Factsheet for AT1G05200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 7
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015398.1-P	Field mustard	plasma membrane	86.65	87.38
CDY49512	Canola	plasma membrane	86.34	86.88
CDY46839	Canola	plasma membrane	86.13	86.86
CDY06165	Canola	plasma membrane	77.58	85.42
CDY10044	Canola	plasma membrane	82.9	84.66
Bra032480.1-P	Field mustard	plasma membrane	83.42	83.25
AT2G32390.5	Thale cress	plasma membrane	75.81	76.29
VIT_12s0059g02270.t01	Wine grape	plasma membrane	64.65	67.1
Solyc05g045650.2.1	Tomato	plasma membrane	60.69	66.36
Solyc07g052400.2.1	Tomato	cytosol	55.47	65.6
KRH25388	Soybean	plasma membrane	61.84	64.18
PGSC0003DMT400065539	Potato	plasma membrane	62.88	64.08
PGSC0003DMT400013497	Potato	plasma membrane	62.77	63.44
KRH56121	Soybean	plasma membrane	61.42	63.4
KRH26793	Soybean	plasma membrane	62.57	63.36
KRH22559	Soybean	plasma membrane	62.04	62.83
GSMUA_Achr9P11690_001	Banana	plasma membrane	56.62	60.81
GSMUA_Achr9P02750_001	Banana	plasma membrane	56.62	59.21
GSMUA_Achr9P30180_001	Banana	mitochondrion, plasma membrane	54.95	58.62
GSMUA_Achr6P00460_001	Banana	plasma membrane	55.58	57.62
Os06t0680500-01	Rice	cytosol, plasma membrane	52.24	56.29
KXG20638	Sorghum	plasma membrane	56.2	56.15
Zm00001d014451_P001	Maize	plasma membrane	55.37	56.07
EER97313	Sorghum	plasma membrane	53.81	55.84
HORVU7Hr1G104490.2	Barley	golgi, plasma membrane	54.43	55.83
TraesCS7A01G455200.1	Wheat	plasma membrane	54.33	55.78
TraesCS2D01G265700.1	Wheat	plasma membrane	53.81	55.72
Zm00001d014458_P001	Maize	plasma membrane	53.39	55.65
Zm00001d006508_P003	Maize	plasma membrane	53.49	55.58
TraesCS2B01G285400.1	Wheat	plasma membrane	53.7	55.5
HORVU1Hr1G086120.3	Barley	plasma membrane	53.91	55.41
TraesCS7B01G355500.1	Wheat	plasma membrane	54.01	55.4
EER90229	Sorghum	plasma membrane	53.49	55.4
TraesCS2A01G257200.1	Wheat	plasma membrane	53.6	55.33
TraesCS1A01G390300.2	Wheat	plasma membrane	53.91	55.12
TraesCS1D01G398500.1	Wheat	plasma membrane	53.7	55.02
KXG20640	Sorghum	plasma membrane	52.87	54.52
TraesCS2B01G246200.1	Wheat	plasma membrane	50.89	54.46
TraesCS1B01G418500.1	Wheat	plasma membrane	53.18	54.43
TraesCS2D01G226400.1	Wheat	plasma membrane	52.45	54.32
HORVU2Hr1G045730.6	Barley	plasma membrane	52.14	54.0
TraesCS7D01G444100.2	Wheat	plasma membrane	54.33	53.93
Zm00001d014456_P001	Maize	plasma membrane	51.82	53.73
TraesCS2A01G220700.1	Wheat	plasma membrane	51.62	53.34
Zm00001d018614_P003	Maize	plastid	52.45	52.45
Os07t0103100-01	Rice	plasma membrane	51.82	51.99
EER95720	Sorghum	plastid	52.66	51.9
AT3G51480.1	Thale cress	plasma membrane	47.97	50.94
AT2G17260.1	Thale cress	plasma membrane	48.7	50.49
AT4G35290.2	Thale cress	plasma membrane	47.97	50.44
AT1G42540.2	Thale cress	plasma membrane	49.01	50.38
Zm00001d018615_P001	Maize	plasma membrane	49.74	49.69
EER95721	Sorghum	plastid	48.18	47.09
AT2G32400.1	Thale cress	plasma membrane	41.4	43.11
AT2G24720.1	Thale cress	plasma membrane	30.03	31.3
AT2G24710.3	Thale cress	plasma membrane	29.09	30.36
AT2G29110.2	Thale cress	plasma membrane	29.93	30.27
AT2G29100.2	Thale cress	plasma membrane	29.72	30.25
AT4G31710.2	Thale cress	plasma membrane	28.36	29.82
AT5G27100.1	Thale cress	plasma membrane	27.95	29.74
AT2G29120.1	Thale cress	plasma membrane	29.41	29.62
AT5G11210.5	Thale cress	plasma membrane	28.15	29.41
AT5G11180.2	Thale cress	plasma membrane	28.36	28.13
GSMUA_Achr5P00750_001	Banana	mitochondrion	54.85	28.1
AT5G48410.1	Thale cress	plasma membrane	24.5	27.33

