037090 | PANTHER:PTHR43891 | PANTHER:PTHR43891:SF17 | InterPro:Peripla_BP_I | UniProt:Q0DA37 |
| SMART:SM00079 | SUPFAM:SSF53822 | SUPFAM:SSF53850 | InterPro:Solute-binding_3/MltF_N | TMHMM:TMhelix | UniParc:UPI0000E1291A |
| SEG:seg | : | : | : | : | : |
Description
Glutamate receptor homolog 3.5, GLUTAMATE RECEPTOR-LIKE 3.3Similar to Glutamate receptor 3.4 precursor (Ligand-gated ion channel 3.4) (AtGLR4). Splice isoform 2. (Os06t0680500-01)
Coordinates
chr6:+:28345366..28350758
Molecular Weight (calculated)
98887.1 Da
IEP (calculated)
5.202
GRAVY (calculated)
-0.020
Length
890 amino acids
Sequence
(BLAST)
(BLAST)
001: CGDDQGQWVG DVNADRTVLA GTTLSLISQD TNCSGFLGTI EALQLMEKNV VAVIGPQSSG IGHVISHVVN ELHVPLLSFA ATDPTLSASE YPYFLRSTMS
101: DYFQMHAVAS IVDYYQWKEV TAIFVDDDYG RGAVAALSDA LALSRARISY KAAVPPNSNA ATINDVLFRA NMMESRVFVV HVNPDAGMRI FSIANKLRMM
201: DSGYVWIVTD WLAAVMDSSM SGDLKTMSYM QGLIVLRQHF PDSETKREFI SKWNNVARNR SIASGLNSYG FYAYDSVWIV ARAIDQLLDN GEEINFSADP
301: RLHDSMNSTL RLSALKLFDS GEQLLQQLLL TNFTGLTGQL QFDSDRNLVR PAYDILNIGG SVPHLIGYWS NYSGLSVAAP EILYEKQPNT STSAQRLKNV
401: VWPGHSASKP KGWVFPNNGQ PLRVGVPNKP SFKELMSRDT GPDNVTGYCI EIFNAAIKLL PYPVPCQFIV IGDGLKNPNY DDIINMVAAN SLDAAVGDFA
501: IVRNRTKIAE FSQPYIESGL VIVVPVKEAS SSAWAFLKPF TLEMWCVTGV LFIFVGIVVW ILEHRTNEEF RGSPRRQMIT IFWFSFSTMF FAHRQNTVSA
601: LGRFVLIIWL FVVLIINSSY TASLTSILTV QQLATGITGL DSLLSSALPI GYQAGKFTRN YLIEELNVPE SHLVPLNTID EYADALNRGP KDGGVAAIVD
701: EMPYIEIFLS YHCNFRIVGQ EFTKEGWGFA FQRDSPLAAD MSTAILQLSE SGQLQRIHDE WFSRSSCSSD DSEMGATRLG LRSFWGLFLM CALICVFALV
801: MFFARVCWQY SKYSGSEEPD EPKDDSAGTA EIAAEAVAEM QRRRPKRLGS FKELMQFVDK KEEEVRKSMK RRPSEKDNQG VGSSDAQSVA
101: DYFQMHAVAS IVDYYQWKEV TAIFVDDDYG RGAVAALSDA LALSRARISY KAAVPPNSNA ATINDVLFRA NMMESRVFVV HVNPDAGMRI FSIANKLRMM
201: DSGYVWIVTD WLAAVMDSSM SGDLKTMSYM QGLIVLRQHF PDSETKREFI SKWNNVARNR SIASGLNSYG FYAYDSVWIV ARAIDQLLDN GEEINFSADP
301: RLHDSMNSTL RLSALKLFDS GEQLLQQLLL TNFTGLTGQL QFDSDRNLVR PAYDILNIGG SVPHLIGYWS NYSGLSVAAP EILYEKQPNT STSAQRLKNV
401: VWPGHSASKP KGWVFPNNGQ PLRVGVPNKP SFKELMSRDT GPDNVTGYCI EIFNAAIKLL PYPVPCQFIV IGDGLKNPNY DDIINMVAAN SLDAAVGDFA
501: IVRNRTKIAE FSQPYIESGL VIVVPVKEAS SSAWAFLKPF TLEMWCVTGV LFIFVGIVVW ILEHRTNEEF RGSPRRQMIT IFWFSFSTMF FAHRQNTVSA
601: LGRFVLIIWL FVVLIINSSY TASLTSILTV QQLATGITGL DSLLSSALPI GYQAGKFTRN YLIEELNVPE SHLVPLNTID EYADALNRGP KDGGVAAIVD
701: EMPYIEIFLS YHCNFRIVGQ EFTKEGWGFA FQRDSPLAAD MSTAILQLSE SGQLQRIHDE WFSRSSCSSD DSEMGATRLG LRSFWGLFLM CALICVFALV
801: MFFARVCWQY SKYSGSEEPD EPKDDSAGTA EIAAEAVAEM QRRRPKRLGS FKELMQFVDK KEEEVRKSMK RRPSEKDNQG VGSSDAQSVA
001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT
Arabidopsis Description
GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.