Protein Annotations

Gene3D:1.10.287.70	MapMan:24.3.9	Gene3D:3.40.190.10	Gene3D:3.40.50.2300	EntrezGene:839268	ProteinID:AAB71458.1
ProteinID:AEE27803.1	ProteinID:AEE27804.1	EMBL:AF167355	EMBL:AK118206	InterPro:ANF_lig-bd_rcpt	ProteinID:ANM58387.1
ProteinID:ANM58390.1	ArrayExpress:AT1G05200	EnsemblPlantsGene:AT1G05200	RefSeq:AT1G05200	TAIR:AT1G05200	RefSeq:AT1G05200-TAIR-G
EnsemblPlants:AT1G05200.1	TAIR:AT1G05200.1	Symbol:ATGLR3.4	EMBL:AY072070	EMBL:AY438620	GO:GO:0003674
GO:GO:0004871	GO:GO:0004970	GO:GO:0005215	GO:GO:0005262	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008066
GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009611	GO:GO:0009628
GO:GO:0009719	GO:GO:0009987	GO:GO:0015276	GO:GO:0016020	GO:GO:0016021	GO:GO:0019722
GO:GO:0034220	GO:GO:0035235	GO:GO:0038023	GO:GO:0070417	GO:GO:0070588	GO:GO:0071230
GO:GO:0071260	GO:GO:0071311	InterPro:Iontro_rcpt	InterPro:Iontropic_Glu_rcpt_pln	RefSeq:NP_001030971.1	RefSeq:NP_001320828.1
RefSeq:NP_001320831.1	RefSeq:NP_172012.2	PFAM:PF00060	PFAM:PF00497	PFAM:PF01094	PIRSF:PIRSF037090
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PRINTS:PR01176	PANTHER:PTHR43891
PANTHER:PTHR43891:SF12	InterPro:Peripla_BP_I	UniProt:Q53YX3	UniProt:Q8GXJ4	SMART:SM00079	SUPFAM:SSF53822
SUPFAM:SSF53850	InterPro:Solute-binding_3/MltF_N	TMHMM:TMhelix	UniParc:UPI00000A6EF5	SEG:seg	:

Description

GLR3.4Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:Q53YX3]

Coordinates

chr1:+:1505186..1509152

Molecular Weight (calculated)

107213.0 Da

IEP (calculated)

8.357

GRAVY (calculated)

-0.070

Length

959 amino acids

Sequence
(BLAST)

001: MGFLVMIREV SMAKAIRVVL LCVSVLWVVP KECACRSNFS RNSSSSSSSS LRPLRQRPSS VNVGALFTYD SFIGRAAKPA VKAAMDDVNA DQSVLKGIKL
101: NIIFQDSNCS GFIGTMGALQ LMENKVVAAI GPQSSGIAHM ISYVANELHV PLLSFGATDP TLSSLQFPYF LRTTQNDYFQ MHAIADFLSY SGWRQVIAIF
201: VDDECGRNGI SVLGDVLAKK RSRISYKAAI TPGADSSSIR DLLVSVNLME SRVFVVHVNP DSGLNVFSVA KSLGMMASGY VWIATDWLPT AMDSMEHVDS
301: DTMDLLQGVV AFRHYTIESS VKRQFMARWK NLRPNDGFNS YAMYAYDSVW LVARALDVFF RENNNITFSN DPNLHKTNGS TIQLSALSVF NEGEKFMKII
401: LGMNHTGVTG PIQFDSDRNR VNPAYEVLNL EGTAPRTVGY WSNHSGLSVV HPETLYSRPP NTSTANQRLK GIIYPGEVTK PPRGWVFPNN GKPLRIGVPN
501: RVSYTDYVSK DKNPPGVRGY CIDVFEAAIE LLPYPVPRTY ILYGDGKRNP SYDNLVNEVV ADNFDVAVGD ITIVTNRTRY VDFTQPFIES GLVVVAPVKE
601: AKSSPWSFLK PFTIEMWAVT GGFFLFVGAM VWILEHRFNQ EFRGPPRRQL ITIFWFSFST MFFSHRENTV SSLGRFVLII WLFVVLIINS SYTASLTSIL
701: TIRQLTSRIE GIDSLVTSNE PIGVQDGTFA RNYLINELNI LPSRIVPLKD EEQYLSALQR GPNAGGVAAI VDELPYIEVL LTNSNCKFRT VGQEFTRTGW
801: GFAFQRDSPL AVDMSTAILQ LSEEGELEKI HRKWLNYKHE CSMQISNSED SQLSLKSFWG LFLICGITCF MALTVFFWRV FWQYQRLLPE SADEERAGEV
901: SEPSRSGRGS RAPSFKELIK VVDKREAEIK EILKQKSSKK LKSTQSAAGT SQSQHGEIT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.